RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 TTBK1Q5TCY1 1321 aaPredicted RBP16.08■□□□□ 0.16
CHD2-207ENST00000626782 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
CHD2-207ENST00000626782 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
CHD2-207ENST00000626782 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
CHD2-207ENST00000626782 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
CHD2-207ENST00000626782 SAMD9Q5K651 1589 aa15.98■□□□□ 0.15
CHD2-207ENST00000626782 HRCP23327 699 aa15.98■□□□□ 0.15
CHD2-207ENST00000626782 FBLN2P98095 1184 aa15.97■□□□□ 0.15
CHD2-207ENST00000626782 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
CHD2-207ENST00000626782 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
CHD2-207ENST00000626782 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
CHD2-207ENST00000626782 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
CHD2-207ENST00000626782 MAGI1Q96QZ7 1491 aaPredicted RBP15.93■□□□□ 0.14
CHD2-207ENST00000626782 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
CHD2-207ENST00000626782 IQGAP2Q13576 1575 aa15.92■□□□□ 0.14
CHD2-207ENST00000626782 APLP2Q06481 763 aa15.91■□□□□ 0.14
CHD2-207ENST00000626782 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
CHD2-207ENST00000626782 TIAM1Q13009 1591 aa15.9■□□□□ 0.14
CHD2-207ENST00000626782 SYNJ2O15056 1496 aa15.9■□□□□ 0.14
CHD2-207ENST00000626782 CFAP43Q8NDM7 1665 aa15.88■□□□□ 0.13
CHD2-207ENST00000626782 MAP3K1Q13233 1512 aa15.87■□□□□ 0.13
CHD2-207ENST00000626782 FYCO1Q9BQS8 1478 aa15.85■□□□□ 0.13
CHD2-207ENST00000626782 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
CHD2-207ENST00000626782 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
CHD2-207ENST00000626782 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
CHD2-207ENST00000626782 UGGT2Q9NYU1 1516 aa15.84■□□□□ 0.13
CHD2-207ENST00000626782 KIAA0586Q9BVV6 1533 aa15.83■□□□□ 0.12
CHD2-207ENST00000626782 CHD1O14646 1710 aa15.83■□□□□ 0.12
CHD2-207ENST00000626782 FMN1Q68DA7 1419 aa15.83■□□□□ 0.12
CHD2-207ENST00000626782 LRRC9Q6ZRR7 1453 aa15.81■□□□□ 0.12
CHD2-207ENST00000626782 DISP1Q96F81 1524 aa15.79■□□□□ 0.12
CHD2-207ENST00000626782 NUP160Q12769 1436 aa15.78■□□□□ 0.12
CHD2-207ENST00000626782 KIAA0556O60303 1618 aa15.77■□□□□ 0.12
CHD2-207ENST00000626782 RRBP1Q9P2E9 1410 aaKnown RBP15.76■□□□□ 0.11
CHD2-207ENST00000626782 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
CHD2-207ENST00000626782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
CHD2-207ENST00000626782 HNRNPUL2Q1KMD3 747 aaKnown RBP15.7■□□□□ 0.1
CHD2-207ENST00000626782 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
CHD2-207ENST00000626782 JPH4Q96JJ6 628 aa15.7■□□□□ 0.1
CHD2-207ENST00000626782 MAGI3Q5TCQ9 1506 aa15.69■□□□□ 0.1
CHD2-207ENST00000626782 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
CHD2-207ENST00000626782 CCNB3Q8WWL7 1395 aa15.67■□□□□ 0.1
CHD2-207ENST00000626782 EPRSP07814 1512 aaKnown RBP15.65■□□□□ 0.1
CHD2-207ENST00000626782 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
CHD2-207ENST00000626782 CCDC18Q5T9S5 1454 aa15.63■□□□□ 0.09
CHD2-207ENST00000626782 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
CHD2-207ENST00000626782 RAPGEF6Q8TEU7 1601 aa15.62■□□□□ 0.09
CHD2-207ENST00000626782 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
CHD2-207ENST00000626782 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
CHD2-207ENST00000626782 CLASP1Q7Z460 1538 aa15.61■□□□□ 0.09
CHD2-207ENST00000626782 EHBP1L1Q8N3D4 1523 aa15.61■□□□□ 0.09
CHD2-207ENST00000626782 MTUS2Q5JR59 1369 aa15.6■□□□□ 0.09
CHD2-207ENST00000626782 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
CHD2-207ENST00000626782 CCER1Q8TC90 406 aaPredicted RBP15.59■□□□□ 0.09
CHD2-207ENST00000626782 ARHGEF11O15085 1522 aa15.59■□□□□ 0.09
CHD2-207ENST00000626782 NCOA2Q15596 1464 aa15.59■□□□□ 0.09
CHD2-207ENST00000626782 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
CHD2-207ENST00000626782 SUPT6HQ7KZ85 1726 aaKnown RBP15.58■□□□□ 0.09
CHD2-207ENST00000626782 SHROOM2Q13796 1616 aa15.58■□□□□ 0.09
CHD2-207ENST00000626782 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
CHD2-207ENST00000626782 CARMIL2Q6F5E8 1435 aa15.57■□□□□ 0.08
CHD2-207ENST00000626782 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
CHD2-207ENST00000626782 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
CHD2-207ENST00000626782 ABCA8O94911 1581 aa15.53■□□□□ 0.08
CHD2-207ENST00000626782 MYOM3Q5VTT5 1437 aa15.51■□□□□ 0.07
CHD2-207ENST00000626782 ITGAEP38570 1179 aa15.51■□□□□ 0.07
CHD2-207ENST00000626782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHD2-207ENST00000626782 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
CHD2-207ENST00000626782 PTPRGP23470 1445 aa15.47■□□□□ 0.07
CHD2-207ENST00000626782 PTPN23Q9H3S7 1636 aa15.46■□□□□ 0.07
CHD2-207ENST00000626782 PTPRKQ15262 1439 aa15.44■□□□□ 0.06
CHD2-207ENST00000626782 KIF14Q15058 1648 aa15.44■□□□□ 0.06
CHD2-207ENST00000626782 ATP10BO94823 1461 aa15.43■□□□□ 0.06
CHD2-207ENST00000626782 DHX57Q6P158 1386 aaKnown RBP15.43■□□□□ 0.06
CHD2-207ENST00000626782 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
CHD2-207ENST00000626782 TCOF1Q13428 1488 aaKnown RBP15.42■□□□□ 0.06
CHD2-207ENST00000626782 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
CHD2-207ENST00000626782 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
CHD2-207ENST00000626782 SETD5Q9C0A6 1442 aa15.39■□□□□ 0.05
CHD2-207ENST00000626782 MIA2Q96PC5 1412 aa15.38■□□□□ 0.05
CHD2-207ENST00000626782 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
CHD2-207ENST00000626782 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
CHD2-207ENST00000626782 ABCC2Q92887 1545 aa15.34■□□□□ 0.05
CHD2-207ENST00000626782 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
CHD2-207ENST00000626782 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
CHD2-207ENST00000626782 ITSN2Q9NZM3 1697 aa15.33■□□□□ 0.04
CHD2-207ENST00000626782 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.04
CHD2-207ENST00000626782 MAPKBP1O60336 1514 aa15.33■□□□□ 0.04
CHD2-207ENST00000626782 HFM1A2PYH4 1435 aa15.32■□□□□ 0.04
CHD2-207ENST00000626782 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
CHD2-207ENST00000626782 NAIPQ13075 1403 aa15.31■□□□□ 0.04
CHD2-207ENST00000626782 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
CHD2-207ENST00000626782 CLSPNQ9HAW4 1339 aa15.29■□□□□ 0.04
CHD2-207ENST00000626782 GCC2Q8IWJ2 1684 aa15.29■□□□□ 0.04
CHD2-207ENST00000626782 PLEKHD1A6NEE1 506 aa15.28■□□□□ 0.04
CHD2-207ENST00000626782 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
CHD2-207ENST00000626782 DAPK1P53355 1430 aa15.27■□□□□ 0.03
CHD2-207ENST00000626782 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
CHD2-207ENST00000626782 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
CHD2-207ENST00000626782 KDM6BO15054 1643 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms