RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 IGF1RP08069 1367 aa25.38■■□□□ 1.65
TUBB3-215ENST00000625617 CUL7Q14999 1698 aa25.36■■□□□ 1.65
TUBB3-215ENST00000625617 KIAA0586Q9BVV6 1533 aa25.36■■□□□ 1.65
TUBB3-215ENST00000625617 AEBP2Q6ZN18 517 aaPredicted RBP25.31■■□□□ 1.64
TUBB3-215ENST00000625617 NPM1P06748 294 aaKnown RBP eCLIP25.27■■□□□ 1.64
TUBB3-215ENST00000625617 MAPKBP1O60336 1514 aa25.26■■□□□ 1.63
TUBB3-215ENST00000625617 KIF13AQ9H1H9 1805 aa25.26■■□□□ 1.63
TUBB3-215ENST00000625617 ABCC10Q5T3U5 1492 aa25.25■■□□□ 1.63
TUBB3-215ENST00000625617 ADCY10Q96PN6 1610 aa25.25■■□□□ 1.63
TUBB3-215ENST00000625617 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
TUBB3-215ENST00000625617 FAM69CQ0P6D2 419 aa25.21■■□□□ 1.63
TUBB3-215ENST00000625617 DIP2BQ9P265 1576 aa25.18■■□□□ 1.62
TUBB3-215ENST00000625617 PTPRGP23470 1445 aa25.14■■□□□ 1.62
TUBB3-215ENST00000625617 CARMIL2Q6F5E8 1435 aa25.12■■□□□ 1.61
TUBB3-215ENST00000625617 IQGAP2Q13576 1575 aa25.11■■□□□ 1.61
TUBB3-215ENST00000625617 TNIKQ9UKE5 1360 aa25.1■■□□□ 1.61
TUBB3-215ENST00000625617 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
TUBB3-215ENST00000625617 ABCC2Q92887 1545 aa25.03■■□□□ 1.6
TUBB3-215ENST00000625617 RAPGEF2Q9Y4G8 1499 aa25.01■■□□□ 1.59
TUBB3-215ENST00000625617 KDM6BO15054 1643 aa24.98■■□□□ 1.59
TUBB3-215ENST00000625617 DISP1Q96F81 1524 aa24.98■■□□□ 1.59
TUBB3-215ENST00000625617 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
TUBB3-215ENST00000625617 UGGT2Q9NYU1 1516 aa24.95■■□□□ 1.58
TUBB3-215ENST00000625617 PLB1Q6P1J6 1458 aa24.95■■□□□ 1.58
TUBB3-215ENST00000625617 ASXL2Q76L83 1435 aa24.95■■□□□ 1.58
TUBB3-215ENST00000625617 UACAQ9BZF9 1416 aa24.95■■□□□ 1.58
TUBB3-215ENST00000625617 TSPOAP1O95153 1857 aa24.89■■□□□ 1.57
TUBB3-215ENST00000625617 KIAA0556O60303 1618 aa24.88■■□□□ 1.57
TUBB3-215ENST00000625617 GLI2P10070 1586 aa24.87■■□□□ 1.57
TUBB3-215ENST00000625617 KDM5BQ9UGL1 1544 aa24.85■■□□□ 1.57
TUBB3-215ENST00000625617 EPRSP07814 1512 aaKnown RBP24.79■■□□□ 1.56
TUBB3-215ENST00000625617 ZCCHC11Q5TAX3 1644 aaKnown RBP24.77■■□□□ 1.56
TUBB3-215ENST00000625617 PPRC1Q5VV67 1664 aaKnown RBP24.77■■□□□ 1.56
TUBB3-215ENST00000625617 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
TUBB3-215ENST00000625617 CTTNBP2Q8WZ74 1663 aa24.75■■□□□ 1.55
TUBB3-215ENST00000625617 PRXQ9BXM0 1461 aa24.73■■□□□ 1.55
TUBB3-215ENST00000625617 KDM4FA0A1W2PPD8 638 aa24.72■■□□□ 1.55
TUBB3-215ENST00000625617 MAP3K4Q9Y6R4 1608 aa24.72■■□□□ 1.55
TUBB3-215ENST00000625617 TEX14Q8IWB6 1497 aa24.71■■□□□ 1.55
TUBB3-215ENST00000625617 WDR7Q9Y4E6 1490 aa24.71■■□□□ 1.55
TUBB3-215ENST00000625617 ABCA8O94911 1581 aa24.65■■□□□ 1.54
TUBB3-215ENST00000625617 COL17A1Q9UMD9 1497 aaPredicted RBP24.64■■□□□ 1.54
TUBB3-215ENST00000625617 ADGRL1O94910 1474 aa24.57■■□□□ 1.52
TUBB3-215ENST00000625617 CD109Q6YHK3 1445 aa24.54■■□□□ 1.52
TUBB3-215ENST00000625617 MAGI3Q5TCQ9 1506 aa24.53■■□□□ 1.52
TUBB3-215ENST00000625617 CFAP43Q8NDM7 1665 aa24.51■■□□□ 1.51
TUBB3-215ENST00000625617 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
TUBB3-215ENST00000625617 KCNH8Q96L42 1107 aa24.51■■□□□ 1.51
TUBB3-215ENST00000625617 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
TUBB3-215ENST00000625617 P3H3Q8IVL6 736 aa24.47■■□□□ 1.51
TUBB3-215ENST00000625617 ARID3CA6NKF2 412 aa24.45■■□□□ 1.5
TUBB3-215ENST00000625617 SAMD9Q5K651 1589 aa24.44■■□□□ 1.5
TUBB3-215ENST00000625617 ATP10BO94823 1461 aa24.43■■□□□ 1.5
TUBB3-215ENST00000625617 EEA1Q15075 1411 aa24.43■■□□□ 1.5
TUBB3-215ENST00000625617 RAPGEF6Q8TEU7 1601 aa24.36■■□□□ 1.49
TUBB3-215ENST00000625617 ARAP3Q8WWN8 1544 aa24.33■■□□□ 1.49
TUBB3-215ENST00000625617 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
TUBB3-215ENST00000625617 FHOD3Q2V2M9 1422 aa24.3■■□□□ 1.48
TUBB3-215ENST00000625617 NUP153P49790 1475 aaKnown RBP24.3■■□□□ 1.48
TUBB3-215ENST00000625617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.29■■□□□ 1.48
TUBB3-215ENST00000625617 HNRNPUL2Q1KMD3 747 aaKnown RBP24.29■■□□□ 1.48
TUBB3-215ENST00000625617 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
TUBB3-215ENST00000625617 RANGAP1P46060 587 aaPredicted RBP24.28■■□□□ 1.48
TUBB3-215ENST00000625617 HECW2Q9P2P5 1572 aa24.25■■□□□ 1.47
TUBB3-215ENST00000625617 KIF21BO75037 1637 aa24.24■■□□□ 1.47
TUBB3-215ENST00000625617 NEO1Q92859 1461 aa24.24■■□□□ 1.47
TUBB3-215ENST00000625617 EFCAB5A4FU69 1503 aa24.21■■□□□ 1.47
TUBB3-215ENST00000625617 RAPGEF3O95398 923 aa24.17■■□□□ 1.46
TUBB3-215ENST00000625617 PLEKHD1A6NEE1 506 aa24.14■■□□□ 1.45
TUBB3-215ENST00000625617 FRMPD1Q5SYB0 1578 aa24.14■■□□□ 1.45
TUBB3-215ENST00000625617 FANCAO15360 1455 aa24.07■■□□□ 1.44
TUBB3-215ENST00000625617 DENND4BO75064 1496 aaPredicted RBP24.07■■□□□ 1.44
TUBB3-215ENST00000625617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.07■■□□□ 1.44
TUBB3-215ENST00000625617 ARHGEF40Q8TER5 1519 aa24.06■■□□□ 1.44
TUBB3-215ENST00000625617 ILDR1Q86SU0 546 aaPredicted RBP24.06■■□□□ 1.44
TUBB3-215ENST00000625617 CFAP74Q9C0B2 1584 aa24.06■■□□□ 1.44
TUBB3-215ENST00000625617 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
TUBB3-215ENST00000625617 AKNAQ7Z591 1439 aa24.05■■□□□ 1.44
TUBB3-215ENST00000625617 PTPRMP28827 1452 aa24.05■■□□□ 1.44
TUBB3-215ENST00000625617 ADAMTSL3P82987 1691 aa24.05■■□□□ 1.44
TUBB3-215ENST00000625617 TTC37Q6PGP7 1564 aa24.04■■□□□ 1.44
TUBB3-215ENST00000625617 ARID4BQ4LE39 1312 aaPredicted RBP24.03■■□□□ 1.44
TUBB3-215ENST00000625617 UBTFP17480 764 aaKnown RBP24.02■■□□□ 1.44
TUBB3-215ENST00000625617 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
TUBB3-215ENST00000625617 FMN1Q68DA7 1419 aa24■■□□□ 1.43
TUBB3-215ENST00000625617 BCORL1Q5H9F3 1711 aa23.98■■□□□ 1.43
TUBB3-215ENST00000625617 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
TUBB3-215ENST00000625617 HECW1Q76N89 1606 aa23.98■■□□□ 1.43
TUBB3-215ENST00000625617 ZMYM4Q5VZL5 1548 aa23.97■■□□□ 1.43
TUBB3-215ENST00000625617 ARHGAP35Q9NRY4 1499 aa23.97■■□□□ 1.43
TUBB3-215ENST00000625617 MADDQ8WXG6 1647 aa23.96■■□□□ 1.43
TUBB3-215ENST00000625617 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
TUBB3-215ENST00000625617 ATP1B4Q9UN42 357 aaPredicted RBP23.93■■□□□ 1.42
TUBB3-215ENST00000625617 ZFYVE16Q7Z3T8 1539 aa23.93■■□□□ 1.42
TUBB3-215ENST00000625617 PLCH2O75038 1416 aa23.93■■□□□ 1.42
TUBB3-215ENST00000625617 POGZQ7Z3K3 1410 aa23.91■■□□□ 1.42
TUBB3-215ENST00000625617 YEATS2Q9ULM3 1422 aa23.91■■□□□ 1.42
TUBB3-215ENST00000625617 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
TUBB3-215ENST00000625617 SCAPERQ9BY12 1400 aa23.88■■□□□ 1.41
TUBB3-215ENST00000625617 CDK11AQ9UQ88 783 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms