RNA–Protein interactions for RNA: ENST00000621218.4

PLP1-223, Transcript of proteolipid protein 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene PLP1, Length 3,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLP1-223	ENST00000621218	IRX6	P78412	446 aa	Predicted RBP	12.95	□□□□□ -0.34
PLP1-223	ENST00000621218	ANP32C	O43423	234 aa		12.95	□□□□□ -0.34
PLP1-223	ENST00000621218	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
PLP1-223	ENST00000621218	SETD5	Q9C0A6	1442 aa		12.94	□□□□□ -0.34
PLP1-223	ENST00000621218	ARHGAP35	Q9NRY4	1499 aa		12.93	□□□□□ -0.34
PLP1-223	ENST00000621218	BIVM-ERCC5	R4GMW8	1640 aa		12.9	□□□□□ -0.34
PLP1-223	ENST00000621218	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.9	□□□□□ -0.34
PLP1-223	ENST00000621218	ERICH6	Q7L0X2	663 aa		12.89	□□□□□ -0.35
PLP1-223	ENST00000621218	ATAD2B	Q9ULI0	1458 aa		12.88	□□□□□ -0.35
PLP1-223	ENST00000621218	PHLDB1	Q86UU1	1377 aa		12.86	□□□□□ -0.35
PLP1-223	ENST00000621218	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
PLP1-223	ENST00000621218	TIMELESS	Q9UNS1	1208 aa		12.85	□□□□□ -0.35
PLP1-223	ENST00000621218	DEK	P35659	375 aa	Known RBP	12.85	□□□□□ -0.35
PLP1-223	ENST00000621218	TIAM1	Q13009	1591 aa		12.84	□□□□□ -0.35
PLP1-223	ENST00000621218	PRKCSH	P14314	528 aa	Predicted RBP	12.84	□□□□□ -0.35
PLP1-223	ENST00000621218	FAM50A	Q14320	339 aa	Known RBP	12.84	□□□□□ -0.35
PLP1-223	ENST00000621218	LRRC9	Q6ZRR7	1453 aa		12.81	□□□□□ -0.36
PLP1-223	ENST00000621218	KIF27	Q86VH2	1401 aa		12.8	□□□□□ -0.36
PLP1-223	ENST00000621218	CUX1	P39880	1505 aa		12.8	□□□□□ -0.36
PLP1-223	ENST00000621218	MAP3K1	Q13233	1512 aa		12.78	□□□□□ -0.36
PLP1-223	ENST00000621218	PPP4R2	Q9NY27	417 aa		12.77	□□□□□ -0.36
PLP1-223	ENST00000621218	B4GALNT3	Q6L9W6	998 aa		12.76	□□□□□ -0.37
PLP1-223	ENST00000621218	CCDC184	Q52MB2	194 aa		12.76	□□□□□ -0.37
PLP1-223	ENST00000621218	MYT1L	Q9UL68	1186 aa		12.76	□□□□□ -0.37
PLP1-223	ENST00000621218	PAK3	O75914	559 aa	Predicted RBP	12.75	□□□□□ -0.37
PLP1-223	ENST00000621218	TONSL	Q96HA7	1378 aa		12.74	□□□□□ -0.37
PLP1-223	ENST00000621218	NBR1	Q14596	966 aa		12.74	□□□□□ -0.37
PLP1-223	ENST00000621218	ERICH6B	Q5W0A0	696 aa		12.74	□□□□□ -0.37
PLP1-223	ENST00000621218	NOP58	Q9Y2X3	529 aa	Known RBP	12.71	□□□□□ -0.38
PLP1-223	ENST00000621218	WASHC2A	Q641Q2	1341 aa		12.71	□□□□□ -0.38
PLP1-223	ENST00000621218	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.7	□□□□□ -0.38
PLP1-223	ENST00000621218	KDM5B	Q9UGL1	1544 aa		12.69	□□□□□ -0.38
PLP1-223	ENST00000621218	IGF1R	P08069	1367 aa		12.69	□□□□□ -0.38
PLP1-223	ENST00000621218	P3H3	Q8IVL6	736 aa		12.68	□□□□□ -0.38
PLP1-223	ENST00000621218	CFAP43	Q8NDM7	1665 aa		12.68	□□□□□ -0.38
PLP1-223	ENST00000621218	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.67	□□□□□ -0.38
PLP1-223	ENST00000621218	FHAD1	B1AJZ9	1412 aa		12.67	□□□□□ -0.38
PLP1-223	ENST00000621218	PCF11	O94913	1555 aa	Known RBP	12.67	□□□□□ -0.38
PLP1-223	ENST00000621218	HSPA5	P11021	654 aa	Known RBP	12.65	□□□□□ -0.38
PLP1-223	ENST00000621218	CCDC18	Q5T9S5	1454 aa		12.65	□□□□□ -0.38
PLP1-223	ENST00000621218	FAM9B	Q8IZU0	186 aa		12.65	□□□□□ -0.38
PLP1-223	ENST00000621218	PTPRK	Q15262	1439 aa		12.64	□□□□□ -0.39
PLP1-223	ENST00000621218	AQR	O60306	1485 aa	Known RBP eCLIP	12.64	□□□□□ -0.39
PLP1-223	ENST00000621218	UACA	Q9BZF9	1416 aa		12.63	□□□□□ -0.39
PLP1-223	ENST00000621218	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
PLP1-223	ENST00000621218	C11orf95	C9JLR9	678 aa	Predicted RBP	12.62	□□□□□ -0.39
PLP1-223	ENST00000621218	CARMIL1	Q5VZK9	1371 aa		12.62	□□□□□ -0.39
PLP1-223	ENST00000621218	ZBED9	Q6R2W3	1325 aa		12.61	□□□□□ -0.39
PLP1-223	ENST00000621218	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.61	□□□□□ -0.39
PLP1-223	ENST00000621218	SALL2	Q9Y467	1007 aa	Predicted RBP	12.61	□□□□□ -0.39
PLP1-223	ENST00000621218	NCOA2	Q15596	1464 aa		12.6	□□□□□ -0.39
PLP1-223	ENST00000621218	HFM1	A2PYH4	1435 aa		12.6	□□□□□ -0.39
PLP1-223	ENST00000621218	PTPN23	Q9H3S7	1636 aa		12.59	□□□□□ -0.39
PLP1-223	ENST00000621218	FGD6	Q6ZV73	1430 aa		12.59	□□□□□ -0.39
PLP1-223	ENST00000621218	CNTLN	Q9NXG0	1405 aa		12.59	□□□□□ -0.39
PLP1-223	ENST00000621218	MRS2	Q9HD23	443 aa		12.59	□□□□□ -0.39
PLP1-223	ENST00000621218	FHOD3	Q2V2M9	1422 aa		12.58	□□□□□ -0.39
PLP1-223	ENST00000621218	IPO9	Q96P70	1041 aa	Known RBP	12.58	□□□□□ -0.4
PLP1-223	ENST00000621218	IL27	Q8NEV9	243 aa		12.58	□□□□□ -0.4
PLP1-223	ENST00000621218	NAIP	Q13075	1403 aa		12.57	□□□□□ -0.4
PLP1-223	ENST00000621218	AKNA	Q7Z591	1439 aa		12.57	□□□□□ -0.4
PLP1-223	ENST00000621218	CFTR	P13569	1480 aa		12.56	□□□□□ -0.4
PLP1-223	ENST00000621218	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
PLP1-223	ENST00000621218	FYCO1	Q9BQS8	1478 aa		12.54	□□□□□ -0.4
PLP1-223	ENST00000621218	DENND4B	O75064	1496 aa	Predicted RBP	12.54	□□□□□ -0.4
PLP1-223	ENST00000621218	ANP32A	P39687	249 aa	Known RBP	12.54	□□□□□ -0.4
PLP1-223	ENST00000621218	HMGXB3	Q12766	1538 aa		12.53	□□□□□ -0.4
PLP1-223	ENST00000621218	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.53	□□□□□ -0.4
PLP1-223	ENST00000621218	CCDC7	Q96M83	1385 aa		12.53	□□□□□ -0.4
PLP1-223	ENST00000621218	FGD5	Q6ZNL6	1462 aa		12.53	□□□□□ -0.4
PLP1-223	ENST00000621218	CASKIN1	Q8WXD9	1431 aa		12.53	□□□□□ -0.4
PLP1-223	ENST00000621218	NCOA1	Q15788	1441 aa		12.52	□□□□□ -0.41
PLP1-223	ENST00000621218	NCAPD3	P42695	1498 aa		12.52	□□□□□ -0.41
PLP1-223	ENST00000621218	RTL5	Q5HYW3	569 aa	Predicted RBP	12.52	□□□□□ -0.41
PLP1-223	ENST00000621218	RTN4	Q9NQC3	1192 aa	Known RBP	12.52	□□□□□ -0.41
PLP1-223	ENST00000621218	CCDC136	Q96JN2	1154 aa		12.51	□□□□□ -0.41
PLP1-223	ENST00000621218	SENP3-EIF4A1	A0A087X0R7	540 aa		12.5	□□□□□ -0.41
PLP1-223	ENST00000621218	RNF123	Q5XPI4	1314 aa		12.5	□□□□□ -0.41
PLP1-223	ENST00000621218	SMG6	Q86US8	1419 aa	Known RBP	12.5	□□□□□ -0.41
PLP1-223	ENST00000621218	L3MBTL2	Q969R5	705 aa		12.49	□□□□□ -0.41
PLP1-223	ENST00000621218	FMN1	Q68DA7	1419 aa		12.49	□□□□□ -0.41
PLP1-223	ENST00000621218	RRP7BP	Q9NSQ0	103 aa		12.48	□□□□□ -0.41
PLP1-223	ENST00000621218	MTUS2	Q5JR59	1369 aa		12.47	□□□□□ -0.41
PLP1-223	ENST00000621218	NUDC	Q9Y266	331 aa		12.47	□□□□□ -0.41
PLP1-223	ENST00000621218	KIF7	Q2M1P5	1343 aa		12.46	□□□□□ -0.41
PLP1-223	ENST00000621218	FOXD1	Q16676	465 aa		12.46	□□□□□ -0.41
PLP1-223	ENST00000621218	NBPF8	Q3BBV2	869 aa		12.46	□□□□□ -0.41
PLP1-223	ENST00000621218	CHIC2	Q9UKJ5	165 aa		12.46	□□□□□ -0.41
PLP1-223	ENST00000621218	LRRIQ1	Q96JM4	1722 aa		12.46	□□□□□ -0.42
PLP1-223	ENST00000621218	CC2D2A	Q9P2K1	1620 aa		12.46	□□□□□ -0.42
PLP1-223	ENST00000621218	SNAPC4	Q5SXM2	1469 aa		12.45	□□□□□ -0.42
PLP1-223	ENST00000621218	KDM6B	O15054	1643 aa		12.45	□□□□□ -0.42
PLP1-223	ENST00000621218	CNGB1	Q14028	1251 aa	Predicted RBP	12.45	□□□□□ -0.42
PLP1-223	ENST00000621218	MYOM3	Q5VTT5	1437 aa		12.44	□□□□□ -0.42
PLP1-223	ENST00000621218	EFCAB5	A4FU69	1503 aa		12.43	□□□□□ -0.42
PLP1-223	ENST00000621218	NPM2	Q86SE8	214 aa	Known RBP	12.43	□□□□□ -0.42
PLP1-223	ENST00000621218	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.43	□□□□□ -0.42
PLP1-223	ENST00000621218	LAS1L	Q9Y4W2	734 aa	Known RBP	12.43	□□□□□ -0.42
PLP1-223	ENST00000621218	SPATA31E1	Q6ZUB1	1445 aa		12.43	□□□□□ -0.42
PLP1-223	ENST00000621218	HECW1	Q76N89	1606 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms