RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
SYNRG-229ENST00000621136 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
SYNRG-229ENST00000621136 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.34
SYNRG-229ENST00000621136 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
SYNRG-229ENST00000621136 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
SYNRG-229ENST00000621136 NEFMP07197 916 aa17.15■□□□□ 0.34
SYNRG-229ENST00000621136 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
SYNRG-229ENST00000621136 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
SYNRG-229ENST00000621136 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
SYNRG-229ENST00000621136 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
SYNRG-229ENST00000621136 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
SYNRG-229ENST00000621136 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
SYNRG-229ENST00000621136 KIF21BO75037 1637 aa17.08■□□□□ 0.32
SYNRG-229ENST00000621136 FAM50AQ14320 339 aaKnown RBP17.06■□□□□ 0.32
SYNRG-229ENST00000621136 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
SYNRG-229ENST00000621136 SIN3AQ96ST3 1273 aa17.04■□□□□ 0.32
SYNRG-229ENST00000621136 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
SYNRG-229ENST00000621136 MSH5O43196 834 aa16.99■□□□□ 0.31
SYNRG-229ENST00000621136 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
SYNRG-229ENST00000621136 CCNB3Q8WWL7 1395 aa16.97■□□□□ 0.31
SYNRG-229ENST00000621136 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
SYNRG-229ENST00000621136 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.3
SYNRG-229ENST00000621136 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
SYNRG-229ENST00000621136 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
SYNRG-229ENST00000621136 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
SYNRG-229ENST00000621136 PPP1R15AO75807 674 aaPredicted RBP16.88■□□□□ 0.29
SYNRG-229ENST00000621136 ZNF326Q5BKZ1 582 aaKnown RBP16.87■□□□□ 0.29
SYNRG-229ENST00000621136 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
SYNRG-229ENST00000621136 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
SYNRG-229ENST00000621136 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
SYNRG-229ENST00000621136 ERICH6BQ5W0A0 696 aa16.84■□□□□ 0.29
SYNRG-229ENST00000621136 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
SYNRG-229ENST00000621136 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
SYNRG-229ENST00000621136 ARID3AQ99856 593 aa16.81■□□□□ 0.28
SYNRG-229ENST00000621136 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
SYNRG-229ENST00000621136 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
SYNRG-229ENST00000621136 PKNOX2Q96KN3 472 aa16.8■□□□□ 0.28
SYNRG-229ENST00000621136 SETD5Q9C0A6 1442 aa16.78■□□□□ 0.28
SYNRG-229ENST00000621136 P3H3Q8IVL6 736 aa16.77■□□□□ 0.28
SYNRG-229ENST00000621136 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.27
SYNRG-229ENST00000621136 CUX2O14529 1486 aa16.74■□□□□ 0.27
SYNRG-229ENST00000621136 FANCIQ9NVI1 1328 aa16.74■□□□□ 0.27
SYNRG-229ENST00000621136 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
SYNRG-229ENST00000621136 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
SYNRG-229ENST00000621136 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
SYNRG-229ENST00000621136 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
SYNRG-229ENST00000621136 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
SYNRG-229ENST00000621136 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
SYNRG-229ENST00000621136 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
SYNRG-229ENST00000621136 PODXL2Q9NZ53 605 aa16.65■□□□□ 0.26
SYNRG-229ENST00000621136 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
SYNRG-229ENST00000621136 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
SYNRG-229ENST00000621136 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
SYNRG-229ENST00000621136 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
SYNRG-229ENST00000621136 IPO9Q96P70 1041 aaKnown RBP16.64■□□□□ 0.25
SYNRG-229ENST00000621136 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
SYNRG-229ENST00000621136 TRIM44Q96DX7 344 aaPredicted RBP16.62■□□□□ 0.25
SYNRG-229ENST00000621136 HSP90AA1P07900 732 aaKnown RBP16.62■□□□□ 0.25
SYNRG-229ENST00000621136 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
SYNRG-229ENST00000621136 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
SYNRG-229ENST00000621136 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
SYNRG-229ENST00000621136 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
SYNRG-229ENST00000621136 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
SYNRG-229ENST00000621136 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
SYNRG-229ENST00000621136 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
SYNRG-229ENST00000621136 TMC1Q8TDI8 760 aa16.55■□□□□ 0.24
SYNRG-229ENST00000621136 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
SYNRG-229ENST00000621136 GZF1Q9H116 711 aaPredicted RBP16.55■□□□□ 0.24
SYNRG-229ENST00000621136 RGS3P49796 1198 aa16.54■□□□□ 0.24
SYNRG-229ENST00000621136 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
SYNRG-229ENST00000621136 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
SYNRG-229ENST00000621136 TIAM1Q13009 1591 aa16.52■□□□□ 0.23
SYNRG-229ENST00000621136 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
SYNRG-229ENST00000621136 SPRYD3Q8NCJ5 442 aa16.51■□□□□ 0.23
SYNRG-229ENST00000621136 HSPA5P11021 654 aaKnown RBP16.51■□□□□ 0.23
SYNRG-229ENST00000621136 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
SYNRG-229ENST00000621136 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
SYNRG-229ENST00000621136 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
SYNRG-229ENST00000621136 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
SYNRG-229ENST00000621136 CUX1P39880 1505 aa16.49■□□□□ 0.23
SYNRG-229ENST00000621136 GSE1Q14687 1217 aa16.47■□□□□ 0.23
SYNRG-229ENST00000621136 UPF2Q9HAU5 1272 aaKnown RBP16.47■□□□□ 0.23
SYNRG-229ENST00000621136 SLKQ9H2G2 1235 aaPredicted RBP16.45■□□□□ 0.22
SYNRG-229ENST00000621136 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
SYNRG-229ENST00000621136 CHIC2Q9UKJ5 165 aa16.44■□□□□ 0.22
SYNRG-229ENST00000621136 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
SYNRG-229ENST00000621136 IGF1RP08069 1367 aa16.43■□□□□ 0.22
SYNRG-229ENST00000621136 TNNT2P45379 298 aaPredicted RBP16.43■□□□□ 0.22
SYNRG-229ENST00000621136 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
SYNRG-229ENST00000621136 RRP7BPQ9NSQ0 103 aa16.42■□□□□ 0.22
SYNRG-229ENST00000621136 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
SYNRG-229ENST00000621136 CCDC18Q5T9S5 1454 aa16.41■□□□□ 0.22
SYNRG-229ENST00000621136 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
SYNRG-229ENST00000621136 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
SYNRG-229ENST00000621136 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
SYNRG-229ENST00000621136 NCLP19338 710 aaKnown RBP16.37■□□□□ 0.21
SYNRG-229ENST00000621136 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
SYNRG-229ENST00000621136 FOXD1Q16676 465 aa16.37■□□□□ 0.21
SYNRG-229ENST00000621136 DNTTIP2Q5QJE6 756 aaKnown RBP16.37■□□□□ 0.21
SYNRG-229ENST00000621136 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms