RNA–Protein interactions for RNA: ENST00000623115.3

ERCC6-210, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2

Gene ERCC6, Length 2,932 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-210ENST00000623115 ERICH3Q5RHP9 1530 aa13.47□□□□□ -0.25
ERCC6-210ENST00000623115 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
ERCC6-210ENST00000623115 ANP32CO43423 234 aa13.44□□□□□ -0.26
ERCC6-210ENST00000623115 HNRNPUQ00839 825 aaKnown RBP eCLIP13.44□□□□□ -0.26
ERCC6-210ENST00000623115 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
ERCC6-210ENST00000623115 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
ERCC6-210ENST00000623115 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
ERCC6-210ENST00000623115 CCNB3Q8WWL7 1395 aa13.43□□□□□ -0.26
ERCC6-210ENST00000623115 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
ERCC6-210ENST00000623115 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
ERCC6-210ENST00000623115 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
ERCC6-210ENST00000623115 NBR1Q14596 966 aa13.42□□□□□ -0.26
ERCC6-210ENST00000623115 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
ERCC6-210ENST00000623115 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
ERCC6-210ENST00000623115 CUX1P39880 1505 aa13.37□□□□□ -0.27
ERCC6-210ENST00000623115 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
ERCC6-210ENST00000623115 MAPKBP1O60336 1514 aa13.36□□□□□ -0.27
ERCC6-210ENST00000623115 B4GALNT3Q6L9W6 998 aa13.36□□□□□ -0.27
ERCC6-210ENST00000623115 CUX2O14529 1486 aa13.36□□□□□ -0.27
ERCC6-210ENST00000623115 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
ERCC6-210ENST00000623115 DEKP35659 375 aaKnown RBP13.33□□□□□ -0.27
ERCC6-210ENST00000623115 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
ERCC6-210ENST00000623115 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
ERCC6-210ENST00000623115 FAM9BQ8IZU0 186 aa13.29□□□□□ -0.28
ERCC6-210ENST00000623115 IGF1RP08069 1367 aa13.28□□□□□ -0.28
ERCC6-210ENST00000623115 CFTRP13569 1480 aa13.28□□□□□ -0.28
ERCC6-210ENST00000623115 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
ERCC6-210ENST00000623115 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.29
ERCC6-210ENST00000623115 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
ERCC6-210ENST00000623115 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
ERCC6-210ENST00000623115 PHLDB1Q86UU1 1377 aa13.25□□□□□ -0.29
ERCC6-210ENST00000623115 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
ERCC6-210ENST00000623115 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
ERCC6-210ENST00000623115 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
ERCC6-210ENST00000623115 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
ERCC6-210ENST00000623115 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
ERCC6-210ENST00000623115 TONSLQ96HA7 1378 aa13.22□□□□□ -0.29
ERCC6-210ENST00000623115 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
ERCC6-210ENST00000623115 LRRC9Q6ZRR7 1453 aa13.21□□□□□ -0.29
ERCC6-210ENST00000623115 MAP3K1Q13233 1512 aa13.2□□□□□ -0.3
ERCC6-210ENST00000623115 CCDC136Q96JN2 1154 aa13.2□□□□□ -0.3
ERCC6-210ENST00000623115 TIMELESSQ9UNS1 1208 aa13.19□□□□□ -0.3
ERCC6-210ENST00000623115 POLR3GLQ9BT43 218 aa13.17□□□□□ -0.3
ERCC6-210ENST00000623115 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
ERCC6-210ENST00000623115 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
ERCC6-210ENST00000623115 NOP58Q9Y2X3 529 aaKnown RBP13.15□□□□□ -0.3
ERCC6-210ENST00000623115 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
ERCC6-210ENST00000623115 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
ERCC6-210ENST00000623115 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
ERCC6-210ENST00000623115 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
ERCC6-210ENST00000623115 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
ERCC6-210ENST00000623115 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
ERCC6-210ENST00000623115 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
ERCC6-210ENST00000623115 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
ERCC6-210ENST00000623115 FOXD1Q16676 465 aa13.12□□□□□ -0.31
ERCC6-210ENST00000623115 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
ERCC6-210ENST00000623115 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
ERCC6-210ENST00000623115 DAXXQ9UER7 740 aaPredicted RBP13.11□□□□□ -0.31
ERCC6-210ENST00000623115 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
ERCC6-210ENST00000623115 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
ERCC6-210ENST00000623115 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
ERCC6-210ENST00000623115 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
ERCC6-210ENST00000623115 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
ERCC6-210ENST00000623115 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
ERCC6-210ENST00000623115 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
ERCC6-210ENST00000623115 AKNAQ7Z591 1439 aa13.06□□□□□ -0.32
ERCC6-210ENST00000623115 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
ERCC6-210ENST00000623115 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
ERCC6-210ENST00000623115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
ERCC6-210ENST00000623115 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
ERCC6-210ENST00000623115 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.32
ERCC6-210ENST00000623115 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.32
ERCC6-210ENST00000623115 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.33
ERCC6-210ENST00000623115 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
ERCC6-210ENST00000623115 PRDM2Q13029 1718 aa13.01□□□□□ -0.33
ERCC6-210ENST00000623115 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
ERCC6-210ENST00000623115 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
ERCC6-210ENST00000623115 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
ERCC6-210ENST00000623115 PTPRKQ15262 1439 aa13□□□□□ -0.33
ERCC6-210ENST00000623115 FGD6Q6ZV73 1430 aa13□□□□□ -0.33
ERCC6-210ENST00000623115 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
ERCC6-210ENST00000623115 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
ERCC6-210ENST00000623115 ZNF326Q5BKZ1 582 aaKnown RBP13□□□□□ -0.33
ERCC6-210ENST00000623115 SKAP1Q86WV1 359 aa13□□□□□ -0.33
ERCC6-210ENST00000623115 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
ERCC6-210ENST00000623115 KCNA4P22459 653 aa12.99□□□□□ -0.33
ERCC6-210ENST00000623115 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
ERCC6-210ENST00000623115 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
ERCC6-210ENST00000623115 UACAQ9BZF9 1416 aa12.97□□□□□ -0.33
ERCC6-210ENST00000623115 L3MBTL2Q969R5 705 aa12.97□□□□□ -0.33
ERCC6-210ENST00000623115 EFCAB5A4FU69 1503 aa12.97□□□□□ -0.33
ERCC6-210ENST00000623115 IPO9Q96P70 1041 aaKnown RBP12.96□□□□□ -0.33
ERCC6-210ENST00000623115 HFM1A2PYH4 1435 aa12.96□□□□□ -0.34
ERCC6-210ENST00000623115 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
ERCC6-210ENST00000623115 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
ERCC6-210ENST00000623115 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
ERCC6-210ENST00000623115 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
ERCC6-210ENST00000623115 NEFMP07197 916 aa12.92□□□□□ -0.34
ERCC6-210ENST00000623115 NAIPQ13075 1403 aa12.92□□□□□ -0.34
ERCC6-210ENST00000623115 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms