RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	RUSC2	Q8N2Y8	1516 aa		44.16	■■■■■ 4.66
R3HDM4-208	ENST00000626716	CUL7	Q14999	1698 aa		44.03	■■■■■ 4.64
R3HDM4-208	ENST00000626716	KIAA0586	Q9BVV6	1533 aa		44.03	■■■■■ 4.64
R3HDM4-208	ENST00000626716	NPM1	P06748	294 aa	Known RBP eCLIP	43.93	■■■■■ 4.62
R3HDM4-208	ENST00000626716	KIF13A	Q9H1H9	1805 aa		43.9	■■■■■ 4.62
R3HDM4-208	ENST00000626716	CARMIL1	Q5VZK9	1371 aa		43.89	■■■■■ 4.62
R3HDM4-208	ENST00000626716	AEBP2	Q6ZN18	517 aa	Predicted RBP	43.82	■■■■■ 4.61
R3HDM4-208	ENST00000626716	ADCY10	Q96PN6	1610 aa		43.77	■■■■■ 4.6
R3HDM4-208	ENST00000626716	FAM69C	Q0P6D2	419 aa		43.77	■■■■■ 4.6
R3HDM4-208	ENST00000626716	ABCC10	Q5T3U5	1492 aa		43.74	■■■■■ 4.59
R3HDM4-208	ENST00000626716	MAPKBP1	O60336	1514 aa		43.73	■■■■■ 4.59
R3HDM4-208	ENST00000626716	PTPRG	P23470	1445 aa		43.66	■■■■■ 4.58
R3HDM4-208	ENST00000626716	CARMIL2	Q6F5E8	1435 aa		43.61	■■■■■ 4.57
R3HDM4-208	ENST00000626716	DIP2B	Q9P265	1576 aa		43.58	■■■■■ 4.57
R3HDM4-208	ENST00000626716	TTBK1	Q5TCY1	1321 aa	Predicted RBP	43.57	■■■■■ 4.57
R3HDM4-208	ENST00000626716	TNIK	Q9UKE5	1360 aa		43.56	■■■■■ 4.56
R3HDM4-208	ENST00000626716	IQGAP2	Q13576	1575 aa		43.55	■■■■■ 4.56
R3HDM4-208	ENST00000626716	RAPGEF2	Q9Y4G8	1499 aa		43.45	■■■■■ 4.55
R3HDM4-208	ENST00000626716	ABCC2	Q92887	1545 aa		43.38	■■■■■ 4.54
R3HDM4-208	ENST00000626716	DISP1	Q96F81	1524 aa		43.37	■■■■■ 4.53
R3HDM4-208	ENST00000626716	TSPOAP1	O95153	1857 aa		43.34	■■■■■ 4.53
R3HDM4-208	ENST00000626716	UHRF1BP1L	A0JNW5	1464 aa		43.31	■■■■■ 4.52
R3HDM4-208	ENST00000626716	UACA	Q9BZF9	1416 aa		43.3	■■■■■ 4.52
R3HDM4-208	ENST00000626716	UGGT2	Q9NYU1	1516 aa		43.29	■■■■■ 4.52
R3HDM4-208	ENST00000626716	ASXL2	Q76L83	1435 aa		43.25	■■■■■ 4.51
R3HDM4-208	ENST00000626716	PLB1	Q6P1J6	1458 aa		43.25	■■■■■ 4.51
R3HDM4-208	ENST00000626716	KDM6B	O15054	1643 aa		43.22	■■■■■ 4.51
R3HDM4-208	ENST00000626716	KIAA0556	O60303	1618 aa		43.14	■■■■■ 4.5
R3HDM4-208	ENST00000626716	GLI2	P10070	1586 aa		43.12	■■■■■ 4.49
R3HDM4-208	ENST00000626716	KDM5B	Q9UGL1	1544 aa		43.11	■■■■■ 4.49
R3HDM4-208	ENST00000626716	CTTNBP2	Q8WZ74	1663 aa		43.05	■■■■■ 4.48
R3HDM4-208	ENST00000626716	ZCCHC11	Q5TAX3	1644 aa	Known RBP	42.99	■■■■■ 4.47
R3HDM4-208	ENST00000626716	PPRC1	Q5VV67	1664 aa	Known RBP	42.98	■■■■■ 4.47
R3HDM4-208	ENST00000626716	EPRS	P07814	1512 aa	Known RBP	42.98	■■■■■ 4.47
R3HDM4-208	ENST00000626716	PRX	Q9BXM0	1461 aa		42.98	■■■■■ 4.47
R3HDM4-208	ENST00000626716	GOLGA3	Q08378	1498 aa		42.96	■■■■■ 4.47
R3HDM4-208	ENST00000626716	KDM4F	A0A1W2PPD8	638 aa		42.9	■■■■■ 4.46
R3HDM4-208	ENST00000626716	MAP3K4	Q9Y6R4	1608 aa		42.86	■■■■■ 4.45
R3HDM4-208	ENST00000626716	WDR7	Q9Y4E6	1490 aa		42.81	■■■■■ 4.44
R3HDM4-208	ENST00000626716	TEX14	Q8IWB6	1497 aa		42.79	■■■■■ 4.44
R3HDM4-208	ENST00000626716	ABCA8	O94911	1581 aa		42.77	■■■■■ 4.44
R3HDM4-208	ENST00000626716	COL17A1	Q9UMD9	1497 aa	Predicted RBP	42.74	■■■■■ 4.43
R3HDM4-208	ENST00000626716	CSRNP3	Q8WYN3	585 aa		42.72	■■■■■ 4.43
R3HDM4-208	ENST00000626716	FAM9A	Q8IZU1	332 aa	Predicted RBP	42.7	■■■■■ 4.43
R3HDM4-208	ENST00000626716	KCNH8	Q96L42	1107 aa		42.68	■■■■■ 4.42
R3HDM4-208	ENST00000626716	P3H3	Q8IVL6	736 aa		42.64	■■■■■ 4.42
R3HDM4-208	ENST00000626716	CD109	Q6YHK3	1445 aa		42.6	■■■■■ 4.41
R3HDM4-208	ENST00000626716	CFAP43	Q8NDM7	1665 aa		42.55	■■■■■ 4.4
R3HDM4-208	ENST00000626716	MAGI3	Q5TCQ9	1506 aa		42.54	■■■■■ 4.4
R3HDM4-208	ENST00000626716	ARID3C	A6NKF2	412 aa		42.49	■■■■■ 4.39
R3HDM4-208	ENST00000626716	ADGRL1	O94910	1474 aa		42.48	■■■■■ 4.39
R3HDM4-208	ENST00000626716	ATP10B	O94823	1461 aa		42.47	■■■■■ 4.39
R3HDM4-208	ENST00000626716	EEA1	Q15075	1411 aa		42.46	■■■■■ 4.39
R3HDM4-208	ENST00000626716	SAMD9	Q5K651	1589 aa		42.44	■■■■■ 4.38
R3HDM4-208	ENST00000626716	RANGAP1	P46060	587 aa	Predicted RBP	42.3	■■■■■ 4.36
R3HDM4-208	ENST00000626716	RAPGEF6	Q8TEU7	1601 aa		42.3	■■■■■ 4.36
R3HDM4-208	ENST00000626716	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	42.26	■■■■■ 4.36
R3HDM4-208	ENST00000626716	HNRNPUL2	Q1KMD3	747 aa	Known RBP	42.26	■■■■■ 4.36
R3HDM4-208	ENST00000626716	ARAP3	Q8WWN8	1544 aa		42.22	■■■■■ 4.35
R3HDM4-208	ENST00000626716	ABCA9	Q8IUA7	1624 aa		42.21	■■■■■ 4.35
R3HDM4-208	ENST00000626716	FHOD3	Q2V2M9	1422 aa		42.18	■■■■■ 4.34
R3HDM4-208	ENST00000626716	PHLDB1	Q86UU1	1377 aa		42.17	■■■■■ 4.34
R3HDM4-208	ENST00000626716	NUP153	P49790	1475 aa	Known RBP	42.16	■■■■■ 4.34
R3HDM4-208	ENST00000626716	KIF21B	O75037	1637 aa		42.09	■■■■■ 4.33
R3HDM4-208	ENST00000626716	PLEKHD1	A6NEE1	506 aa		42.05	■■■■■ 4.32
R3HDM4-208	ENST00000626716	NEO1	Q92859	1461 aa		42.04	■■■■■ 4.32
R3HDM4-208	ENST00000626716	EFCAB5	A4FU69	1503 aa		42.01	■■■■■ 4.32
R3HDM4-208	ENST00000626716	RAPGEF3	O95398	923 aa		42.01	■■■■■ 4.32
R3HDM4-208	ENST00000626716	HECW2	Q9P2P5	1572 aa		41.89	■■■■■ 4.3
R3HDM4-208	ENST00000626716	UBTF	P17480	764 aa	Known RBP	41.89	■■■■■ 4.3
R3HDM4-208	ENST00000626716	CHIC1	Q5VXU3	224 aa		41.86	■■■■■ 4.29
R3HDM4-208	ENST00000626716	EHMT2	Q96KQ7	1210 aa		41.86	■■■■■ 4.29
R3HDM4-208	ENST00000626716	FRMPD1	Q5SYB0	1578 aa		41.79	■■■■■ 4.28
R3HDM4-208	ENST00000626716	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	41.79	■■■■■ 4.28	5e-6	■□□□□ 9.5
R3HDM4-208	ENST00000626716	AKNA	Q7Z591	1439 aa		41.77	■■■■■ 4.28
R3HDM4-208	ENST00000626716	FANCA	O15360	1455 aa		41.74	■■■■■ 4.27
R3HDM4-208	ENST00000626716	DENND4B	O75064	1496 aa	Predicted RBP	41.74	■■■■■ 4.27
R3HDM4-208	ENST00000626716	CDK13	Q14004	1512 aa	Known RBP	41.73	■■■■■ 4.27
R3HDM4-208	ENST00000626716	ADAMTSL3	P82987	1691 aa		41.71	■■■■■ 4.27
R3HDM4-208	ENST00000626716	ARID4B	Q4LE39	1312 aa	Predicted RBP	41.7	■■■■■ 4.27
R3HDM4-208	ENST00000626716	ATP1B4	Q9UN42	357 aa	Predicted RBP	41.7	■■■■■ 4.27
R3HDM4-208	ENST00000626716	CFAP74	Q9C0B2	1584 aa		41.7	■■■■■ 4.27
R3HDM4-208	ENST00000626716	FMN1	Q68DA7	1419 aa		41.69	■■■■■ 4.27
R3HDM4-208	ENST00000626716	TTC37	Q6PGP7	1564 aa		41.68	■■■■■ 4.26
R3HDM4-208	ENST00000626716	RICTOR	Q6R327	1708 aa		41.66	■■■■■ 4.26
R3HDM4-208	ENST00000626716	PTPRM	P28827	1452 aa		41.65	■■■■■ 4.26
R3HDM4-208	ENST00000626716	ARHGAP35	Q9NRY4	1499 aa		41.65	■■■■■ 4.26
R3HDM4-208	ENST00000626716	ILDR1	Q86SU0	546 aa	Predicted RBP	41.64	■■■■■ 4.26
R3HDM4-208	ENST00000626716	BCORL1	Q5H9F3	1711 aa		41.61	■■■■■ 4.25
R3HDM4-208	ENST00000626716	CDK11A	Q9UQ88	783 aa	Predicted RBP	41.58	■■■■■ 4.25
R3HDM4-208	ENST00000626716	ARHGEF40	Q8TER5	1519 aa		41.58	■■■■■ 4.25
R3HDM4-208	ENST00000626716	HECW1	Q76N89	1606 aa		41.58	■■■■■ 4.25
R3HDM4-208	ENST00000626716	PLCH2	O75038	1416 aa		41.57	■■■■■ 4.25
R3HDM4-208	ENST00000626716	ZMYM4	Q5VZL5	1548 aa		41.5	■■■■■ 4.23
R3HDM4-208	ENST00000626716	MADD	Q8WXG6	1647 aa		41.5	■■■■■ 4.23
R3HDM4-208	ENST00000626716	SCAPER	Q9BY12	1400 aa		41.48	■■■■■ 4.23
R3HDM4-208	ENST00000626716	MAGI2	Q86UL8	1455 aa		41.47	■■■■■ 4.23
R3HDM4-208	ENST00000626716	EFCAB2	Q5VUJ9	269 aa		41.46	■■■■■ 4.23
R3HDM4-208	ENST00000626716	ZFYVE16	Q7Z3T8	1539 aa		41.44	■■■■■ 4.22
R3HDM4-208	ENST00000626716	YEATS2	Q9ULM3	1422 aa		41.43	■■■■■ 4.22

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms