RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 KIAA0586Q9BVV6 1533 aa40.79■■■■■ 4.12
THSD4-207ENST00000620694 JPH4Q96JJ6 628 aa40.79■■■■■ 4.12
THSD4-207ENST00000620694 SHROOM2Q13796 1616 aa40.78■■■■■ 4.12
THSD4-207ENST00000620694 EEA1Q15075 1411 aa40.73■■■■■ 4.11
THSD4-207ENST00000620694 CSRNP3Q8WYN3 585 aa40.71■■■■■ 4.11
THSD4-207ENST00000620694 PRG4Q92954 1404 aaPredicted RBP40.7■■■■■ 4.11
THSD4-207ENST00000620694 ERCC6L2Q5T890 1561 aa40.69■■■■■ 4.1
THSD4-207ENST00000620694 PRXQ9BXM0 1461 aa40.68■■■■■ 4.1
THSD4-207ENST00000620694 FAM9AQ8IZU1 332 aaPredicted RBP40.62■■■■■ 4.09
THSD4-207ENST00000620694 IQGAP2Q13576 1575 aa40.53■■■■■ 4.08
THSD4-207ENST00000620694 CARMIL2Q6F5E8 1435 aa40.39■■■■■ 4.06
THSD4-207ENST00000620694 CTTNBP2Q8WZ74 1663 aa40.34■■■■■ 4.05
THSD4-207ENST00000620694 UGGT2Q9NYU1 1516 aa40.32■■■■■ 4.05
THSD4-207ENST00000620694 DISP1Q96F81 1524 aa40.26■■■■■ 4.03
THSD4-207ENST00000620694 TNIKQ9UKE5 1360 aa40.25■■■■■ 4.03
THSD4-207ENST00000620694 KIF21BO75037 1637 aa40.25■■■■■ 4.03
THSD4-207ENST00000620694 PTPRGP23470 1445 aa40.23■■■■■ 4.03
THSD4-207ENST00000620694 TTBK1Q5TCY1 1321 aaPredicted RBP40.21■■■■■ 4.03
THSD4-207ENST00000620694 KIAA0556O60303 1618 aa40.15■■■■■ 4.02
THSD4-207ENST00000620694 GOLGA3Q08378 1498 aa40.14■■■■■ 4.02
THSD4-207ENST00000620694 EHMT2Q96KQ7 1210 aa40.1■■■■■ 4.01
THSD4-207ENST00000620694 TRHP20396 242 aaPredicted RBP40.05■■■■■ 4
THSD4-207ENST00000620694 UBTFP17480 764 aaKnown RBP40.03■■■■■ 4
THSD4-207ENST00000620694 NPM1P06748 294 aaKnown RBP eCLIP40.02■■■■■ 4
THSD4-207ENST00000620694 ADCY10Q96PN6 1610 aa40■■■■□ 3.99
THSD4-207ENST00000620694 RANGAP1P46060 587 aaPredicted RBP39.96■■■■□ 3.99
THSD4-207ENST00000620694 UACAQ9BZF9 1416 aa39.94■■■■□ 3.98
THSD4-207ENST00000620694 P3H3Q8IVL6 736 aa39.94■■■■□ 3.98
THSD4-207ENST00000620694 UHRF1BP1LA0JNW5 1464 aa39.88■■■■□ 3.98
THSD4-207ENST00000620694 SAMD9Q5K651 1589 aa39.87■■■■□ 3.97
THSD4-207ENST00000620694 ABCC2Q92887 1545 aa39.84■■■■□ 3.97
THSD4-207ENST00000620694 PLB1Q6P1J6 1458 aa39.79■■■■□ 3.96
THSD4-207ENST00000620694 MAPKBP1O60336 1514 aa39.77■■■■□ 3.96
THSD4-207ENST00000620694 EFCAB5A4FU69 1503 aa39.74■■■■□ 3.95
THSD4-207ENST00000620694 FHOD3Q2V2M9 1422 aa39.71■■■■□ 3.95
THSD4-207ENST00000620694 ABCA8O94911 1581 aa39.71■■■■□ 3.95
THSD4-207ENST00000620694 KDM5BQ9UGL1 1544 aa39.68■■■■□ 3.94
THSD4-207ENST00000620694 ABCC10Q5T3U5 1492 aa39.61■■■■□ 3.93
THSD4-207ENST00000620694 ASXL2Q76L83 1435 aa39.58■■■■□ 3.93
THSD4-207ENST00000620694 FAM69CQ0P6D2 419 aa39.58■■■■□ 3.93
THSD4-207ENST00000620694 ZCCHC11Q5TAX3 1644 aaKnown RBP39.57■■■■□ 3.92
THSD4-207ENST00000620694 ARHGAP35Q9NRY4 1499 aa39.55■■■■□ 3.92
THSD4-207ENST00000620694 DIP2BQ9P265 1576 aa39.5■■■■□ 3.91
THSD4-207ENST00000620694 RAPGEF6Q8TEU7 1601 aa39.5■■■■□ 3.91
THSD4-207ENST00000620694 ARID3CA6NKF2 412 aa39.49■■■■□ 3.91
THSD4-207ENST00000620694 KIF13AQ9H1H9 1805 aa39.47■■■■□ 3.91
THSD4-207ENST00000620694 ATP10BO94823 1461 aa39.42■■■■□ 3.9
THSD4-207ENST00000620694 FMN1Q68DA7 1419 aa39.4■■■■□ 3.9
THSD4-207ENST00000620694 NUP153P49790 1475 aaKnown RBP39.38■■■■□ 3.9
THSD4-207ENST00000620694 WDR7Q9Y4E6 1490 aa39.38■■■■□ 3.9
THSD4-207ENST00000620694 CLIP1P30622 1438 aa39.36■■■■□ 3.89
THSD4-207ENST00000620694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.35■■■■□ 3.89
THSD4-207ENST00000620694 HNRNPUL2Q1KMD3 747 aaKnown RBP39.35■■■■□ 3.89
THSD4-207ENST00000620694 EPRSP07814 1512 aaKnown RBP39.34■■■■□ 3.89
THSD4-207ENST00000620694 GLI2P10070 1586 aa39.3■■■■□ 3.88
THSD4-207ENST00000620694 LOC105371045A0A1W2PR82 267 aa39.3■■■■□ 3.88
THSD4-207ENST00000620694 KCNH8Q96L42 1107 aa39.27■■■■□ 3.88
THSD4-207ENST00000620694 ATP1B4Q9UN42 357 aaPredicted RBP39.26■■■■□ 3.88
THSD4-207ENST00000620694 CEP162Q5TB80 1403 aa39.18■■■■□ 3.86
THSD4-207ENST00000620694 HECW1Q76N89 1606 aa39.17■■■■□ 3.86
THSD4-207ENST00000620694 PLEKHD1A6NEE1 506 aa39.14■■■■□ 3.86
THSD4-207ENST00000620694 TSPOAP1O95153 1857 aa39.12■■■■□ 3.85
THSD4-207ENST00000620694 CDK13Q14004 1512 aaKnown RBP39.1■■■■□ 3.85
THSD4-207ENST00000620694 MAP3K4Q9Y6R4 1608 aa39.1■■■■□ 3.85
THSD4-207ENST00000620694 CASKIN1Q8WXD9 1431 aa39.08■■■■□ 3.85
THSD4-207ENST00000620694 CD109Q6YHK3 1445 aa39.05■■■■□ 3.84
THSD4-207ENST00000620694 PCF11O94913 1555 aaKnown RBP39.04■■■■□ 3.84
THSD4-207ENST00000620694 CDK11AQ9UQ88 783 aaPredicted RBP39■■■■□ 3.83
THSD4-207ENST00000620694 PPRC1Q5VV67 1664 aaKnown RBP39■■■■□ 3.83
THSD4-207ENST00000620694 TEX14Q8IWB6 1497 aa38.99■■■■□ 3.83
THSD4-207ENST00000620694 CFAP43Q8NDM7 1665 aa38.99■■■■□ 3.83
THSD4-207ENST00000620694 FYCO1Q9BQS8 1478 aa38.98■■■■□ 3.83
THSD4-207ENST00000620694 MAGI3Q5TCQ9 1506 aa38.94■■■■□ 3.82
THSD4-207ENST00000620694 CCDC18Q5T9S5 1454 aa38.93■■■■□ 3.82
THSD4-207ENST00000620694 ABCA9Q8IUA7 1624 aa38.92■■■■□ 3.82
THSD4-207ENST00000620694 KDM6BO15054 1643 aa38.89■■■■□ 3.82
THSD4-207ENST00000620694 LRRIQ1Q96JM4 1722 aa38.86■■■■□ 3.81
THSD4-207ENST00000620694 TROQ12816 1431 aaPredicted RBP38.82■■■■□ 3.81
THSD4-207ENST00000620694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.79■■■■□ 3.8
THSD4-207ENST00000620694 TTC37Q6PGP7 1564 aa38.72■■■■□ 3.79
THSD4-207ENST00000620694 COL17A1Q9UMD9 1497 aaPredicted RBP38.72■■■■□ 3.79
THSD4-207ENST00000620694 VPS8Q8N3P4 1428 aa38.71■■■■□ 3.79
THSD4-207ENST00000620694 KIF14Q15058 1648 aa38.71■■■■□ 3.79
THSD4-207ENST00000620694 PHLDB1Q86UU1 1377 aa38.68■■■■□ 3.78
THSD4-207ENST00000620694 NEO1Q92859 1461 aa38.66■■■■□ 3.78
THSD4-207ENST00000620694 PLCH2O75038 1416 aa38.61■■■■□ 3.77
THSD4-207ENST00000620694 FANCAO15360 1455 aa38.59■■■■□ 3.77
THSD4-207ENST00000620694 ARAP3Q8WWN8 1544 aa38.58■■■■□ 3.77
THSD4-207ENST00000620694 MTUS2Q5JR59 1369 aa38.57■■■■□ 3.77
THSD4-207ENST00000620694 AKNAQ7Z591 1439 aa38.53■■■■□ 3.76
THSD4-207ENST00000620694 CFAP74Q9C0B2 1584 aa38.52■■■■□ 3.76
THSD4-207ENST00000620694 MYO5CQ9NQX4 1742 aa38.5■■■■□ 3.75
THSD4-207ENST00000620694 EFCAB2Q5VUJ9 269 aa38.5■■■■□ 3.75
THSD4-207ENST00000620694 EHBP1L1Q8N3D4 1523 aa38.45■■■■□ 3.75
THSD4-207ENST00000620694 RAPGEF3O95398 923 aa38.45■■■■□ 3.75
THSD4-207ENST00000620694 ARHGAP5Q13017 1502 aa38.44■■■■□ 3.74
THSD4-207ENST00000620694 TIAM1Q13009 1591 aa38.43■■■■□ 3.74
THSD4-207ENST00000620694 DENND4BO75064 1496 aaPredicted RBP38.41■■■■□ 3.74
THSD4-207ENST00000620694 ADGRL1O94910 1474 aa38.39■■■■□ 3.74
THSD4-207ENST00000620694 SCAPERQ9BY12 1400 aa38.36■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms