RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 KIF27Q86VH2 1401 aa27■■□□□ 1.91
GTF2I-220ENST00000621640 CUL7Q14999 1698 aa26.98■■□□□ 1.91
GTF2I-220ENST00000621640 KIAA0586Q9BVV6 1533 aa26.95■■□□□ 1.91
GTF2I-220ENST00000621640 KIF13AQ9H1H9 1805 aa26.94■■□□□ 1.9
GTF2I-220ENST00000621640 ADCY10Q96PN6 1610 aa26.88■■□□□ 1.89
GTF2I-220ENST00000621640 MAPKBP1O60336 1514 aa26.85■■□□□ 1.89
GTF2I-220ENST00000621640 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.88
GTF2I-220ENST00000621640 ABCC10Q5T3U5 1492 aa26.82■■□□□ 1.88
GTF2I-220ENST00000621640 DIP2BQ9P265 1576 aa26.77■■□□□ 1.88
GTF2I-220ENST00000621640 NPM1P06748 294 aaKnown RBP eCLIP26.77■■□□□ 1.88
GTF2I-220ENST00000621640 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
GTF2I-220ENST00000621640 FAM69CQ0P6D2 419 aa26.76■■□□□ 1.87
GTF2I-220ENST00000621640 PTPRGP23470 1445 aa26.7■■□□□ 1.86
GTF2I-220ENST00000621640 IQGAP2Q13576 1575 aa26.69■■□□□ 1.86
GTF2I-220ENST00000621640 CARMIL2Q6F5E8 1435 aa26.65■■□□□ 1.86
GTF2I-220ENST00000621640 TNIKQ9UKE5 1360 aa26.65■■□□□ 1.86
GTF2I-220ENST00000621640 DISP1Q96F81 1524 aa26.6■■□□□ 1.85
GTF2I-220ENST00000621640 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
GTF2I-220ENST00000621640 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
GTF2I-220ENST00000621640 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
GTF2I-220ENST00000621640 UHRF1BP1LA0JNW5 1464 aa26.54■■□□□ 1.84
GTF2I-220ENST00000621640 UGGT2Q9NYU1 1516 aa26.54■■□□□ 1.84
GTF2I-220ENST00000621640 KDM6BO15054 1643 aa26.52■■□□□ 1.84
GTF2I-220ENST00000621640 TSPOAP1O95153 1857 aa26.52■■□□□ 1.84
GTF2I-220ENST00000621640 ASXL2Q76L83 1435 aa26.5■■□□□ 1.83
GTF2I-220ENST00000621640 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
GTF2I-220ENST00000621640 PLB1Q6P1J6 1458 aa26.48■■□□□ 1.83
GTF2I-220ENST00000621640 KIAA0556O60303 1618 aa26.46■■□□□ 1.83
GTF2I-220ENST00000621640 GLI2P10070 1586 aa26.45■■□□□ 1.82
GTF2I-220ENST00000621640 KDM5BQ9UGL1 1544 aa26.43■■□□□ 1.82
GTF2I-220ENST00000621640 PPRC1Q5VV67 1664 aaKnown RBP26.41■■□□□ 1.82
GTF2I-220ENST00000621640 CTTNBP2Q8WZ74 1663 aa26.37■■□□□ 1.81
GTF2I-220ENST00000621640 ZCCHC11Q5TAX3 1644 aaKnown RBP26.36■■□□□ 1.81
GTF2I-220ENST00000621640 EPRSP07814 1512 aaKnown RBP26.35■■□□□ 1.81
GTF2I-220ENST00000621640 PRXQ9BXM0 1461 aa26.32■■□□□ 1.8
GTF2I-220ENST00000621640 MAP3K4Q9Y6R4 1608 aa26.31■■□□□ 1.8
GTF2I-220ENST00000621640 KDM4FA0A1W2PPD8 638 aa26.3■■□□□ 1.8
GTF2I-220ENST00000621640 GOLGA3Q08378 1498 aa26.27■■□□□ 1.8
GTF2I-220ENST00000621640 COL17A1Q9UMD9 1497 aaPredicted RBP26.24■■□□□ 1.79
GTF2I-220ENST00000621640 WDR7Q9Y4E6 1490 aa26.24■■□□□ 1.79
GTF2I-220ENST00000621640 ABCA8O94911 1581 aa26.24■■□□□ 1.79
GTF2I-220ENST00000621640 TEX14Q8IWB6 1497 aa26.2■■□□□ 1.78
GTF2I-220ENST00000621640 ADGRL1O94910 1474 aa26.09■■□□□ 1.77
GTF2I-220ENST00000621640 MAGI3Q5TCQ9 1506 aa26.08■■□□□ 1.77
GTF2I-220ENST00000621640 CFAP43Q8NDM7 1665 aa26.07■■□□□ 1.76
GTF2I-220ENST00000621640 CD109Q6YHK3 1445 aa26.06■■□□□ 1.76
GTF2I-220ENST00000621640 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
GTF2I-220ENST00000621640 KCNH8Q96L42 1107 aa26.03■■□□□ 1.76
GTF2I-220ENST00000621640 SAMD9Q5K651 1589 aa26.03■■□□□ 1.76
GTF2I-220ENST00000621640 P3H3Q8IVL6 736 aa26.02■■□□□ 1.76
GTF2I-220ENST00000621640 ATP10BO94823 1461 aa26■■□□□ 1.75
GTF2I-220ENST00000621640 ARID3CA6NKF2 412 aa25.98■■□□□ 1.75
GTF2I-220ENST00000621640 EEA1Q15075 1411 aa25.93■■□□□ 1.74
GTF2I-220ENST00000621640 RAPGEF6Q8TEU7 1601 aa25.92■■□□□ 1.74
GTF2I-220ENST00000621640 FAM9AQ8IZU1 332 aaPredicted RBP25.9■■□□□ 1.74
GTF2I-220ENST00000621640 ABCA9Q8IUA7 1624 aa25.89■■□□□ 1.74
GTF2I-220ENST00000621640 ARAP3Q8WWN8 1544 aa25.87■■□□□ 1.73
GTF2I-220ENST00000621640 NUP153P49790 1475 aaKnown RBP25.85■■□□□ 1.73
GTF2I-220ENST00000621640 FHOD3Q2V2M9 1422 aa25.83■■□□□ 1.73
GTF2I-220ENST00000621640 KIF21BO75037 1637 aa25.8■■□□□ 1.72
GTF2I-220ENST00000621640 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
GTF2I-220ENST00000621640 PHLDB1Q86UU1 1377 aa25.76■■□□□ 1.71
GTF2I-220ENST00000621640 HECW2Q9P2P5 1572 aa25.75■■□□□ 1.71
GTF2I-220ENST00000621640 NEO1Q92859 1461 aa25.74■■□□□ 1.71
GTF2I-220ENST00000621640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
GTF2I-220ENST00000621640 HNRNPUL2Q1KMD3 747 aaKnown RBP25.74■■□□□ 1.71
GTF2I-220ENST00000621640 EFCAB5A4FU69 1503 aa25.73■■□□□ 1.71
GTF2I-220ENST00000621640 FRMPD1Q5SYB0 1578 aa25.7■■□□□ 1.71
GTF2I-220ENST00000621640 RAPGEF3O95398 923 aa25.69■■□□□ 1.7
GTF2I-220ENST00000621640 PLEKHD1A6NEE1 506 aa25.63■■□□□ 1.69
GTF2I-220ENST00000621640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.62■■□□□ 1.69
GTF2I-220ENST00000621640 ADAMTSL3P82987 1691 aa25.6■■□□□ 1.69
GTF2I-220ENST00000621640 CDK13Q14004 1512 aaKnown RBP25.59■■□□□ 1.69
GTF2I-220ENST00000621640 TTC37Q6PGP7 1564 aa25.59■■□□□ 1.69
GTF2I-220ENST00000621640 FANCAO15360 1455 aa25.57■■□□□ 1.68
GTF2I-220ENST00000621640 RICTORQ6R327 1708 aa25.56■■□□□ 1.68
GTF2I-220ENST00000621640 AKNAQ7Z591 1439 aa25.55■■□□□ 1.68
GTF2I-220ENST00000621640 DENND4BO75064 1496 aaPredicted RBP25.55■■□□□ 1.68
GTF2I-220ENST00000621640 ARHGEF40Q8TER5 1519 aa25.55■■□□□ 1.68
GTF2I-220ENST00000621640 CFAP74Q9C0B2 1584 aa25.55■■□□□ 1.68
GTF2I-220ENST00000621640 ILDR1Q86SU0 546 aaPredicted RBP25.54■■□□□ 1.68
GTF2I-220ENST00000621640 PTPRMP28827 1452 aa25.53■■□□□ 1.68
GTF2I-220ENST00000621640 BCORL1Q5H9F3 1711 aa25.52■■□□□ 1.68
GTF2I-220ENST00000621640 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
GTF2I-220ENST00000621640 ARHGAP35Q9NRY4 1499 aa25.51■■□□□ 1.67
GTF2I-220ENST00000621640 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
GTF2I-220ENST00000621640 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
GTF2I-220ENST00000621640 ZMYM4Q5VZL5 1548 aa25.48■■□□□ 1.67
GTF2I-220ENST00000621640 MADDQ8WXG6 1647 aa25.48■■□□□ 1.67
GTF2I-220ENST00000621640 FMN1Q68DA7 1419 aa25.47■■□□□ 1.67
GTF2I-220ENST00000621640 HECW1Q76N89 1606 aa25.47■■□□□ 1.67
GTF2I-220ENST00000621640 ARID4BQ4LE39 1312 aaPredicted RBP25.45■■□□□ 1.66
GTF2I-220ENST00000621640 PLCH2O75038 1416 aa25.43■■□□□ 1.66
GTF2I-220ENST00000621640 YEATS2Q9ULM3 1422 aa25.41■■□□□ 1.66
GTF2I-220ENST00000621640 ZFYVE16Q7Z3T8 1539 aa25.41■■□□□ 1.66
GTF2I-220ENST00000621640 SIGLEC1Q9BZZ2 1709 aa25.4■■□□□ 1.66
GTF2I-220ENST00000621640 POGZQ7Z3K3 1410 aa25.38■■□□□ 1.65
GTF2I-220ENST00000621640 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
GTF2I-220ENST00000621640 MAGI2Q86UL8 1455 aa25.38■■□□□ 1.65
GTF2I-220ENST00000621640 KIF14Q15058 1648 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms