RNA–Protein interactions for RNA: ENST00000622250.4

CNTNAP4-209, Transcript of contactin associated protein like 4, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP4, Length 3,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4-209ENST00000622250 CHIC2Q9UKJ5 165 aa9.63□□□□□ -0.87
CNTNAP4-209ENST00000622250 SETD5Q9C0A6 1442 aa9.63□□□□□ -0.87
CNTNAP4-209ENST00000622250 RBM19Q9Y4C8 960 aaKnown RBP9.62□□□□□ -0.87
CNTNAP4-209ENST00000622250 FAM9BQ8IZU0 186 aa9.62□□□□□ -0.87
CNTNAP4-209ENST00000622250 ARAP1Q96P48 1450 aa9.6□□□□□ -0.87
CNTNAP4-209ENST00000622250 CUX2O14529 1486 aa9.59□□□□□ -0.87
CNTNAP4-209ENST00000622250 PPP1R15AO75807 674 aaPredicted RBP9.59□□□□□ -0.87
CNTNAP4-209ENST00000622250 CARMIL1Q5VZK9 1371 aa9.59□□□□□ -0.87
CNTNAP4-209ENST00000622250 RRP7BPQ9NSQ0 103 aa9.59□□□□□ -0.87
CNTNAP4-209ENST00000622250 ZNF326Q5BKZ1 582 aaKnown RBP9.58□□□□□ -0.88
CNTNAP4-209ENST00000622250 MTUS2Q5JR59 1369 aa9.57□□□□□ -0.88
CNTNAP4-209ENST00000622250 CCER2I3L3R5 266 aa9.56□□□□□ -0.88
CNTNAP4-209ENST00000622250 RRBP1Q9P2E9 1410 aaKnown RBP9.55□□□□□ -0.88
CNTNAP4-209ENST00000622250 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
CNTNAP4-209ENST00000622250 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
CNTNAP4-209ENST00000622250 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
CNTNAP4-209ENST00000622250 MRS2Q9HD23 443 aa9.54□□□□□ -0.88
CNTNAP4-209ENST00000622250 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.88
CNTNAP4-209ENST00000622250 PHLDB1Q86UU1 1377 aa9.52□□□□□ -0.89
CNTNAP4-209ENST00000622250 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
CNTNAP4-209ENST00000622250 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.89
CNTNAP4-209ENST00000622250 IGF1RP08069 1367 aa9.51□□□□□ -0.89
CNTNAP4-209ENST00000622250 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
CNTNAP4-209ENST00000622250 FHOD3Q2V2M9 1422 aa9.49□□□□□ -0.89
CNTNAP4-209ENST00000622250 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
CNTNAP4-209ENST00000622250 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
CNTNAP4-209ENST00000622250 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
CNTNAP4-209ENST00000622250 NBR1Q14596 966 aa9.48□□□□□ -0.89
CNTNAP4-209ENST00000622250 FOXD1Q16676 465 aa9.48□□□□□ -0.89
CNTNAP4-209ENST00000622250 BICRAQ9NZM4 1560 aa9.47□□□□□ -0.89
CNTNAP4-209ENST00000622250 WDR97A6NE52 1622 aa9.46□□□□□ -0.89
CNTNAP4-209ENST00000622250 RTL5Q5HYW3 569 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP4-209ENST00000622250 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
CNTNAP4-209ENST00000622250 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP4-209ENST00000622250 LRRC9Q6ZRR7 1453 aa9.45□□□□□ -0.9
CNTNAP4-209ENST00000622250 ZNF777Q9ULD5 760 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP4-209ENST00000622250 CUX1P39880 1505 aa9.44□□□□□ -0.9
CNTNAP4-209ENST00000622250 CCDC136Q96JN2 1154 aa9.44□□□□□ -0.9
CNTNAP4-209ENST00000622250 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
CNTNAP4-209ENST00000622250 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
CNTNAP4-209ENST00000622250 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
CNTNAP4-209ENST00000622250 ANP32AP39687 249 aaKnown RBP9.42□□□□□ -0.9
CNTNAP4-209ENST00000622250 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
CNTNAP4-209ENST00000622250 TMC1Q8TDI8 760 aa9.41□□□□□ -0.9
CNTNAP4-209ENST00000622250 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
CNTNAP4-209ENST00000622250 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
CNTNAP4-209ENST00000622250 MPHOSPH9Q99550 1183 aa9.39□□□□□ -0.91
CNTNAP4-209ENST00000622250 MAPKBP1O60336 1514 aa9.39□□□□□ -0.91
CNTNAP4-209ENST00000622250 TDRD9Q8NDG6 1382 aaKnown RBP9.38□□□□□ -0.91
CNTNAP4-209ENST00000622250 KDM2AQ9Y2K7 1162 aa9.38□□□□□ -0.91
CNTNAP4-209ENST00000622250 NCAPD3P42695 1498 aa9.38□□□□□ -0.91
CNTNAP4-209ENST00000622250 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
CNTNAP4-209ENST00000622250 FGD5Q6ZNL6 1462 aa9.38□□□□□ -0.91
CNTNAP4-209ENST00000622250 TIAM1Q13009 1591 aa9.38□□□□□ -0.91
CNTNAP4-209ENST00000622250 WASHC2AQ641Q2 1341 aa9.37□□□□□ -0.91
CNTNAP4-209ENST00000622250 CCDC184Q52MB2 194 aa9.37□□□□□ -0.91
CNTNAP4-209ENST00000622250 CFTRP13569 1480 aa9.37□□□□□ -0.91
CNTNAP4-209ENST00000622250 FBLN2P98095 1184 aa9.37□□□□□ -0.91
CNTNAP4-209ENST00000622250 ZBTB47Q9UFB7 747 aaPredicted RBP9.37□□□□□ -0.91
CNTNAP4-209ENST00000622250 FMN1Q68DA7 1419 aa9.36□□□□□ -0.91
CNTNAP4-209ENST00000622250 MSH5O43196 834 aa9.36□□□□□ -0.91
CNTNAP4-209ENST00000622250 FGD6Q6ZV73 1430 aa9.36□□□□□ -0.91
CNTNAP4-209ENST00000622250 PRKRIP1Q9H875 184 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP4-209ENST00000622250 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP4-209ENST00000622250 RAD54L2Q9Y4B4 1467 aa9.35□□□□□ -0.91
CNTNAP4-209ENST00000622250 NOP58Q9Y2X3 529 aaKnown RBP9.34□□□□□ -0.91
CNTNAP4-209ENST00000622250 DEKP35659 375 aaKnown RBP9.33□□□□□ -0.92
CNTNAP4-209ENST00000622250 UACAQ9BZF9 1416 aa9.33□□□□□ -0.92
CNTNAP4-209ENST00000622250 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
CNTNAP4-209ENST00000622250 FANCIQ9NVI1 1328 aa9.33□□□□□ -0.92
CNTNAP4-209ENST00000622250 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
CNTNAP4-209ENST00000622250 BIVM-ERCC5R4GMW8 1640 aa9.32□□□□□ -0.92
CNTNAP4-209ENST00000622250 CASKIN1Q8WXD9 1431 aa9.3□□□□□ -0.92
CNTNAP4-209ENST00000622250 CARD11Q9BXL7 1154 aa9.29□□□□□ -0.92
CNTNAP4-209ENST00000622250 CFDP1Q9UEE9 299 aaPredicted RBP9.29□□□□□ -0.92
CNTNAP4-209ENST00000622250 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
CNTNAP4-209ENST00000622250 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
CNTNAP4-209ENST00000622250 ZBED9Q6R2W3 1325 aa9.28□□□□□ -0.92
CNTNAP4-209ENST00000622250 MYOM3Q5VTT5 1437 aa9.27□□□□□ -0.92
CNTNAP4-209ENST00000622250 HFM1A2PYH4 1435 aa9.27□□□□□ -0.93
CNTNAP4-209ENST00000622250 PCF11O94913 1555 aaKnown RBP9.27□□□□□ -0.93
CNTNAP4-209ENST00000622250 ANO8Q9HCE9 1232 aaPredicted RBP9.27□□□□□ -0.93
CNTNAP4-209ENST00000622250 CCDC7Q96M83 1385 aa9.27□□□□□ -0.93
CNTNAP4-209ENST00000622250 NCOA2Q15596 1464 aa9.27□□□□□ -0.93
CNTNAP4-209ENST00000622250 FYCO1Q9BQS8 1478 aa9.27□□□□□ -0.93
CNTNAP4-209ENST00000622250 RGL3Q3MIN7 710 aa9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 KIF7Q2M1P5 1343 aa9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 MAP3K1Q13233 1512 aa9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 PKD2Q13563 968 aa9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 NBPF8Q3BBV2 869 aa9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 NUDCQ9Y266 331 aa9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 LAS1LQ9Y4W2 734 aaKnown RBP9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 NAIPQ13075 1403 aa9.26□□□□□ -0.93
CNTNAP4-209ENST00000622250 HMGXB3Q12766 1538 aa9.25□□□□□ -0.93
CNTNAP4-209ENST00000622250 PTPRKQ15262 1439 aa9.25□□□□□ -0.93
CNTNAP4-209ENST00000622250 ZNF644Q9H582 1327 aaPredicted RBP9.25□□□□□ -0.93
CNTNAP4-209ENST00000622250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.25□□□□□ -0.93
CNTNAP4-209ENST00000622250 CNTLNQ9NXG0 1405 aa9.25□□□□□ -0.93
CNTNAP4-209ENST00000622250 TSPY4P0CV99 314 aa9.24□□□□□ -0.93
CNTNAP4-209ENST00000622250 TSPY10P0CW01 314 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms