RNA–Protein interactions for RNA: ENST00000626177.2

CCDC163-202, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,229 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-202ENST00000626177 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
CCDC163-202ENST00000626177 HRCP23327 699 aa14.16□□□□□ -0.14
CCDC163-202ENST00000626177 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
CCDC163-202ENST00000626177 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
CCDC163-202ENST00000626177 PBRM1Q86U86 1689 aa14.12□□□□□ -0.15
CCDC163-202ENST00000626177 APLP2Q06481 763 aa14.1□□□□□ -0.15
CCDC163-202ENST00000626177 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
CCDC163-202ENST00000626177 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
CCDC163-202ENST00000626177 CTTNBP2Q8WZ74 1663 aa14.07□□□□□ -0.16
CCDC163-202ENST00000626177 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
CCDC163-202ENST00000626177 FHOD3Q2V2M9 1422 aa14.06□□□□□ -0.16
CCDC163-202ENST00000626177 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
CCDC163-202ENST00000626177 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
CCDC163-202ENST00000626177 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
CCDC163-202ENST00000626177 ATP1B4Q9UN42 357 aaPredicted RBP14□□□□□ -0.17
CCDC163-202ENST00000626177 EFCAB5A4FU69 1503 aa13.97□□□□□ -0.17
CCDC163-202ENST00000626177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
CCDC163-202ENST00000626177 PCF11O94913 1555 aaKnown RBP13.96□□□□□ -0.17
CCDC163-202ENST00000626177 FBLN2P98095 1184 aa13.95□□□□□ -0.18
CCDC163-202ENST00000626177 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
CCDC163-202ENST00000626177 SAMD9Q5K651 1589 aa13.95□□□□□ -0.18
CCDC163-202ENST00000626177 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
CCDC163-202ENST00000626177 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
CCDC163-202ENST00000626177 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
CCDC163-202ENST00000626177 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
CCDC163-202ENST00000626177 MAGI1Q96QZ7 1491 aaPredicted RBP13.91□□□□□ -0.18
CCDC163-202ENST00000626177 CASKIN1Q8WXD9 1431 aa13.9□□□□□ -0.18
CCDC163-202ENST00000626177 SYNJ2O15056 1496 aa13.89□□□□□ -0.19
CCDC163-202ENST00000626177 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
CCDC163-202ENST00000626177 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
CCDC163-202ENST00000626177 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
CCDC163-202ENST00000626177 KIAA0586Q9BVV6 1533 aa13.87□□□□□ -0.19
CCDC163-202ENST00000626177 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
CCDC163-202ENST00000626177 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
CCDC163-202ENST00000626177 CCER1Q8TC90 406 aaPredicted RBP13.85□□□□□ -0.19
CCDC163-202ENST00000626177 LRRIQ1Q96JM4 1722 aa13.85□□□□□ -0.19
CCDC163-202ENST00000626177 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
CCDC163-202ENST00000626177 CFAP43Q8NDM7 1665 aa13.84□□□□□ -0.19
CCDC163-202ENST00000626177 DISP1Q96F81 1524 aa13.84□□□□□ -0.19
CCDC163-202ENST00000626177 ARID3CA6NKF2 412 aa13.83□□□□□ -0.2
CCDC163-202ENST00000626177 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
CCDC163-202ENST00000626177 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
CCDC163-202ENST00000626177 KCNA4P22459 653 aa13.83□□□□□ -0.2
CCDC163-202ENST00000626177 RRBP1Q9P2E9 1410 aaKnown RBP13.82□□□□□ -0.2
CCDC163-202ENST00000626177 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
CCDC163-202ENST00000626177 NUP160Q12769 1436 aa13.81□□□□□ -0.2
CCDC163-202ENST00000626177 ITGAEP38570 1179 aa13.8□□□□□ -0.2
CCDC163-202ENST00000626177 CCNB3Q8WWL7 1395 aa13.79□□□□□ -0.2
CCDC163-202ENST00000626177 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
CCDC163-202ENST00000626177 KIAA0556O60303 1618 aa13.79□□□□□ -0.2
CCDC163-202ENST00000626177 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
CCDC163-202ENST00000626177 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
CCDC163-202ENST00000626177 MAGI3Q5TCQ9 1506 aa13.75□□□□□ -0.21
CCDC163-202ENST00000626177 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
CCDC163-202ENST00000626177 CDK13Q14004 1512 aaKnown RBP13.75□□□□□ -0.21
CCDC163-202ENST00000626177 CHD1O14646 1710 aa13.74□□□□□ -0.21
CCDC163-202ENST00000626177 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
CCDC163-202ENST00000626177 EPRSP07814 1512 aaKnown RBP13.73□□□□□ -0.21
CCDC163-202ENST00000626177 HECW1Q76N89 1606 aa13.71□□□□□ -0.21
CCDC163-202ENST00000626177 PLB1Q6P1J6 1458 aa13.7□□□□□ -0.22
CCDC163-202ENST00000626177 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
CCDC163-202ENST00000626177 NCOA2Q15596 1464 aa13.69□□□□□ -0.22
CCDC163-202ENST00000626177 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
CCDC163-202ENST00000626177 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
CCDC163-202ENST00000626177 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
CCDC163-202ENST00000626177 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
CCDC163-202ENST00000626177 EHBP1L1Q8N3D4 1523 aa13.66□□□□□ -0.22
CCDC163-202ENST00000626177 FGD6Q6ZV73 1430 aa13.65□□□□□ -0.22
CCDC163-202ENST00000626177 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
CCDC163-202ENST00000626177 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
CCDC163-202ENST00000626177 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
CCDC163-202ENST00000626177 MYOM3Q5VTT5 1437 aa13.62□□□□□ -0.23
CCDC163-202ENST00000626177 PTPRKQ15262 1439 aa13.61□□□□□ -0.23
CCDC163-202ENST00000626177 DHX57Q6P158 1386 aaKnown RBP13.6□□□□□ -0.23
CCDC163-202ENST00000626177 RAB3GAP2Q9H2M9 1393 aa13.6□□□□□ -0.23
CCDC163-202ENST00000626177 ABCA8O94911 1581 aa13.59□□□□□ -0.23
CCDC163-202ENST00000626177 PTPRGP23470 1445 aa13.59□□□□□ -0.23
CCDC163-202ENST00000626177 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
CCDC163-202ENST00000626177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC163-202ENST00000626177 SETD5Q9C0A6 1442 aa13.57□□□□□ -0.24
CCDC163-202ENST00000626177 PTPN23Q9H3S7 1636 aa13.56□□□□□ -0.24
CCDC163-202ENST00000626177 ATP10BO94823 1461 aa13.56□□□□□ -0.24
CCDC163-202ENST00000626177 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
CCDC163-202ENST00000626177 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
CCDC163-202ENST00000626177 CDK11AQ9UQ88 783 aaPredicted RBP13.54□□□□□ -0.24
CCDC163-202ENST00000626177 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
CCDC163-202ENST00000626177 KIF14Q15058 1648 aa13.52□□□□□ -0.24
CCDC163-202ENST00000626177 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.24
CCDC163-202ENST00000626177 TCOF1Q13428 1488 aaKnown RBP13.51□□□□□ -0.25
CCDC163-202ENST00000626177 PLEKHD1A6NEE1 506 aa13.49□□□□□ -0.25
CCDC163-202ENST00000626177 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
CCDC163-202ENST00000626177 RRP7BPQ9NSQ0 103 aa13.49□□□□□ -0.25
CCDC163-202ENST00000626177 MIA2Q96PC5 1412 aa13.48□□□□□ -0.25
CCDC163-202ENST00000626177 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
CCDC163-202ENST00000626177 ZNF777Q9ULD5 760 aaPredicted RBP13.46□□□□□ -0.25
CCDC163-202ENST00000626177 NAIPQ13075 1403 aa13.45□□□□□ -0.26
CCDC163-202ENST00000626177 MAPKBP1O60336 1514 aa13.45□□□□□ -0.26
CCDC163-202ENST00000626177 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
CCDC163-202ENST00000626177 CFDP1Q9UEE9 299 aaPredicted RBP13.45□□□□□ -0.26
CCDC163-202ENST00000626177 HFM1A2PYH4 1435 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms