RNA–Protein interactions for RNA: ENST00000621703.4

NPRL3-213, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best)

Gene NPRL3, Length 2,812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-213ENST00000621703 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
NPRL3-213ENST00000621703 FHOD3Q2V2M9 1422 aa24.7■■□□□ 1.54
NPRL3-213ENST00000621703 ITGAEP38570 1179 aa24.68■■□□□ 1.54
NPRL3-213ENST00000621703 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
NPRL3-213ENST00000621703 WDR97A6NE52 1622 aa24.62■■□□□ 1.53
NPRL3-213ENST00000621703 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
NPRL3-213ENST00000621703 WDR62O43379 1518 aa24.54■■□□□ 1.52
NPRL3-213ENST00000621703 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
NPRL3-213ENST00000621703 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
NPRL3-213ENST00000621703 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
NPRL3-213ENST00000621703 IFT140Q96RY7 1462 aa24.48■■□□□ 1.51
NPRL3-213ENST00000621703 CUL7Q14999 1698 aa24.48■■□□□ 1.51
NPRL3-213ENST00000621703 GRIN2BQ13224 1484 aa24.45■■□□□ 1.51
NPRL3-213ENST00000621703 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
NPRL3-213ENST00000621703 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
NPRL3-213ENST00000621703 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
NPRL3-213ENST00000621703 PCF11O94913 1555 aaKnown RBP24.38■■□□□ 1.49
NPRL3-213ENST00000621703 FAM50AQ14320 339 aaKnown RBP24.35■■□□□ 1.49
NPRL3-213ENST00000621703 TIAM1Q13009 1591 aa24.35■■□□□ 1.49
NPRL3-213ENST00000621703 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
NPRL3-213ENST00000621703 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
NPRL3-213ENST00000621703 CCNB3Q8WWL7 1395 aa24.32■■□□□ 1.48
NPRL3-213ENST00000621703 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
NPRL3-213ENST00000621703 RRBP1Q9P2E9 1410 aaKnown RBP24.3■■□□□ 1.48
NPRL3-213ENST00000621703 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
NPRL3-213ENST00000621703 EFCAB5A4FU69 1503 aa24.26■■□□□ 1.47
NPRL3-213ENST00000621703 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
NPRL3-213ENST00000621703 CASKIN1Q8WXD9 1431 aa24.23■■□□□ 1.47
NPRL3-213ENST00000621703 FMN1Q68DA7 1419 aa24.2■■□□□ 1.47
NPRL3-213ENST00000621703 FYCO1Q9BQS8 1478 aa24.2■■□□□ 1.46
NPRL3-213ENST00000621703 IQGAP2Q13576 1575 aa24.19■■□□□ 1.46
NPRL3-213ENST00000621703 MAP3K1Q13233 1512 aa24.18■■□□□ 1.46
NPRL3-213ENST00000621703 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
NPRL3-213ENST00000621703 MTUS2Q5JR59 1369 aa24.17■■□□□ 1.46
NPRL3-213ENST00000621703 SAMD9Q5K651 1589 aa24.15■■□□□ 1.46
NPRL3-213ENST00000621703 DHX57Q6P158 1386 aaKnown RBP24.12■■□□□ 1.45
NPRL3-213ENST00000621703 CFAP43Q8NDM7 1665 aa24.12■■□□□ 1.45
NPRL3-213ENST00000621703 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
NPRL3-213ENST00000621703 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
NPRL3-213ENST00000621703 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
NPRL3-213ENST00000621703 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.44
NPRL3-213ENST00000621703 KIAA0586Q9BVV6 1533 aa24.07■■□□□ 1.44
NPRL3-213ENST00000621703 LRRIQ1Q96JM4 1722 aa24.05■■□□□ 1.44
NPRL3-213ENST00000621703 DISP1Q96F81 1524 aa24.05■■□□□ 1.44
NPRL3-213ENST00000621703 RAB3GAP2Q9H2M9 1393 aa24.04■■□□□ 1.44
NPRL3-213ENST00000621703 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
NPRL3-213ENST00000621703 PLB1Q6P1J6 1458 aa24.02■■□□□ 1.44
NPRL3-213ENST00000621703 MAGI3Q5TCQ9 1506 aa23.99■■□□□ 1.43
NPRL3-213ENST00000621703 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
NPRL3-213ENST00000621703 ZNF316A6NFI3 1004 aaPredicted RBP23.94■■□□□ 1.42
NPRL3-213ENST00000621703 NCOA2Q15596 1464 aa23.94■■□□□ 1.42
NPRL3-213ENST00000621703 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
NPRL3-213ENST00000621703 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
NPRL3-213ENST00000621703 ZNF777Q9ULD5 760 aaPredicted RBP23.92■■□□□ 1.42
NPRL3-213ENST00000621703 ZNF644Q9H582 1327 aaPredicted RBP23.92■■□□□ 1.42
NPRL3-213ENST00000621703 EPRSP07814 1512 aaKnown RBP23.92■■□□□ 1.42
NPRL3-213ENST00000621703 UGGT2Q9NYU1 1516 aa23.92■■□□□ 1.42
NPRL3-213ENST00000621703 SETD5Q9C0A6 1442 aa23.92■■□□□ 1.42
NPRL3-213ENST00000621703 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
NPRL3-213ENST00000621703 NUP160Q12769 1436 aa23.9■■□□□ 1.42
NPRL3-213ENST00000621703 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.41
NPRL3-213ENST00000621703 RRP7BPQ9NSQ0 103 aa23.89■■□□□ 1.41
NPRL3-213ENST00000621703 CHD1O14646 1710 aa23.88■■□□□ 1.41
NPRL3-213ENST00000621703 PTPRKQ15262 1439 aa23.86■■□□□ 1.41
NPRL3-213ENST00000621703 NUP153P49790 1475 aaKnown RBP23.86■■□□□ 1.41
NPRL3-213ENST00000621703 ERCC6L2Q5T890 1561 aa23.84■■□□□ 1.41
NPRL3-213ENST00000621703 MYOM3Q5VTT5 1437 aa23.83■■□□□ 1.41
NPRL3-213ENST00000621703 SIN3AQ96ST3 1273 aa23.83■■□□□ 1.41
NPRL3-213ENST00000621703 CARMIL2Q6F5E8 1435 aa23.82■■□□□ 1.4
NPRL3-213ENST00000621703 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
NPRL3-213ENST00000621703 HECW1Q76N89 1606 aa23.82■■□□□ 1.4
NPRL3-213ENST00000621703 CLSPNQ9HAW4 1339 aa23.82■■□□□ 1.4
NPRL3-213ENST00000621703 EHBP1L1Q8N3D4 1523 aa23.8■■□□□ 1.4
NPRL3-213ENST00000621703 CCDC18Q5T9S5 1454 aa23.8■■□□□ 1.4
NPRL3-213ENST00000621703 SUPT6HQ7KZ85 1726 aaKnown RBP23.78■■□□□ 1.4
NPRL3-213ENST00000621703 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
NPRL3-213ENST00000621703 MAPKBP1O60336 1514 aa23.76■■□□□ 1.39
NPRL3-213ENST00000621703 PTPRGP23470 1445 aa23.76■■□□□ 1.39
NPRL3-213ENST00000621703 RAPGEF6Q8TEU7 1601 aa23.73■■□□□ 1.39
NPRL3-213ENST00000621703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.398e-7■□□□□ 10.8
NPRL3-213ENST00000621703 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.39
NPRL3-213ENST00000621703 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
NPRL3-213ENST00000621703 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
NPRL3-213ENST00000621703 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
NPRL3-213ENST00000621703 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
NPRL3-213ENST00000621703 FOXD1Q16676 465 aa23.65■■□□□ 1.38
NPRL3-213ENST00000621703 TRIM52Q96A61 297 aa23.64■■□□□ 1.38
NPRL3-213ENST00000621703 NAIPQ13075 1403 aa23.63■■□□□ 1.37
NPRL3-213ENST00000621703 ATP10BO94823 1461 aa23.62■■□□□ 1.37
NPRL3-213ENST00000621703 HFM1A2PYH4 1435 aa23.62■■□□□ 1.37
NPRL3-213ENST00000621703 KIF14Q15058 1648 aa23.61■■□□□ 1.37
NPRL3-213ENST00000621703 MIER1Q8N108 512 aa23.61■■□□□ 1.37
NPRL3-213ENST00000621703 HNRNPMP52272 730 aaKnown RBP eCLIP23.55■■□□□ 1.366e-7■■■■■ 28.7
NPRL3-213ENST00000621703 TROQ12816 1431 aaPredicted RBP23.55■■□□□ 1.36
NPRL3-213ENST00000621703 TCOF1Q13428 1488 aaKnown RBP23.54■■□□□ 1.36
NPRL3-213ENST00000621703 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
NPRL3-213ENST00000621703 YTHDC1Q96MU7 727 aaKnown RBP23.52■■□□□ 1.36
NPRL3-213ENST00000621703 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
NPRL3-213ENST00000621703 ABCA8O94911 1581 aa23.49■■□□□ 1.35
NPRL3-213ENST00000621703 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms