RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 NUP160Q12769 1436 aa10.7□□□□□ -0.7
CBWD3-215ENST00000619322 SYNJ2O15056 1496 aa10.7□□□□□ -0.7
CBWD3-215ENST00000619322 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
CBWD3-215ENST00000619322 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
CBWD3-215ENST00000619322 MAPKBP1O60336 1514 aa10.69□□□□□ -0.7
CBWD3-215ENST00000619322 RUSC2Q8N2Y8 1516 aa10.69□□□□□ -0.7
CBWD3-215ENST00000619322 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
CBWD3-215ENST00000619322 GLI2P10070 1586 aa10.68□□□□□ -0.7
CBWD3-215ENST00000619322 KIF13AQ9H1H9 1805 aa10.64□□□□□ -0.71
CBWD3-215ENST00000619322 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
CBWD3-215ENST00000619322 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
CBWD3-215ENST00000619322 UHRF1BP1LA0JNW5 1464 aa10.57□□□□□ -0.72
CBWD3-215ENST00000619322 FGD5Q6ZNL6 1462 aa10.57□□□□□ -0.72
CBWD3-215ENST00000619322 ARAP1Q96P48 1450 aa10.57□□□□□ -0.72
CBWD3-215ENST00000619322 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
CBWD3-215ENST00000619322 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
CBWD3-215ENST00000619322 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
CBWD3-215ENST00000619322 CTTNBP2Q8WZ74 1663 aa10.54□□□□□ -0.72
CBWD3-215ENST00000619322 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-215ENST00000619322 GRIN2AQ12879 1464 aa10.52□□□□□ -0.73
CBWD3-215ENST00000619322 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
CBWD3-215ENST00000619322 MAP3K4Q9Y6R4 1608 aa10.49□□□□□ -0.73
CBWD3-215ENST00000619322 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
CBWD3-215ENST00000619322 PPRC1Q5VV67 1664 aaKnown RBP10.49□□□□□ -0.73
CBWD3-215ENST00000619322 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
CBWD3-215ENST00000619322 UGGT2Q9NYU1 1516 aa10.47□□□□□ -0.73
CBWD3-215ENST00000619322 MYCNP04198 464 aaPredicted RBP10.46□□□□□ -0.73
CBWD3-215ENST00000619322 GAPVD1Q14C86 1478 aa10.46□□□□□ -0.73
CBWD3-215ENST00000619322 KDM5BQ9UGL1 1544 aa10.45□□□□□ -0.74
CBWD3-215ENST00000619322 DIP2BQ9P265 1576 aa10.45□□□□□ -0.74
CBWD3-215ENST00000619322 CFAP43Q8NDM7 1665 aa10.44□□□□□ -0.74
CBWD3-215ENST00000619322 SOGA1O94964 1423 aa10.41□□□□□ -0.74
CBWD3-215ENST00000619322 ADCY10Q96PN6 1610 aa10.4□□□□□ -0.74
CBWD3-215ENST00000619322 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
CBWD3-215ENST00000619322 OSCARQ8IYS5 282 aa10.38□□□□□ -0.75
CBWD3-215ENST00000619322 SAMD9Q5K651 1589 aa10.37□□□□□ -0.75
CBWD3-215ENST00000619322 CFAP74Q9C0B2 1584 aa10.34□□□□□ -0.75
CBWD3-215ENST00000619322 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
CBWD3-215ENST00000619322 ARAP3Q8WWN8 1544 aa10.33□□□□□ -0.76
CBWD3-215ENST00000619322 ABCC10Q5T3U5 1492 aa10.31□□□□□ -0.76
CBWD3-215ENST00000619322 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
CBWD3-215ENST00000619322 KIAA0556O60303 1618 aa10.3□□□□□ -0.76
CBWD3-215ENST00000619322 ABCA8O94911 1581 aa10.3□□□□□ -0.76
CBWD3-215ENST00000619322 CAPN15O75808 1086 aa10.3□□□□□ -0.76
CBWD3-215ENST00000619322 ABCB7O75027 752 aa10.3□□□□□ -0.76
CBWD3-215ENST00000619322 C1QBPQ07021 282 aaKnown RBP10.29□□□□□ -0.76
CBWD3-215ENST00000619322 REREQ9P2R6 1566 aa10.29□□□□□ -0.76
CBWD3-215ENST00000619322 CACNB1Q02641 598 aaPredicted RBP10.29□□□□□ -0.76
CBWD3-215ENST00000619322 RAD54L2Q9Y4B4 1467 aa10.28□□□□□ -0.76
CBWD3-215ENST00000619322 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
CBWD3-215ENST00000619322 ABCA9Q8IUA7 1624 aa10.26□□□□□ -0.77
CBWD3-215ENST00000619322 AQRO60306 1485 aaKnown RBP eCLIP10.26□□□□□ -0.77
CBWD3-215ENST00000619322 KIF21BO75037 1637 aa10.25□□□□□ -0.77
CBWD3-215ENST00000619322 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
CBWD3-215ENST00000619322 ZCCHC11Q5TAX3 1644 aaKnown RBP10.24□□□□□ -0.77
CBWD3-215ENST00000619322 BCORL1Q5H9F3 1711 aa10.23□□□□□ -0.77
CBWD3-215ENST00000619322 FAM135AQ9P2D6 1515 aa10.23□□□□□ -0.77
CBWD3-215ENST00000619322 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
CBWD3-215ENST00000619322 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-215ENST00000619322 EFCAB5A4FU69 1503 aa10.21□□□□□ -0.77
CBWD3-215ENST00000619322 PHLDB1Q86UU1 1377 aa10.21□□□□□ -0.78
CBWD3-215ENST00000619322 EEA1Q15075 1411 aa10.19□□□□□ -0.78
CBWD3-215ENST00000619322 PLB1Q6P1J6 1458 aa10.19□□□□□ -0.78
CBWD3-215ENST00000619322 ERCC6L2Q5T890 1561 aa10.18□□□□□ -0.78
CBWD3-215ENST00000619322 DISP1Q96F81 1524 aa10.18□□□□□ -0.78
CBWD3-215ENST00000619322 GOLGA3Q08378 1498 aa10.18□□□□□ -0.78
CBWD3-215ENST00000619322 POLA2Q14181 598 aa10.16□□□□□ -0.78
CBWD3-215ENST00000619322 DSG3P32926 999 aa10.16□□□□□ -0.78
CBWD3-215ENST00000619322 PRXQ9BXM0 1461 aa10.15□□□□□ -0.78
CBWD3-215ENST00000619322 KIF27Q86VH2 1401 aa10.15□□□□□ -0.78
CBWD3-215ENST00000619322 ADAMTSL3P82987 1691 aa10.14□□□□□ -0.79
CBWD3-215ENST00000619322 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
CBWD3-215ENST00000619322 TEX14Q8IWB6 1497 aa10.14□□□□□ -0.79
CBWD3-215ENST00000619322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
CBWD3-215ENST00000619322 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
CBWD3-215ENST00000619322 MROH2AA6NES4 1674 aa10.12□□□□□ -0.79
CBWD3-215ENST00000619322 RICTORQ6R327 1708 aa10.11□□□□□ -0.79
CBWD3-215ENST00000619322 KDM6BO15054 1643 aa10.1□□□□□ -0.79
CBWD3-215ENST00000619322 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
CBWD3-215ENST00000619322 RAPGEF2Q9Y4G8 1499 aa10.08□□□□□ -0.8
CBWD3-215ENST00000619322 FRMPD1Q5SYB0 1578 aa10.08□□□□□ -0.8
CBWD3-215ENST00000619322 MKRN4PQ13434 485 aaPredicted RBP10.07□□□□□ -0.8
CBWD3-215ENST00000619322 NEO1Q92859 1461 aa10.06□□□□□ -0.8
CBWD3-215ENST00000619322 IGF1RP08069 1367 aa10.06□□□□□ -0.8
CBWD3-215ENST00000619322 RAPGEF6Q8TEU7 1601 aa10.06□□□□□ -0.8
CBWD3-215ENST00000619322 EPRSP07814 1512 aaKnown RBP10.06□□□□□ -0.8
CBWD3-215ENST00000619322 ARHGEF40Q8TER5 1519 aa10.05□□□□□ -0.8
CBWD3-215ENST00000619322 TNIKQ9UKE5 1360 aa10.04□□□□□ -0.8
CBWD3-215ENST00000619322 WDR7Q9Y4E6 1490 aa10.03□□□□□ -0.8
CBWD3-215ENST00000619322 CARMIL2Q6F5E8 1435 aa10.02□□□□□ -0.81
CBWD3-215ENST00000619322 MAGI2Q86UL8 1455 aa10.02□□□□□ -0.81
CBWD3-215ENST00000619322 ZNF142P52746 1687 aaPredicted RBP10.01□□□□□ -0.81
CBWD3-215ENST00000619322 TTC37Q6PGP7 1564 aa10.01□□□□□ -0.81
CBWD3-215ENST00000619322 KDM5CP41229 1560 aa10.01□□□□□ -0.81
CBWD3-215ENST00000619322 PRG4Q92954 1404 aaPredicted RBP10□□□□□ -0.81
CBWD3-215ENST00000619322 IQSEC2Q5JU85 1478 aa9.99□□□□□ -0.81
CBWD3-215ENST00000619322 TDRD9Q8NDG6 1382 aaKnown RBP9.99□□□□□ -0.81
CBWD3-215ENST00000619322 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
CBWD3-215ENST00000619322 KDM5AP29375 1690 aaKnown RBP9.97□□□□□ -0.81
CBWD3-215ENST00000619322 FER1L4A9Z1Z3 1794 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms