RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 TIAM1Q13009 1591 aa19.3■□□□□ 0.68
SNX12-207ENST00000622277 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
SNX12-207ENST00000622277 RRBP1Q9P2E9 1410 aaKnown RBP19.28■□□□□ 0.68
SNX12-207ENST00000622277 PELP1Q8IZL8 1130 aaKnown RBP19.27■□□□□ 0.68
SNX12-207ENST00000622277 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
SNX12-207ENST00000622277 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
SNX12-207ENST00000622277 PBRM1Q86U86 1689 aa19.25■□□□□ 0.67
SNX12-207ENST00000622277 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
SNX12-207ENST00000622277 WDR62O43379 1518 aa19.24■□□□□ 0.67
SNX12-207ENST00000622277 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNX12-207ENST00000622277 FHOD3Q2V2M9 1422 aa19.22■□□□□ 0.67
SNX12-207ENST00000622277 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
SNX12-207ENST00000622277 SAMD9Q5K651 1589 aa19.21■□□□□ 0.67
SNX12-207ENST00000622277 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
SNX12-207ENST00000622277 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
SNX12-207ENST00000622277 CASKIN1Q8WXD9 1431 aa19.18■□□□□ 0.66
SNX12-207ENST00000622277 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
SNX12-207ENST00000622277 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
SNX12-207ENST00000622277 CCNB3Q8WWL7 1395 aa19.15■□□□□ 0.66
SNX12-207ENST00000622277 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
SNX12-207ENST00000622277 GRIN2BQ13224 1484 aa19.14■□□□□ 0.66
SNX12-207ENST00000622277 FMN1Q68DA7 1419 aa19.14■□□□□ 0.65
SNX12-207ENST00000622277 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
SNX12-207ENST00000622277 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
SNX12-207ENST00000622277 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.65
SNX12-207ENST00000622277 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
SNX12-207ENST00000622277 IQGAP2Q13576 1575 aa19.05■□□□□ 0.64
SNX12-207ENST00000622277 PHLDB1Q86UU1 1377 aa19.05■□□□□ 0.64
SNX12-207ENST00000622277 EIF4G3O43432 1585 aaKnown RBP19.03■□□□□ 0.64
SNX12-207ENST00000622277 LRRIQ1Q96JM4 1722 aa19.01■□□□□ 0.63
SNX12-207ENST00000622277 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
SNX12-207ENST00000622277 DHX57Q6P158 1386 aaKnown RBP19■□□□□ 0.63
SNX12-207ENST00000622277 UGGT2Q9NYU1 1516 aa18.98■□□□□ 0.63
SNX12-207ENST00000622277 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
SNX12-207ENST00000622277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
SNX12-207ENST00000622277 SLC24A1O60721 1099 aa18.95■□□□□ 0.62
SNX12-207ENST00000622277 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
SNX12-207ENST00000622277 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
SNX12-207ENST00000622277 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
SNX12-207ENST00000622277 CCDC18Q5T9S5 1454 aa18.92■□□□□ 0.62
SNX12-207ENST00000622277 HECW1Q76N89 1606 aa18.91■□□□□ 0.62
SNX12-207ENST00000622277 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
SNX12-207ENST00000622277 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
SNX12-207ENST00000622277 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
SNX12-207ENST00000622277 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
SNX12-207ENST00000622277 SUPT6HQ7KZ85 1726 aaKnown RBP18.87■□□□□ 0.61
SNX12-207ENST00000622277 ITGAEP38570 1179 aa18.87■□□□□ 0.61
SNX12-207ENST00000622277 KIAA0556O60303 1618 aa18.87■□□□□ 0.61
SNX12-207ENST00000622277 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
SNX12-207ENST00000622277 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
SNX12-207ENST00000622277 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
SNX12-207ENST00000622277 ACIN1Q9UKV3 1341 aaKnown RBP18.86■□□□□ 0.61
SNX12-207ENST00000622277 NCOA2Q15596 1464 aa18.85■□□□□ 0.61
SNX12-207ENST00000622277 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
SNX12-207ENST00000622277 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
SNX12-207ENST00000622277 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
SNX12-207ENST00000622277 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
SNX12-207ENST00000622277 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
SNX12-207ENST00000622277 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
SNX12-207ENST00000622277 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
SNX12-207ENST00000622277 NEUROD1Q13562 356 aa18.78■□□□□ 0.6
SNX12-207ENST00000622277 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
SNX12-207ENST00000622277 NUP160Q12769 1436 aa18.77■□□□□ 0.6
SNX12-207ENST00000622277 MAPKBP1O60336 1514 aa18.77■□□□□ 0.6
SNX12-207ENST00000622277 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
SNX12-207ENST00000622277 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
SNX12-207ENST00000622277 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
SNX12-207ENST00000622277 RAPGEF6Q8TEU7 1601 aa18.74■□□□□ 0.59
SNX12-207ENST00000622277 TCOF1Q13428 1488 aaKnown RBP18.73■□□□□ 0.59
SNX12-207ENST00000622277 NUP153P49790 1475 aaKnown RBP18.71■□□□□ 0.59
SNX12-207ENST00000622277 PTPRKQ15262 1439 aa18.7■□□□□ 0.58
SNX12-207ENST00000622277 HFM1A2PYH4 1435 aa18.69■□□□□ 0.58
SNX12-207ENST00000622277 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
SNX12-207ENST00000622277 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
SNX12-207ENST00000622277 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.58
SNX12-207ENST00000622277 NAIPQ13075 1403 aa18.62■□□□□ 0.57
SNX12-207ENST00000622277 FBLN2P98095 1184 aa18.62■□□□□ 0.57
SNX12-207ENST00000622277 GTF3C3Q9Y5Q9 886 aa18.62■□□□□ 0.57
SNX12-207ENST00000622277 JPH4Q96JJ6 628 aa18.61■□□□□ 0.57
SNX12-207ENST00000622277 AKNAQ7Z591 1439 aa18.6■□□□□ 0.57
SNX12-207ENST00000622277 GCC2Q8IWJ2 1684 aa18.59■□□□□ 0.57
SNX12-207ENST00000622277 PLB1Q6P1J6 1458 aa18.59■□□□□ 0.57
SNX12-207ENST00000622277 UACAQ9BZF9 1416 aa18.58■□□□□ 0.56
SNX12-207ENST00000622277 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
SNX12-207ENST00000622277 ABCA8O94911 1581 aa18.57■□□□□ 0.56
SNX12-207ENST00000622277 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
SNX12-207ENST00000622277 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
SNX12-207ENST00000622277 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
SNX12-207ENST00000622277 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.56
SNX12-207ENST00000622277 CHD1O14646 1710 aa18.52■□□□□ 0.56
SNX12-207ENST00000622277 DNMT1P26358 1616 aaKnown RBP18.51■□□□□ 0.55
SNX12-207ENST00000622277 PRG4Q92954 1404 aaPredicted RBP18.51■□□□□ 0.55
SNX12-207ENST00000622277 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
SNX12-207ENST00000622277 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
SNX12-207ENST00000622277 DAPK1P53355 1430 aa18.48■□□□□ 0.55
SNX12-207ENST00000622277 KIF14Q15058 1648 aa18.47■□□□□ 0.55
SNX12-207ENST00000622277 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
SNX12-207ENST00000622277 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
SNX12-207ENST00000622277 ABCC5O15440 1437 aa18.45■□□□□ 0.54
SNX12-207ENST00000622277 KDM6BO15054 1643 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms