RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 CLASP1Q7Z460 1538 aa15.79■□□□□ 0.12
CHD2-206ENST00000625990 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
CHD2-206ENST00000625990 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
CHD2-206ENST00000625990 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
CHD2-206ENST00000625990 BIVM-ERCC5R4GMW8 1640 aa15.78■□□□□ 0.12
CHD2-206ENST00000625990 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
CHD2-206ENST00000625990 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
CHD2-206ENST00000625990 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
CHD2-206ENST00000625990 ERCC6L2Q5T890 1561 aa15.7■□□□□ 0.1
CHD2-206ENST00000625990 GRIN2AQ12879 1464 aa15.67■□□□□ 0.1
CHD2-206ENST00000625990 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
CHD2-206ENST00000625990 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
CHD2-206ENST00000625990 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
CHD2-206ENST00000625990 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
CHD2-206ENST00000625990 NUP160Q12769 1436 aa15.6■□□□□ 0.09
CHD2-206ENST00000625990 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.08
CHD2-206ENST00000625990 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
CHD2-206ENST00000625990 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
CHD2-206ENST00000625990 PRG4Q92954 1404 aaPredicted RBP15.48■□□□□ 0.07
CHD2-206ENST00000625990 IGF1RP08069 1367 aa15.48■□□□□ 0.07
CHD2-206ENST00000625990 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
CHD2-206ENST00000625990 JPH4Q96JJ6 628 aa15.44■□□□□ 0.06
CHD2-206ENST00000625990 TTBK1Q5TCY1 1321 aaPredicted RBP15.41■□□□□ 0.06
CHD2-206ENST00000625990 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
CHD2-206ENST00000625990 CUL7Q14999 1698 aa15.37■□□□□ 0.05
CHD2-206ENST00000625990 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
CHD2-206ENST00000625990 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
CHD2-206ENST00000625990 ADCY10Q96PN6 1610 aa15.32■□□□□ 0.04
CHD2-206ENST00000625990 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.03
CHD2-206ENST00000625990 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
CHD2-206ENST00000625990 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
CHD2-206ENST00000625990 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
CHD2-206ENST00000625990 RAPGEF2Q9Y4G8 1499 aa15.21■□□□□ 0.03
CHD2-206ENST00000625990 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.03
CHD2-206ENST00000625990 DISP1Q96F81 1524 aa15.21■□□□□ 0.03
CHD2-206ENST00000625990 PTPRGP23470 1445 aa15.2■□□□□ 0.02
CHD2-206ENST00000625990 DIP2BQ9P265 1576 aa15.18■□□□□ 0.02
CHD2-206ENST00000625990 ABCC10Q5T3U5 1492 aa15.17■□□□□ 0.02
CHD2-206ENST00000625990 TNIKQ9UKE5 1360 aa15.16■□□□□ 0.02
CHD2-206ENST00000625990 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHD2-206ENST00000625990 MAPKBP1O60336 1514 aa15.16■□□□□ 0.02
CHD2-206ENST00000625990 ZBTB22O15209 634 aa15.14■□□□□ 0.01
CHD2-206ENST00000625990 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
CHD2-206ENST00000625990 CARMIL2Q6F5E8 1435 aa15.14■□□□□ 0.01
CHD2-206ENST00000625990 KIAA0556O60303 1618 aa15.14■□□□□ 0.01
CHD2-206ENST00000625990 UGGT2Q9NYU1 1516 aa15.12■□□□□ 0.01
CHD2-206ENST00000625990 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
CHD2-206ENST00000625990 ABCC2Q92887 1545 aa15.12■□□□□ 0.01
CHD2-206ENST00000625990 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
CHD2-206ENST00000625990 CTTNBP2Q8WZ74 1663 aa15.1■□□□□ 0.01
CHD2-206ENST00000625990 PRXQ9BXM0 1461 aa15.1■□□□□ 0.01
CHD2-206ENST00000625990 SLC4A2P04920 1241 aa15.1■□□□□ 0.01
CHD2-206ENST00000625990 ASXL2Q76L83 1435 aa15.09■□□□□ 0.01
CHD2-206ENST00000625990 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
CHD2-206ENST00000625990 ARID3CA6NKF2 412 aa15.08■□□□□ 0
CHD2-206ENST00000625990 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
CHD2-206ENST00000625990 P3H3Q8IVL6 736 aa15.08■□□□□ 0
CHD2-206ENST00000625990 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
CHD2-206ENST00000625990 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
CHD2-206ENST00000625990 ZCCHC11Q5TAX3 1644 aaKnown RBP15.05■□□□□ -0
CHD2-206ENST00000625990 UHRF1BP1LA0JNW5 1464 aa15.04■□□□□ -0
CHD2-206ENST00000625990 PPRC1Q5VV67 1664 aaKnown RBP15.02□□□□□ -0.01
CHD2-206ENST00000625990 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
CHD2-206ENST00000625990 KDM6BO15054 1643 aa15□□□□□ -0.01
CHD2-206ENST00000625990 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
CHD2-206ENST00000625990 ABCA8O94911 1581 aa14.98□□□□□ -0.01
CHD2-206ENST00000625990 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
CHD2-206ENST00000625990 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
CHD2-206ENST00000625990 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
CHD2-206ENST00000625990 GLI2P10070 1586 aa14.94□□□□□ -0.02
CHD2-206ENST00000625990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.022e-6■□□□□ 10
CHD2-206ENST00000625990 WDR7Q9Y4E6 1490 aa14.93□□□□□ -0.02
CHD2-206ENST00000625990 MAP3K4Q9Y6R4 1608 aa14.92□□□□□ -0.02
CHD2-206ENST00000625990 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
CHD2-206ENST00000625990 SAMD9Q5K651 1589 aa14.9□□□□□ -0.02
CHD2-206ENST00000625990 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
CHD2-206ENST00000625990 ATP10BO94823 1461 aa14.87□□□□□ -0.03
CHD2-206ENST00000625990 EEA1Q15075 1411 aa14.83□□□□□ -0.03
CHD2-206ENST00000625990 RAPGEF6Q8TEU7 1601 aa14.83□□□□□ -0.04
CHD2-206ENST00000625990 CD109Q6YHK3 1445 aa14.83□□□□□ -0.04
CHD2-206ENST00000625990 KIF21BO75037 1637 aa14.82□□□□□ -0.04
CHD2-206ENST00000625990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
CHD2-206ENST00000625990 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
CHD2-206ENST00000625990 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
CHD2-206ENST00000625990 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
CHD2-206ENST00000625990 TEX14Q8IWB6 1497 aa14.78□□□□□ -0.04
CHD2-206ENST00000625990 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
CHD2-206ENST00000625990 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
CHD2-206ENST00000625990 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
CHD2-206ENST00000625990 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
CHD2-206ENST00000625990 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
CHD2-206ENST00000625990 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
CHD2-206ENST00000625990 ATP1B4Q9UN42 357 aaPredicted RBP14.72□□□□□ -0.05
CHD2-206ENST00000625990 ARHGAP35Q9NRY4 1499 aa14.71□□□□□ -0.05
CHD2-206ENST00000625990 ABCA9Q8IUA7 1624 aa14.71□□□□□ -0.05
CHD2-206ENST00000625990 RAPGEF3O95398 923 aa14.71□□□□□ -0.05
CHD2-206ENST00000625990 EFCAB5A4FU69 1503 aa14.7□□□□□ -0.06
CHD2-206ENST00000625990 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
CHD2-206ENST00000625990 FRMPD1Q5SYB0 1578 aa14.66□□□□□ -0.06
CHD2-206ENST00000625990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms