RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 JPH4Q96JJ6 628 aa16.91■□□□□ 0.3
NBPF3-213ENST00000619554 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
NBPF3-213ENST00000619554 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
NBPF3-213ENST00000619554 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
NBPF3-213ENST00000619554 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
NBPF3-213ENST00000619554 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
NBPF3-213ENST00000619554 HRCP23327 699 aa16.82■□□□□ 0.28
NBPF3-213ENST00000619554 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
NBPF3-213ENST00000619554 PRG4Q92954 1404 aaPredicted RBP16.81■□□□□ 0.28
NBPF3-213ENST00000619554 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
NBPF3-213ENST00000619554 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
NBPF3-213ENST00000619554 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
NBPF3-213ENST00000619554 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
NBPF3-213ENST00000619554 P3H3Q8IVL6 736 aa16.73■□□□□ 0.27
NBPF3-213ENST00000619554 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
NBPF3-213ENST00000619554 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
NBPF3-213ENST00000619554 SHROOM2Q13796 1616 aa16.72■□□□□ 0.27
NBPF3-213ENST00000619554 CYB5RLQ6IPT4 315 aa16.69■□□□□ 0.26
NBPF3-213ENST00000619554 PTPRGP23470 1445 aa16.68■□□□□ 0.26
NBPF3-213ENST00000619554 DISP1Q96F81 1524 aa16.68■□□□□ 0.26
NBPF3-213ENST00000619554 CLIP1P30622 1438 aa16.67■□□□□ 0.26
NBPF3-213ENST00000619554 CEP162Q5TB80 1403 aa16.65■□□□□ 0.26
NBPF3-213ENST00000619554 ERCC6L2Q5T890 1561 aa16.65■□□□□ 0.26
NBPF3-213ENST00000619554 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
NBPF3-213ENST00000619554 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
NBPF3-213ENST00000619554 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
NBPF3-213ENST00000619554 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
NBPF3-213ENST00000619554 KIAA0556O60303 1618 aa16.63■□□□□ 0.25
NBPF3-213ENST00000619554 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
NBPF3-213ENST00000619554 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
NBPF3-213ENST00000619554 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
NBPF3-213ENST00000619554 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
NBPF3-213ENST00000619554 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
NBPF3-213ENST00000619554 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
NBPF3-213ENST00000619554 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
NBPF3-213ENST00000619554 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
NBPF3-213ENST00000619554 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
NBPF3-213ENST00000619554 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
NBPF3-213ENST00000619554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
NBPF3-213ENST00000619554 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
NBPF3-213ENST00000619554 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
NBPF3-213ENST00000619554 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
NBPF3-213ENST00000619554 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
NBPF3-213ENST00000619554 ABCA8O94911 1581 aa16.43■□□□□ 0.22
NBPF3-213ENST00000619554 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
NBPF3-213ENST00000619554 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
NBPF3-213ENST00000619554 APLP2Q06481 763 aa16.41■□□□□ 0.22
NBPF3-213ENST00000619554 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
NBPF3-213ENST00000619554 RAPGEF6Q8TEU7 1601 aa16.4■□□□□ 0.22
NBPF3-213ENST00000619554 ADCY10Q96PN6 1610 aa16.4■□□□□ 0.22
NBPF3-213ENST00000619554 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
NBPF3-213ENST00000619554 NUP153P49790 1475 aaKnown RBP16.38■□□□□ 0.21
NBPF3-213ENST00000619554 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
NBPF3-213ENST00000619554 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
NBPF3-213ENST00000619554 ATP10BO94823 1461 aa16.37■□□□□ 0.21
NBPF3-213ENST00000619554 HECW1Q76N89 1606 aa16.36■□□□□ 0.21
NBPF3-213ENST00000619554 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
NBPF3-213ENST00000619554 PCF11O94913 1555 aaKnown RBP16.33■□□□□ 0.21
NBPF3-213ENST00000619554 EPRSP07814 1512 aaKnown RBP16.33■□□□□ 0.2
NBPF3-213ENST00000619554 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
NBPF3-213ENST00000619554 ASXL2Q76L83 1435 aa16.31■□□□□ 0.2
NBPF3-213ENST00000619554 KCNH8Q96L42 1107 aa16.31■□□□□ 0.2
NBPF3-213ENST00000619554 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
NBPF3-213ENST00000619554 CDK13Q14004 1512 aaKnown RBP16.29■□□□□ 0.2
NBPF3-213ENST00000619554 ZCCHC11Q5TAX3 1644 aaKnown RBP16.28■□□□□ 0.2
NBPF3-213ENST00000619554 MAPKBP1O60336 1514 aa16.27■□□□□ 0.2
NBPF3-213ENST00000619554 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
NBPF3-213ENST00000619554 WDR7Q9Y4E6 1490 aa16.26■□□□□ 0.19
NBPF3-213ENST00000619554 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
NBPF3-213ENST00000619554 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
NBPF3-213ENST00000619554 MAP3K1Q13233 1512 aa16.2■□□□□ 0.18
NBPF3-213ENST00000619554 ABCC10Q5T3U5 1492 aa16.2■□□□□ 0.18
NBPF3-213ENST00000619554 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
NBPF3-213ENST00000619554 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
NBPF3-213ENST00000619554 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
NBPF3-213ENST00000619554 TIAM1Q13009 1591 aa16.18■□□□□ 0.18
NBPF3-213ENST00000619554 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
NBPF3-213ENST00000619554 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
NBPF3-213ENST00000619554 EHBP1L1Q8N3D4 1523 aa16.13■□□□□ 0.17
NBPF3-213ENST00000619554 LRRIQ1Q96JM4 1722 aa16.12■□□□□ 0.17
NBPF3-213ENST00000619554 MAGI3Q5TCQ9 1506 aa16.12■□□□□ 0.17
NBPF3-213ENST00000619554 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
NBPF3-213ENST00000619554 KIF14Q15058 1648 aa16.11■□□□□ 0.17
NBPF3-213ENST00000619554 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
NBPF3-213ENST00000619554 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
NBPF3-213ENST00000619554 GLI2P10070 1586 aa16.1■□□□□ 0.17
NBPF3-213ENST00000619554 CFDP1Q9UEE9 299 aaPredicted RBP16.08■□□□□ 0.16
NBPF3-213ENST00000619554 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
NBPF3-213ENST00000619554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.07■□□□□ 0.16
NBPF3-213ENST00000619554 EFCAB2Q5VUJ9 269 aa16.07■□□□□ 0.16
NBPF3-213ENST00000619554 PLCH2O75038 1416 aa16.05■□□□□ 0.16
NBPF3-213ENST00000619554 ZNF777Q9ULD5 760 aaPredicted RBP16.05■□□□□ 0.16
NBPF3-213ENST00000619554 TEX14Q8IWB6 1497 aa16.04■□□□□ 0.16
NBPF3-213ENST00000619554 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
NBPF3-213ENST00000619554 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
NBPF3-213ENST00000619554 TTC37Q6PGP7 1564 aa16.02■□□□□ 0.15
NBPF3-213ENST00000619554 GPATCH8Q9UKJ3 1502 aaKnown RBP16.02■□□□□ 0.15
NBPF3-213ENST00000619554 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
NBPF3-213ENST00000619554 ARHGAP5Q13017 1502 aa16■□□□□ 0.15
NBPF3-213ENST00000619554 FANCAO15360 1455 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms