RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
AGAP3-226ENST00000622464 PCF11O94913 1555 aaKnown RBP19.52■□□□□ 0.71
AGAP3-226ENST00000622464 FAM50AQ14320 339 aaKnown RBP19.51■□□□□ 0.71
AGAP3-226ENST00000622464 ABCA5Q8WWZ7 1642 aa19.5■□□□□ 0.71
AGAP3-226ENST00000622464 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
AGAP3-226ENST00000622464 TIAM1Q13009 1591 aa19.48■□□□□ 0.71
AGAP3-226ENST00000622464 CUL7Q14999 1698 aa19.48■□□□□ 0.71
AGAP3-226ENST00000622464 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
AGAP3-226ENST00000622464 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
AGAP3-226ENST00000622464 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
AGAP3-226ENST00000622464 RRBP1Q9P2E9 1410 aaKnown RBP19.44■□□□□ 0.7
AGAP3-226ENST00000622464 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
AGAP3-226ENST00000622464 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
AGAP3-226ENST00000622464 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
AGAP3-226ENST00000622464 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
AGAP3-226ENST00000622464 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
AGAP3-226ENST00000622464 DIEXFQ68CQ4 756 aaKnown RBP19.4■□□□□ 0.7
AGAP3-226ENST00000622464 ERCC6Q03468 1493 aa19.4■□□□□ 0.7
AGAP3-226ENST00000622464 DHX57Q6P158 1386 aaKnown RBP19.38■□□□□ 0.69
AGAP3-226ENST00000622464 FBLN2P98095 1184 aa19.36■□□□□ 0.69
AGAP3-226ENST00000622464 PBRM1Q86U86 1689 aa19.33■□□□□ 0.68
AGAP3-226ENST00000622464 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
AGAP3-226ENST00000622464 CASKIN1Q8WXD9 1431 aa19.32■□□□□ 0.68
AGAP3-226ENST00000622464 ZNF316A6NFI3 1004 aaPredicted RBP19.31■□□□□ 0.68
AGAP3-226ENST00000622464 FYCO1Q9BQS8 1478 aa19.3■□□□□ 0.68
AGAP3-226ENST00000622464 RAB3GAP2Q9H2M9 1393 aa19.3■□□□□ 0.68
AGAP3-226ENST00000622464 MTUS2Q5JR59 1369 aa19.29■□□□□ 0.68
AGAP3-226ENST00000622464 CFAP43Q8NDM7 1665 aa19.29■□□□□ 0.68
AGAP3-226ENST00000622464 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
AGAP3-226ENST00000622464 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
AGAP3-226ENST00000622464 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
AGAP3-226ENST00000622464 MAP3K1Q13233 1512 aa19.25■□□□□ 0.67
AGAP3-226ENST00000622464 ADAMTS12P58397 1594 aa19.25■□□□□ 0.67
AGAP3-226ENST00000622464 LRRIQ1Q96JM4 1722 aa19.24■□□□□ 0.67
AGAP3-226ENST00000622464 SAMD9Q5K651 1589 aa19.24■□□□□ 0.67
AGAP3-226ENST00000622464 WDR62O43379 1518 aa19.23■□□□□ 0.67
AGAP3-226ENST00000622464 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
AGAP3-226ENST00000622464 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
AGAP3-226ENST00000622464 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
AGAP3-226ENST00000622464 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
AGAP3-226ENST00000622464 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
AGAP3-226ENST00000622464 CHMP7Q8WUX9 453 aaPredicted RBP19.18■□□□□ 0.66
AGAP3-226ENST00000622464 CDK13Q14004 1512 aaKnown RBP19.17■□□□□ 0.66
AGAP3-226ENST00000622464 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
AGAP3-226ENST00000622464 YTHDC1Q96MU7 727 aaKnown RBP19.16■□□□□ 0.66
AGAP3-226ENST00000622464 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
AGAP3-226ENST00000622464 MAGI3Q5TCQ9 1506 aa19.15■□□□□ 0.66
AGAP3-226ENST00000622464 FGD6Q6ZV73 1430 aa19.14■□□□□ 0.65
AGAP3-226ENST00000622464 NCOA2Q15596 1464 aa19.14■□□□□ 0.65
AGAP3-226ENST00000622464 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
AGAP3-226ENST00000622464 PTPRKQ15262 1439 aa19.11■□□□□ 0.65
AGAP3-226ENST00000622464 MIER1Q8N108 512 aa19.11■□□□□ 0.65
AGAP3-226ENST00000622464 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
AGAP3-226ENST00000622464 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
AGAP3-226ENST00000622464 MAPKBP1O60336 1514 aa19.09■□□□□ 0.65
AGAP3-226ENST00000622464 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
AGAP3-226ENST00000622464 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
AGAP3-226ENST00000622464 MYOM3Q5VTT5 1437 aa19.04■□□□□ 0.64
AGAP3-226ENST00000622464 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
AGAP3-226ENST00000622464 MYT1Q01538 1121 aa19.03■□□□□ 0.64
AGAP3-226ENST00000622464 KIAA0586Q9BVV6 1533 aa19.02■□□□□ 0.64
AGAP3-226ENST00000622464 HIRIP3Q9BW71 556 aaPredicted RBP19.02■□□□□ 0.63
AGAP3-226ENST00000622464 CEP170Q5SW79 1584 aa19■□□□□ 0.63
AGAP3-226ENST00000622464 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
AGAP3-226ENST00000622464 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
AGAP3-226ENST00000622464 HECW1Q76N89 1606 aa19■□□□□ 0.63
AGAP3-226ENST00000622464 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
AGAP3-226ENST00000622464 UGGT2Q9NYU1 1516 aa18.99■□□□□ 0.63
AGAP3-226ENST00000622464 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
AGAP3-226ENST00000622464 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
AGAP3-226ENST00000622464 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
AGAP3-226ENST00000622464 SYNJ2O15056 1496 aa18.96■□□□□ 0.63
AGAP3-226ENST00000622464 CCDC18Q5T9S5 1454 aa18.96■□□□□ 0.63
AGAP3-226ENST00000622464 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
AGAP3-226ENST00000622464 NUP153P49790 1475 aaKnown RBP18.94■□□□□ 0.62
AGAP3-226ENST00000622464 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
AGAP3-226ENST00000622464 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
AGAP3-226ENST00000622464 TRIM52Q96A61 297 aa18.93■□□□□ 0.62
AGAP3-226ENST00000622464 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
AGAP3-226ENST00000622464 FOXD1Q16676 465 aa18.91■□□□□ 0.62
AGAP3-226ENST00000622464 NAIPQ13075 1403 aa18.91■□□□□ 0.62
AGAP3-226ENST00000622464 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
AGAP3-226ENST00000622464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.616e-8■■■□□ 15.4
AGAP3-226ENST00000622464 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
AGAP3-226ENST00000622464 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
AGAP3-226ENST00000622464 RAPGEF6Q8TEU7 1601 aa18.87■□□□□ 0.61
AGAP3-226ENST00000622464 KDM6BO15054 1643 aa18.85■□□□□ 0.61
AGAP3-226ENST00000622464 NUP160Q12769 1436 aa18.82■□□□□ 0.6
AGAP3-226ENST00000622464 CDK11AQ9UQ88 783 aaPredicted RBP18.81■□□□□ 0.6
AGAP3-226ENST00000622464 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
AGAP3-226ENST00000622464 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
AGAP3-226ENST00000622464 CFDP1Q9UEE9 299 aaPredicted RBP18.79■□□□□ 0.6
AGAP3-226ENST00000622464 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
AGAP3-226ENST00000622464 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
AGAP3-226ENST00000622464 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
AGAP3-226ENST00000622464 KIF14Q15058 1648 aa18.78■□□□□ 0.6
AGAP3-226ENST00000622464 DDX10Q13206 875 aaKnown RBP18.78■□□□□ 0.6
AGAP3-226ENST00000622464 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.6
AGAP3-226ENST00000622464 PPP1R15AO75807 674 aaPredicted RBP18.76■□□□□ 0.59
AGAP3-226ENST00000622464 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms