RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 PRXQ9BXM0 1461 aa18.16■□□□□ 0.5
TARDBP-223ENST00000620632 EEA1Q15075 1411 aa18.13■□□□□ 0.49
TARDBP-223ENST00000620632 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
TARDBP-223ENST00000620632 KIAA0586Q9BVV6 1533 aa18.12■□□□□ 0.49
TARDBP-223ENST00000620632 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
TARDBP-223ENST00000620632 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
TARDBP-223ENST00000620632 CTTNBP2Q8WZ74 1663 aa18.09■□□□□ 0.49
TARDBP-223ENST00000620632 IQGAP2Q13576 1575 aa18.07■□□□□ 0.48
TARDBP-223ENST00000620632 JPH4Q96JJ6 628 aa18.06■□□□□ 0.48
TARDBP-223ENST00000620632 PRG4Q92954 1404 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-223ENST00000620632 KIF21BO75037 1637 aa18.03■□□□□ 0.48
TARDBP-223ENST00000620632 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.48
TARDBP-223ENST00000620632 UGGT2Q9NYU1 1516 aa17.97■□□□□ 0.47
TARDBP-223ENST00000620632 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
TARDBP-223ENST00000620632 KIAA0556O60303 1618 aa17.92■□□□□ 0.46
TARDBP-223ENST00000620632 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
TARDBP-223ENST00000620632 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
TARDBP-223ENST00000620632 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
TARDBP-223ENST00000620632 ADCY10Q96PN6 1610 aa17.84■□□□□ 0.45
TARDBP-223ENST00000620632 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
TARDBP-223ENST00000620632 SAMD9Q5K651 1589 aa17.83■□□□□ 0.45
TARDBP-223ENST00000620632 PTPRGP23470 1445 aa17.81■□□□□ 0.44
TARDBP-223ENST00000620632 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
TARDBP-223ENST00000620632 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
TARDBP-223ENST00000620632 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
TARDBP-223ENST00000620632 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
TARDBP-223ENST00000620632 PLB1Q6P1J6 1458 aa17.72■□□□□ 0.43
TARDBP-223ENST00000620632 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
TARDBP-223ENST00000620632 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
TARDBP-223ENST00000620632 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
TARDBP-223ENST00000620632 ABCA8O94911 1581 aa17.71■□□□□ 0.43
TARDBP-223ENST00000620632 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
TARDBP-223ENST00000620632 FHOD3Q2V2M9 1422 aa17.71■□□□□ 0.43
TARDBP-223ENST00000620632 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
TARDBP-223ENST00000620632 MAPKBP1O60336 1514 aa17.66■□□□□ 0.42
TARDBP-223ENST00000620632 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
TARDBP-223ENST00000620632 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
TARDBP-223ENST00000620632 KDM5BQ9UGL1 1544 aa17.64■□□□□ 0.41
TARDBP-223ENST00000620632 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
TARDBP-223ENST00000620632 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
TARDBP-223ENST00000620632 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
TARDBP-223ENST00000620632 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
TARDBP-223ENST00000620632 DIP2BQ9P265 1576 aa17.57■□□□□ 0.4
TARDBP-223ENST00000620632 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
TARDBP-223ENST00000620632 CLIP1P30622 1438 aa17.55■□□□□ 0.4
TARDBP-223ENST00000620632 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
TARDBP-223ENST00000620632 ABCC10Q5T3U5 1492 aa17.55■□□□□ 0.4
TARDBP-223ENST00000620632 ATP10BO94823 1461 aa17.54■□□□□ 0.4
TARDBP-223ENST00000620632 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
TARDBP-223ENST00000620632 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
TARDBP-223ENST00000620632 CEP162Q5TB80 1403 aa17.52■□□□□ 0.4
TARDBP-223ENST00000620632 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
TARDBP-223ENST00000620632 PCF11O94913 1555 aaKnown RBP17.49■□□□□ 0.39
TARDBP-223ENST00000620632 WDR7Q9Y4E6 1490 aa17.48■□□□□ 0.39
TARDBP-223ENST00000620632 CDK13Q14004 1512 aaKnown RBP17.47■□□□□ 0.39
TARDBP-223ENST00000620632 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
TARDBP-223ENST00000620632 TSPOAP1O95153 1857 aa17.47■□□□□ 0.39
TARDBP-223ENST00000620632 EPRSP07814 1512 aaKnown RBP17.47■□□□□ 0.39
TARDBP-223ENST00000620632 GLI2P10070 1586 aa17.46■□□□□ 0.39
TARDBP-223ENST00000620632 FAM69CQ0P6D2 419 aa17.46■□□□□ 0.39
TARDBP-223ENST00000620632 PPRC1Q5VV67 1664 aaKnown RBP17.44■□□□□ 0.38
TARDBP-223ENST00000620632 MAP3K4Q9Y6R4 1608 aa17.43■□□□□ 0.38
TARDBP-223ENST00000620632 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
TARDBP-223ENST00000620632 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
TARDBP-223ENST00000620632 ATP1B4Q9UN42 357 aaPredicted RBP17.38■□□□□ 0.37
TARDBP-223ENST00000620632 CFAP43Q8NDM7 1665 aa17.37■□□□□ 0.37
TARDBP-223ENST00000620632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
TARDBP-223ENST00000620632 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
TARDBP-223ENST00000620632 KCNH8Q96L42 1107 aa17.36■□□□□ 0.37
TARDBP-223ENST00000620632 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
TARDBP-223ENST00000620632 MAGI3Q5TCQ9 1506 aa17.33■□□□□ 0.37
TARDBP-223ENST00000620632 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
TARDBP-223ENST00000620632 KIF14Q15058 1648 aa17.31■□□□□ 0.36
TARDBP-223ENST00000620632 TTC37Q6PGP7 1564 aa17.31■□□□□ 0.36
TARDBP-223ENST00000620632 PLEKHD1A6NEE1 506 aa17.3■□□□□ 0.36
TARDBP-223ENST00000620632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.36
TARDBP-223ENST00000620632 CD109Q6YHK3 1445 aa17.29■□□□□ 0.36
TARDBP-223ENST00000620632 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
TARDBP-223ENST00000620632 TROQ12816 1431 aaPredicted RBP17.27■□□□□ 0.35
TARDBP-223ENST00000620632 KDM6BO15054 1643 aa17.24■□□□□ 0.35
TARDBP-223ENST00000620632 TEX14Q8IWB6 1497 aa17.24■□□□□ 0.35
TARDBP-223ENST00000620632 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
TARDBP-223ENST00000620632 MYO5CQ9NQX4 1742 aa17.21■□□□□ 0.35
TARDBP-223ENST00000620632 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-223ENST00000620632 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
TARDBP-223ENST00000620632 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
TARDBP-223ENST00000620632 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
TARDBP-223ENST00000620632 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
TARDBP-223ENST00000620632 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
TARDBP-223ENST00000620632 PLCH2O75038 1416 aa17.14■□□□□ 0.33
TARDBP-223ENST00000620632 FANCAO15360 1455 aa17.13■□□□□ 0.33
TARDBP-223ENST00000620632 NEO1Q92859 1461 aa17.13■□□□□ 0.33
TARDBP-223ENST00000620632 CFAP74Q9C0B2 1584 aa17.13■□□□□ 0.33
TARDBP-223ENST00000620632 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
TARDBP-223ENST00000620632 MAP3K1Q13233 1512 aa17.12■□□□□ 0.33
TARDBP-223ENST00000620632 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
TARDBP-223ENST00000620632 FRMPD1Q5SYB0 1578 aa17.11■□□□□ 0.33
TARDBP-223ENST00000620632 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
TARDBP-223ENST00000620632 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
TARDBP-223ENST00000620632 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms