RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 NUP160Q12769 1436 aa27.1■■□□□ 1.93
CCNA1-203ENST00000625767 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
CCNA1-203ENST00000625767 IQGAP2Q13576 1575 aa26.98■■□□□ 1.91
CCNA1-203ENST00000625767 KIAA0586Q9BVV6 1533 aa26.98■■□□□ 1.91
CCNA1-203ENST00000625767 OSCARQ8IYS5 282 aa26.97■■□□□ 1.91
CCNA1-203ENST00000625767 TNIKQ9UKE5 1360 aa26.96■■□□□ 1.91
CCNA1-203ENST00000625767 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.91
CCNA1-203ENST00000625767 SHROOM2Q13796 1616 aa26.86■■□□□ 1.89
CCNA1-203ENST00000625767 JPH4Q96JJ6 628 aa26.83■■□□□ 1.89
CCNA1-203ENST00000625767 UGGT2Q9NYU1 1516 aa26.82■■□□□ 1.88
CCNA1-203ENST00000625767 CEP162Q5TB80 1403 aa26.81■■□□□ 1.88
CCNA1-203ENST00000625767 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
CCNA1-203ENST00000625767 DISP1Q96F81 1524 aa26.77■■□□□ 1.88
CCNA1-203ENST00000625767 SAMD9Q5K651 1589 aa26.76■■□□□ 1.87
CCNA1-203ENST00000625767 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
CCNA1-203ENST00000625767 CLIP1P30622 1438 aa26.75■■□□□ 1.87
CCNA1-203ENST00000625767 PRG4Q92954 1404 aaPredicted RBP26.75■■□□□ 1.87
CCNA1-203ENST00000625767 P3H3Q8IVL6 736 aa26.75■■□□□ 1.87
CCNA1-203ENST00000625767 KIAA0556O60303 1618 aa26.73■■□□□ 1.87
CCNA1-203ENST00000625767 EFCAB5A4FU69 1503 aa26.68■■□□□ 1.86
CCNA1-203ENST00000625767 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
CCNA1-203ENST00000625767 ARAP1Q96P48 1450 aa26.65■■□□□ 1.86
CCNA1-203ENST00000625767 ARHGEF11O15085 1522 aa26.63■■□□□ 1.85
CCNA1-203ENST00000625767 TTBK1Q5TCY1 1321 aaPredicted RBP26.63■■□□□ 1.85
CCNA1-203ENST00000625767 CARMIL2Q6F5E8 1435 aa26.62■■□□□ 1.85
CCNA1-203ENST00000625767 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
CCNA1-203ENST00000625767 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
CCNA1-203ENST00000625767 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
CCNA1-203ENST00000625767 PTPRGP23470 1445 aa26.48■■□□□ 1.83
CCNA1-203ENST00000625767 PLB1Q6P1J6 1458 aa26.44■■□□□ 1.82
CCNA1-203ENST00000625767 PCF11O94913 1555 aaKnown RBP26.43■■□□□ 1.82
CCNA1-203ENST00000625767 DNAJC5Q9H3Z4 198 aa26.42■■□□□ 1.82
CCNA1-203ENST00000625767 FMN1Q68DA7 1419 aa26.41■■□□□ 1.82
CCNA1-203ENST00000625767 VPS8Q8N3P4 1428 aa26.41■■□□□ 1.82
CCNA1-203ENST00000625767 ABCA8O94911 1581 aa26.39■■□□□ 1.81
CCNA1-203ENST00000625767 RAPGEF6Q8TEU7 1601 aa26.38■■□□□ 1.81
CCNA1-203ENST00000625767 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
CCNA1-203ENST00000625767 CYB5RLQ6IPT4 315 aa26.35■■□□□ 1.81
CCNA1-203ENST00000625767 ADCY10Q96PN6 1610 aa26.33■■□□□ 1.8
CCNA1-203ENST00000625767 UACAQ9BZF9 1416 aa26.32■■□□□ 1.8
CCNA1-203ENST00000625767 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
CCNA1-203ENST00000625767 ARID3CA6NKF2 412 aa26.31■■□□□ 1.8
CCNA1-203ENST00000625767 CASKIN1Q8WXD9 1431 aa26.31■■□□□ 1.8
CCNA1-203ENST00000625767 NUP153P49790 1475 aaKnown RBP26.29■■□□□ 1.8
CCNA1-203ENST00000625767 FYCO1Q9BQS8 1478 aa26.29■■□□□ 1.8
CCNA1-203ENST00000625767 ABCC2Q92887 1545 aa26.29■■□□□ 1.8
CCNA1-203ENST00000625767 HECW1Q76N89 1606 aa26.28■■□□□ 1.8
CCNA1-203ENST00000625767 CDK13Q14004 1512 aaKnown RBP26.25■■□□□ 1.79
CCNA1-203ENST00000625767 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
CCNA1-203ENST00000625767 EPRSP07814 1512 aaKnown RBP26.2■■□□□ 1.78
CCNA1-203ENST00000625767 ZCCHC11Q5TAX3 1644 aaKnown RBP26.18■■□□□ 1.78
CCNA1-203ENST00000625767 ATP10BO94823 1461 aa26.17■■□□□ 1.78
CCNA1-203ENST00000625767 CFAP43Q8NDM7 1665 aa26.15■■□□□ 1.78
CCNA1-203ENST00000625767 KDM5BQ9UGL1 1544 aa26.14■■□□□ 1.78
CCNA1-203ENST00000625767 TIAM1Q13009 1591 aa26.13■■□□□ 1.77
CCNA1-203ENST00000625767 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
CCNA1-203ENST00000625767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.1■■□□□ 1.77
CCNA1-203ENST00000625767 HNRNPUL2Q1KMD3 747 aaKnown RBP26.1■■□□□ 1.77
CCNA1-203ENST00000625767 MAGI3Q5TCQ9 1506 aa26.09■■□□□ 1.77
CCNA1-203ENST00000625767 PPARGC1BQ86YN6 1023 aaKnown RBP26.08■■□□□ 1.77
CCNA1-203ENST00000625767 KANK4Q5T7N3 995 aaPredicted RBP26.06■■□□□ 1.76
CCNA1-203ENST00000625767 MAP3K1Q13233 1512 aa26.02■■□□□ 1.76
CCNA1-203ENST00000625767 APLP2Q06481 763 aa26.02■■□□□ 1.76
CCNA1-203ENST00000625767 NPM1P06748 294 aaKnown RBP eCLIP26■■□□□ 1.75
CCNA1-203ENST00000625767 LRRC9Q6ZRR7 1453 aa25.99■■□□□ 1.75
CCNA1-203ENST00000625767 ASXL2Q76L83 1435 aa25.97■■□□□ 1.75
CCNA1-203ENST00000625767 MTUS2Q5JR59 1369 aa25.94■■□□□ 1.74
CCNA1-203ENST00000625767 KIF14Q15058 1648 aa25.94■■□□□ 1.74
CCNA1-203ENST00000625767 MAPKBP1O60336 1514 aa25.93■■□□□ 1.74
CCNA1-203ENST00000625767 EHBP1L1Q8N3D4 1523 aa25.93■■□□□ 1.74
CCNA1-203ENST00000625767 PLEKHD1A6NEE1 506 aa25.93■■□□□ 1.74
CCNA1-203ENST00000625767 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
CCNA1-203ENST00000625767 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
CCNA1-203ENST00000625767 CDK11AQ9UQ88 783 aaPredicted RBP25.9■■□□□ 1.74
CCNA1-203ENST00000625767 KCNH8Q96L42 1107 aa25.88■■□□□ 1.73
CCNA1-203ENST00000625767 SUPT6HQ7KZ85 1726 aaKnown RBP25.85■■□□□ 1.73
CCNA1-203ENST00000625767 TTC37Q6PGP7 1564 aa25.81■■□□□ 1.72
CCNA1-203ENST00000625767 NCOA2Q15596 1464 aa25.81■■□□□ 1.72
CCNA1-203ENST00000625767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.8■■□□□ 1.72
CCNA1-203ENST00000625767 DIP2BQ9P265 1576 aa25.78■■□□□ 1.72
CCNA1-203ENST00000625767 ABCC10Q5T3U5 1492 aa25.77■■□□□ 1.72
CCNA1-203ENST00000625767 KIF13AQ9H1H9 1805 aa25.77■■□□□ 1.72
CCNA1-203ENST00000625767 PHLDB1Q86UU1 1377 aa25.75■■□□□ 1.71
CCNA1-203ENST00000625767 ABCA9Q8IUA7 1624 aa25.74■■□□□ 1.71
CCNA1-203ENST00000625767 CDC42BPAQ5VT25 1732 aa25.74■■□□□ 1.71
CCNA1-203ENST00000625767 MYO5CQ9NQX4 1742 aa25.69■■□□□ 1.7
CCNA1-203ENST00000625767 FAM69CQ0P6D2 419 aa25.68■■□□□ 1.7
CCNA1-203ENST00000625767 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
CCNA1-203ENST00000625767 GLI2P10070 1586 aa25.68■■□□□ 1.7
CCNA1-203ENST00000625767 GPATCH8Q9UKJ3 1502 aaKnown RBP25.67■■□□□ 1.7
CCNA1-203ENST00000625767 MAP3K4Q9Y6R4 1608 aa25.67■■□□□ 1.7
CCNA1-203ENST00000625767 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
CCNA1-203ENST00000625767 PREX2Q70Z35 1606 aa25.66■■□□□ 1.7
CCNA1-203ENST00000625767 CCNB3Q8WWL7 1395 aa25.66■■□□□ 1.7
CCNA1-203ENST00000625767 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.69
CCNA1-203ENST00000625767 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
CCNA1-203ENST00000625767 CD109Q6YHK3 1445 aa25.61■■□□□ 1.69
CCNA1-203ENST00000625767 PPRC1Q5VV67 1664 aaKnown RBP25.59■■□□□ 1.69
CCNA1-203ENST00000625767 PLCH2O75038 1416 aa25.58■■□□□ 1.69
CCNA1-203ENST00000625767 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms