RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
PMS1-221ENST00000624204 ANO8Q9HCE9 1232 aaPredicted RBP21.14■□□□□ 0.97
PMS1-221ENST00000624204 MYT1LQ9UL68 1186 aa21.14■□□□□ 0.97
PMS1-221ENST00000624204 RRBP1Q9P2E9 1410 aaKnown RBP21.13■□□□□ 0.97
PMS1-221ENST00000624204 CCDC136Q96JN2 1154 aa21.13■□□□□ 0.97
PMS1-221ENST00000624204 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
PMS1-221ENST00000624204 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
PMS1-221ENST00000624204 MAPKBP1O60336 1514 aa21.06■□□□□ 0.96
PMS1-221ENST00000624204 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
PMS1-221ENST00000624204 B4GALNT3Q6L9W6 998 aa21.06■□□□□ 0.96
PMS1-221ENST00000624204 CUX2O14529 1486 aa21.03■□□□□ 0.96
PMS1-221ENST00000624204 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
PMS1-221ENST00000624204 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
PMS1-221ENST00000624204 PPP4R2Q9NY27 417 aa20.98■□□□□ 0.95
PMS1-221ENST00000624204 NOP58Q9Y2X3 529 aaKnown RBP20.98■□□□□ 0.95
PMS1-221ENST00000624204 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
PMS1-221ENST00000624204 PAK3O75914 559 aaPredicted RBP20.94■□□□□ 0.94
PMS1-221ENST00000624204 FAM9BQ8IZU0 186 aa20.94■□□□□ 0.94
PMS1-221ENST00000624204 NPM2Q86SE8 214 aaKnown RBP20.92■□□□□ 0.94
PMS1-221ENST00000624204 SALL2Q9Y467 1007 aaPredicted RBP20.91■□□□□ 0.94
PMS1-221ENST00000624204 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
PMS1-221ENST00000624204 RTL5Q5HYW3 569 aaPredicted RBP20.91■□□□□ 0.94
PMS1-221ENST00000624204 POLR3GLQ9BT43 218 aa20.87■□□□□ 0.93
PMS1-221ENST00000624204 TONSLQ96HA7 1378 aa20.87■□□□□ 0.93
PMS1-221ENST00000624204 TIMELESSQ9UNS1 1208 aa20.86■□□□□ 0.93
PMS1-221ENST00000624204 ERICH6BQ5W0A0 696 aa20.83■□□□□ 0.92
PMS1-221ENST00000624204 IL27Q8NEV9 243 aa20.82■□□□□ 0.92
PMS1-221ENST00000624204 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
PMS1-221ENST00000624204 ANP32AP39687 249 aaKnown RBP20.79■□□□□ 0.92
PMS1-221ENST00000624204 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
PMS1-221ENST00000624204 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
PMS1-221ENST00000624204 CCDC184Q52MB2 194 aa20.76■□□□□ 0.91
PMS1-221ENST00000624204 EIF5BO60841 1220 aaKnown RBP20.76■□□□□ 0.91
PMS1-221ENST00000624204 PHLDB1Q86UU1 1377 aa20.76■□□□□ 0.91
PMS1-221ENST00000624204 ZBTB47Q9UFB7 747 aaPredicted RBP20.75■□□□□ 0.91
PMS1-221ENST00000624204 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
PMS1-221ENST00000624204 MRS2Q9HD23 443 aa20.7■□□□□ 0.9
PMS1-221ENST00000624204 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
PMS1-221ENST00000624204 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
PMS1-221ENST00000624204 WASHC2AQ641Q2 1341 aa20.65■□□□□ 0.9
PMS1-221ENST00000624204 KIF27Q86VH2 1401 aa20.64■□□□□ 0.9
PMS1-221ENST00000624204 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
PMS1-221ENST00000624204 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
PMS1-221ENST00000624204 TIAM1Q13009 1591 aa20.61■□□□□ 0.89
PMS1-221ENST00000624204 ZBED9Q6R2W3 1325 aa20.58■□□□□ 0.89
PMS1-221ENST00000624204 PRKRIP1Q9H875 184 aaPredicted RBP20.55■□□□□ 0.88
PMS1-221ENST00000624204 NEFMP07197 916 aa20.55■□□□□ 0.88
PMS1-221ENST00000624204 EIF4G2P78344 907 aaKnown RBP eCLIP20.54■□□□□ 0.88
PMS1-221ENST00000624204 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
PMS1-221ENST00000624204 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
PMS1-221ENST00000624204 FHAD1B1AJZ9 1412 aa20.52■□□□□ 0.88
PMS1-221ENST00000624204 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
PMS1-221ENST00000624204 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
PMS1-221ENST00000624204 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
PMS1-221ENST00000624204 PEG3Q9GZU2 1588 aa20.48■□□□□ 0.87
PMS1-221ENST00000624204 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
PMS1-221ENST00000624204 CNTLNQ9NXG0 1405 aa20.46■□□□□ 0.87
PMS1-221ENST00000624204 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
PMS1-221ENST00000624204 C11orf95C9JLR9 678 aaPredicted RBP20.46■□□□□ 0.87
PMS1-221ENST00000624204 FOXD1Q16676 465 aa20.44■□□□□ 0.86
PMS1-221ENST00000624204 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
PMS1-221ENST00000624204 MAP3K1Q13233 1512 aa20.43■□□□□ 0.86
PMS1-221ENST00000624204 UACAQ9BZF9 1416 aa20.42■□□□□ 0.86
PMS1-221ENST00000624204 CUX1P39880 1505 aa20.41■□□□□ 0.86
PMS1-221ENST00000624204 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
PMS1-221ENST00000624204 SKAP1Q86WV1 359 aa20.4■□□□□ 0.86
PMS1-221ENST00000624204 RRP7BPQ9NSQ0 103 aa20.4■□□□□ 0.86
PMS1-221ENST00000624204 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
PMS1-221ENST00000624204 SLC4A3P48751 1232 aa20.39■□□□□ 0.85
PMS1-221ENST00000624204 ARXQ96QS3 562 aa20.37■□□□□ 0.85
PMS1-221ENST00000624204 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
PMS1-221ENST00000624204 CARMIL1Q5VZK9 1371 aa20.35■□□□□ 0.85
PMS1-221ENST00000624204 IGF1RP08069 1367 aa20.35■□□□□ 0.85
PMS1-221ENST00000624204 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.851e-9■■■■□ 22.4
PMS1-221ENST00000624204 SMG6Q86US8 1419 aaKnown RBP20.33■□□□□ 0.85
PMS1-221ENST00000624204 FHOD3Q2V2M9 1422 aa20.33■□□□□ 0.85
PMS1-221ENST00000624204 USP35Q9P2H5 1018 aa20.33■□□□□ 0.84
PMS1-221ENST00000624204 UBE2Q2Q8WVN8 375 aa20.33■□□□□ 0.84
PMS1-221ENST00000624204 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.84
PMS1-221ENST00000624204 PTPRKQ15262 1439 aa20.32■□□□□ 0.84
PMS1-221ENST00000624204 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
PMS1-221ENST00000624204 PCF11O94913 1555 aaKnown RBP20.31■□□□□ 0.84
PMS1-221ENST00000624204 NCOA2Q15596 1464 aa20.31■□□□□ 0.84
PMS1-221ENST00000624204 PPM1GO15355 546 aaPredicted RBP20.31■□□□□ 0.84
PMS1-221ENST00000624204 PDE4AP27815 886 aa20.31■□□□□ 0.84
PMS1-221ENST00000624204 HFM1A2PYH4 1435 aa20.3■□□□□ 0.84
PMS1-221ENST00000624204 MTUS2Q5JR59 1369 aa20.3■□□□□ 0.84
PMS1-221ENST00000624204 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
PMS1-221ENST00000624204 KDM5BQ9UGL1 1544 aa20.28■□□□□ 0.84
PMS1-221ENST00000624204 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
PMS1-221ENST00000624204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.83
PMS1-221ENST00000624204 NAIPQ13075 1403 aa20.26■□□□□ 0.83
PMS1-221ENST00000624204 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
PMS1-221ENST00000624204 EXOC6Q8TAG9 804 aa20.26■□□□□ 0.83
PMS1-221ENST00000624204 NCOA1Q15788 1441 aa20.25■□□□□ 0.83
PMS1-221ENST00000624204 DAXXQ9UER7 740 aaPredicted RBP20.25■□□□□ 0.83
PMS1-221ENST00000624204 TCERG1O14776 1098 aaKnown RBP20.25■□□□□ 0.83
PMS1-221ENST00000624204 WASHC2CQ9Y4E1 1318 aa20.25■□□□□ 0.83
PMS1-221ENST00000624204 RNF123Q5XPI4 1314 aa20.24■□□□□ 0.83
PMS1-221ENST00000624204 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms