RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 RAPGEF2Q9Y4G8 1499 aa33.6■■■□□ 2.97
PNKP-219ENST00000626274 KIAA0586Q9BVV6 1533 aa33.58■■■□□ 2.97
PNKP-219ENST00000626274 JPH4Q96JJ6 628 aa33.56■■■□□ 2.96
PNKP-219ENST00000626274 ERCC6L2Q5T890 1561 aa33.52■■■□□ 2.96
PNKP-219ENST00000626274 EEA1Q15075 1411 aa33.51■■■□□ 2.95
PNKP-219ENST00000626274 PRG4Q92954 1404 aaPredicted RBP33.48■■■□□ 2.95
PNKP-219ENST00000626274 PRXQ9BXM0 1461 aa33.47■■■□□ 2.95
PNKP-219ENST00000626274 CSRNP3Q8WYN3 585 aa33.46■■■□□ 2.95
PNKP-219ENST00000626274 IQGAP2Q13576 1575 aa33.4■■■□□ 2.94
PNKP-219ENST00000626274 FAM9AQ8IZU1 332 aaPredicted RBP33.34■■■□□ 2.93
PNKP-219ENST00000626274 CTTNBP2Q8WZ74 1663 aa33.33■■■□□ 2.93
PNKP-219ENST00000626274 CARMIL2Q6F5E8 1435 aa33.23■■■□□ 2.91
PNKP-219ENST00000626274 UGGT2Q9NYU1 1516 aa33.22■■■□□ 2.91
PNKP-219ENST00000626274 KIF21BO75037 1637 aa33.16■■■□□ 2.9
PNKP-219ENST00000626274 DISP1Q96F81 1524 aa33.14■■■□□ 2.9
PNKP-219ENST00000626274 TNIKQ9UKE5 1360 aa33.11■■■□□ 2.89
PNKP-219ENST00000626274 PTPRGP23470 1445 aa33.1■■■□□ 2.89
PNKP-219ENST00000626274 KIAA0556O60303 1618 aa33.07■■■□□ 2.88
PNKP-219ENST00000626274 GOLGA3Q08378 1498 aa33.05■■■□□ 2.88
PNKP-219ENST00000626274 TTBK1Q5TCY1 1321 aaPredicted RBP33.02■■■□□ 2.88
PNKP-219ENST00000626274 ADCY10Q96PN6 1610 aa32.98■■■□□ 2.87
PNKP-219ENST00000626274 TRHP20396 242 aaPredicted RBP32.94■■■□□ 2.86
PNKP-219ENST00000626274 NPM1P06748 294 aaKnown RBP eCLIP32.91■■■□□ 2.86
PNKP-219ENST00000626274 EHMT2Q96KQ7 1210 aa32.89■■■□□ 2.86
PNKP-219ENST00000626274 UBTFP17480 764 aaKnown RBP32.88■■■□□ 2.85
PNKP-219ENST00000626274 UACAQ9BZF9 1416 aa32.87■■■□□ 2.85
PNKP-219ENST00000626274 SAMD9Q5K651 1589 aa32.85■■■□□ 2.85
PNKP-219ENST00000626274 UHRF1BP1LA0JNW5 1464 aa32.85■■■□□ 2.85
PNKP-219ENST00000626274 P3H3Q8IVL6 736 aa32.81■■■□□ 2.84
PNKP-219ENST00000626274 ABCC2Q92887 1545 aa32.81■■■□□ 2.84
PNKP-219ENST00000626274 RANGAP1P46060 587 aaPredicted RBP32.8■■■□□ 2.84
PNKP-219ENST00000626274 MAPKBP1O60336 1514 aa32.77■■■□□ 2.84
PNKP-219ENST00000626274 PLB1Q6P1J6 1458 aa32.74■■■□□ 2.83
PNKP-219ENST00000626274 EFCAB5A4FU69 1503 aa32.72■■■□□ 2.83
PNKP-219ENST00000626274 ABCA8O94911 1581 aa32.72■■■□□ 2.83
PNKP-219ENST00000626274 KDM5BQ9UGL1 1544 aa32.68■■■□□ 2.82
PNKP-219ENST00000626274 KIF13AQ9H1H9 1805 aa32.65■■■□□ 2.82
PNKP-219ENST00000626274 FHOD3Q2V2M9 1422 aa32.65■■■□□ 2.82
PNKP-219ENST00000626274 ZCCHC11Q5TAX3 1644 aaKnown RBP32.63■■■□□ 2.81
PNKP-219ENST00000626274 ABCC10Q5T3U5 1492 aa32.61■■■□□ 2.81
PNKP-219ENST00000626274 ASXL2Q76L83 1435 aa32.58■■■□□ 2.81
PNKP-219ENST00000626274 DIP2BQ9P265 1576 aa32.57■■■□□ 2.8
PNKP-219ENST00000626274 RAPGEF6Q8TEU7 1601 aa32.55■■■□□ 2.8
PNKP-219ENST00000626274 FAM69CQ0P6D2 419 aa32.55■■■□□ 2.8
PNKP-219ENST00000626274 ARHGAP35Q9NRY4 1499 aa32.54■■■□□ 2.8
PNKP-219ENST00000626274 ATP10BO94823 1461 aa32.44■■■□□ 2.78
PNKP-219ENST00000626274 ARID3CA6NKF2 412 aa32.43■■■□□ 2.78
PNKP-219ENST00000626274 WDR7Q9Y4E6 1490 aa32.42■■■□□ 2.78
PNKP-219ENST00000626274 FMN1Q68DA7 1419 aa32.42■■■□□ 2.78
PNKP-219ENST00000626274 NUP153P49790 1475 aaKnown RBP32.41■■■□□ 2.78
PNKP-219ENST00000626274 GLI2P10070 1586 aa32.41■■■□□ 2.78
PNKP-219ENST00000626274 EPRSP07814 1512 aaKnown RBP32.39■■■□□ 2.78
PNKP-219ENST00000626274 TSPOAP1O95153 1857 aa32.35■■■□□ 2.77
PNKP-219ENST00000626274 CLIP1P30622 1438 aa32.35■■■□□ 2.77
PNKP-219ENST00000626274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.32■■■□□ 2.76
PNKP-219ENST00000626274 HNRNPUL2Q1KMD3 747 aaKnown RBP32.32■■■□□ 2.76
PNKP-219ENST00000626274 KCNH8Q96L42 1107 aa32.28■■■□□ 2.76
PNKP-219ENST00000626274 HECW1Q76N89 1606 aa32.27■■■□□ 2.76
PNKP-219ENST00000626274 LOC105371045A0A1W2PR82 267 aa32.27■■■□□ 2.76
PNKP-219ENST00000626274 MAP3K4Q9Y6R4 1608 aa32.26■■■□□ 2.76
PNKP-219ENST00000626274 ATP1B4Q9UN42 357 aaPredicted RBP32.24■■■□□ 2.75
PNKP-219ENST00000626274 CEP162Q5TB80 1403 aa32.2■■■□□ 2.75
PNKP-219ENST00000626274 PPRC1Q5VV67 1664 aaKnown RBP32.2■■■□□ 2.74
PNKP-219ENST00000626274 CFAP43Q8NDM7 1665 aa32.19■■■□□ 2.74
PNKP-219ENST00000626274 PLEKHD1A6NEE1 506 aa32.19■■■□□ 2.74
PNKP-219ENST00000626274 CDK13Q14004 1512 aaKnown RBP32.19■■■□□ 2.74
PNKP-219ENST00000626274 PCF11O94913 1555 aaKnown RBP32.15■■■□□ 2.74
PNKP-219ENST00000626274 CASKIN1Q8WXD9 1431 aa32.15■■■□□ 2.74
PNKP-219ENST00000626274 CD109Q6YHK3 1445 aa32.12■■■□□ 2.73
PNKP-219ENST00000626274 LRRIQ1Q96JM4 1722 aa32.12■■■□□ 2.73
PNKP-219ENST00000626274 TEX14Q8IWB6 1497 aa32.11■■■□□ 2.73
PNKP-219ENST00000626274 ABCA9Q8IUA7 1624 aa32.11■■■□□ 2.73
PNKP-219ENST00000626274 FYCO1Q9BQS8 1478 aa32.08■■■□□ 2.73
PNKP-219ENST00000626274 MAGI3Q5TCQ9 1506 aa32.07■■■□□ 2.72
PNKP-219ENST00000626274 KDM6BO15054 1643 aa32.07■■■□□ 2.72
PNKP-219ENST00000626274 CDK11AQ9UQ88 783 aaPredicted RBP32.06■■■□□ 2.72
PNKP-219ENST00000626274 CCDC18Q5T9S5 1454 aa32.03■■■□□ 2.72
PNKP-219ENST00000626274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.95■■■□□ 2.71
PNKP-219ENST00000626274 TROQ12816 1431 aaPredicted RBP31.94■■■□□ 2.7
PNKP-219ENST00000626274 TTC37Q6PGP7 1564 aa31.9■■■□□ 2.7
PNKP-219ENST00000626274 COL17A1Q9UMD9 1497 aaPredicted RBP31.88■■■□□ 2.69
PNKP-219ENST00000626274 KIF14Q15058 1648 aa31.88■■■□□ 2.69
PNKP-219ENST00000626274 PHLDB1Q86UU1 1377 aa31.84■■■□□ 2.69
PNKP-219ENST00000626274 NEO1Q92859 1461 aa31.83■■■□□ 2.69
PNKP-219ENST00000626274 VPS8Q8N3P4 1428 aa31.83■■■□□ 2.69
PNKP-219ENST00000626274 MYO5CQ9NQX4 1742 aa31.8■■■□□ 2.68
PNKP-219ENST00000626274 ARAP3Q8WWN8 1544 aa31.8■■■□□ 2.68
PNKP-219ENST00000626274 CFAP74Q9C0B2 1584 aa31.77■■■□□ 2.68
PNKP-219ENST00000626274 PLCH2O75038 1416 aa31.77■■■□□ 2.68
PNKP-219ENST00000626274 FANCAO15360 1455 aa31.77■■■□□ 2.68
PNKP-219ENST00000626274 MTUS2Q5JR59 1369 aa31.7■■■□□ 2.67
PNKP-219ENST00000626274 AKNAQ7Z591 1439 aa31.7■■■□□ 2.67
PNKP-219ENST00000626274 EFCAB2Q5VUJ9 269 aa31.66■■■□□ 2.66
PNKP-219ENST00000626274 EHBP1L1Q8N3D4 1523 aa31.65■■■□□ 2.66
PNKP-219ENST00000626274 TIAM1Q13009 1591 aa31.64■■■□□ 2.66
PNKP-219ENST00000626274 ARHGAP5Q13017 1502 aa31.64■■■□□ 2.66
PNKP-219ENST00000626274 CDC42BPBQ9Y5S2 1711 aa31.63■■■□□ 2.65
PNKP-219ENST00000626274 PREX2Q70Z35 1606 aa31.63■■■□□ 2.65
PNKP-219ENST00000626274 CDC42BPAQ5VT25 1732 aa31.62■■■□□ 2.65
PNKP-219ENST00000626274 RAPGEF3O95398 923 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms