RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 RAPGEF2Q9Y4G8 1499 aa23.48■■□□□ 1.35
SNRPA1-216ENST00000626000 KIAA0586Q9BVV6 1533 aa23.46■■□□□ 1.35
SNRPA1-216ENST00000626000 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
SNRPA1-216ENST00000626000 PRXQ9BXM0 1461 aa23.38■■□□□ 1.33
SNRPA1-216ENST00000626000 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
SNRPA1-216ENST00000626000 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
SNRPA1-216ENST00000626000 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
SNRPA1-216ENST00000626000 IQGAP2Q13576 1575 aa23.34■■□□□ 1.33
SNRPA1-216ENST00000626000 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.33
SNRPA1-216ENST00000626000 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
SNRPA1-216ENST00000626000 CARMIL2Q6F5E8 1435 aa23.27■■□□□ 1.32
SNRPA1-216ENST00000626000 ERCC6L2Q5T890 1561 aa23.25■■□□□ 1.31
SNRPA1-216ENST00000626000 UGGT2Q9NYU1 1516 aa23.21■■□□□ 1.31
SNRPA1-216ENST00000626000 KIF21BO75037 1637 aa23.2■■□□□ 1.3
SNRPA1-216ENST00000626000 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
SNRPA1-216ENST00000626000 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
SNRPA1-216ENST00000626000 FAM9AQ8IZU1 332 aaPredicted RBP23.12■■□□□ 1.29
SNRPA1-216ENST00000626000 PTPRGP23470 1445 aa23.09■■□□□ 1.29
SNRPA1-216ENST00000626000 DISP1Q96F81 1524 aa23.09■■□□□ 1.29
SNRPA1-216ENST00000626000 KIAA0556O60303 1618 aa23.08■■□□□ 1.29
SNRPA1-216ENST00000626000 NPM1P06748 294 aaKnown RBP eCLIP23■■□□□ 1.27
SNRPA1-216ENST00000626000 UHRF1BP1LA0JNW5 1464 aa22.97■■□□□ 1.27
SNRPA1-216ENST00000626000 ADCY10Q96PN6 1610 aa22.97■■□□□ 1.27
SNRPA1-216ENST00000626000 SAMD9Q5K651 1589 aa22.95■■□□□ 1.26
SNRPA1-216ENST00000626000 UACAQ9BZF9 1416 aa22.95■■□□□ 1.26
SNRPA1-216ENST00000626000 EFCAB5A4FU69 1503 aa22.94■■□□□ 1.26
SNRPA1-216ENST00000626000 UBTFP17480 764 aaKnown RBP22.92■■□□□ 1.26
SNRPA1-216ENST00000626000 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
SNRPA1-216ENST00000626000 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
SNRPA1-216ENST00000626000 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
SNRPA1-216ENST00000626000 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
SNRPA1-216ENST00000626000 ABCA8O94911 1581 aa22.83■■□□□ 1.25
SNRPA1-216ENST00000626000 KDM5BQ9UGL1 1544 aa22.82■■□□□ 1.24
SNRPA1-216ENST00000626000 PLB1Q6P1J6 1458 aa22.79■■□□□ 1.24
SNRPA1-216ENST00000626000 ABCC10Q5T3U5 1492 aa22.76■■□□□ 1.23
SNRPA1-216ENST00000626000 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
SNRPA1-216ENST00000626000 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
SNRPA1-216ENST00000626000 RAPGEF6Q8TEU7 1601 aa22.73■■□□□ 1.23
SNRPA1-216ENST00000626000 FHOD3Q2V2M9 1422 aa22.73■■□□□ 1.23
SNRPA1-216ENST00000626000 RANGAP1P46060 587 aaPredicted RBP22.72■■□□□ 1.23
SNRPA1-216ENST00000626000 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
SNRPA1-216ENST00000626000 FMN1Q68DA7 1419 aa22.72■■□□□ 1.23
SNRPA1-216ENST00000626000 ASXL2Q76L83 1435 aa22.71■■□□□ 1.23
SNRPA1-216ENST00000626000 DIP2BQ9P265 1576 aa22.71■■□□□ 1.23
SNRPA1-216ENST00000626000 KIF13AQ9H1H9 1805 aa22.71■■□□□ 1.23
SNRPA1-216ENST00000626000 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
SNRPA1-216ENST00000626000 GLI2P10070 1586 aa22.65■■□□□ 1.22
SNRPA1-216ENST00000626000 FAM69CQ0P6D2 419 aa22.65■■□□□ 1.22
SNRPA1-216ENST00000626000 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
SNRPA1-216ENST00000626000 NUP153P49790 1475 aaKnown RBP22.6■■□□□ 1.21
SNRPA1-216ENST00000626000 CLIP1P30622 1438 aa22.6■■□□□ 1.21
SNRPA1-216ENST00000626000 ATP10BO94823 1461 aa22.6■■□□□ 1.21
SNRPA1-216ENST00000626000 EPRSP07814 1512 aaKnown RBP22.59■■□□□ 1.21
SNRPA1-216ENST00000626000 HECW1Q76N89 1606 aa22.59■■□□□ 1.21
SNRPA1-216ENST00000626000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
SNRPA1-216ENST00000626000 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
SNRPA1-216ENST00000626000 MAP3K4Q9Y6R4 1608 aa22.5■■□□□ 1.19
SNRPA1-216ENST00000626000 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
SNRPA1-216ENST00000626000 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
SNRPA1-216ENST00000626000 TEX14Q8IWB6 1497 aa22.49■■□□□ 1.19
SNRPA1-216ENST00000626000 CASKIN1Q8WXD9 1431 aa22.48■■□□□ 1.19
SNRPA1-216ENST00000626000 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
SNRPA1-216ENST00000626000 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
SNRPA1-216ENST00000626000 CCDC18Q5T9S5 1454 aa22.47■■□□□ 1.19
SNRPA1-216ENST00000626000 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
SNRPA1-216ENST00000626000 ARID3CA6NKF2 412 aa22.45■■□□□ 1.18
SNRPA1-216ENST00000626000 TSPOAP1O95153 1857 aa22.45■■□□□ 1.18
SNRPA1-216ENST00000626000 ABCA9Q8IUA7 1624 aa22.42■■□□□ 1.18
SNRPA1-216ENST00000626000 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
SNRPA1-216ENST00000626000 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
SNRPA1-216ENST00000626000 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
SNRPA1-216ENST00000626000 MAGI3Q5TCQ9 1506 aa22.41■■□□□ 1.18
SNRPA1-216ENST00000626000 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
SNRPA1-216ENST00000626000 CDK13Q14004 1512 aaKnown RBP22.4■■□□□ 1.18
SNRPA1-216ENST00000626000 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
SNRPA1-216ENST00000626000 KDM6BO15054 1643 aa22.37■■□□□ 1.17
SNRPA1-216ENST00000626000 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
SNRPA1-216ENST00000626000 PHLDB1Q86UU1 1377 aa22.35■■□□□ 1.17
SNRPA1-216ENST00000626000 TROQ12816 1431 aaPredicted RBP22.32■■□□□ 1.16
SNRPA1-216ENST00000626000 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
SNRPA1-216ENST00000626000 KIF14Q15058 1648 aa22.31■■□□□ 1.16
SNRPA1-216ENST00000626000 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
SNRPA1-216ENST00000626000 NEO1Q92859 1461 aa22.28■■□□□ 1.16
SNRPA1-216ENST00000626000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.27■■□□□ 1.16
SNRPA1-216ENST00000626000 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
SNRPA1-216ENST00000626000 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
SNRPA1-216ENST00000626000 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
SNRPA1-216ENST00000626000 MYO5CQ9NQX4 1742 aa22.21■■□□□ 1.15
SNRPA1-216ENST00000626000 FANCAO15360 1455 aa22.18■■□□□ 1.14
SNRPA1-216ENST00000626000 PLCH2O75038 1416 aa22.18■■□□□ 1.14
SNRPA1-216ENST00000626000 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
SNRPA1-216ENST00000626000 EHBP1L1Q8N3D4 1523 aa22.16■■□□□ 1.14
SNRPA1-216ENST00000626000 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
SNRPA1-216ENST00000626000 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
SNRPA1-216ENST00000626000 COL17A1Q9UMD9 1497 aaPredicted RBP22.11■■□□□ 1.13
SNRPA1-216ENST00000626000 AKNAQ7Z591 1439 aa22.11■■□□□ 1.13
SNRPA1-216ENST00000626000 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
SNRPA1-216ENST00000626000 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
SNRPA1-216ENST00000626000 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
SNRPA1-216ENST00000626000 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms