RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 NUP160Q12769 1436 aa17.79■□□□□ 0.44
SNORD3D-201ENST00000619178 KIAA0586Q9BVV6 1533 aa17.78■□□□□ 0.44
SNORD3D-201ENST00000619178 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
SNORD3D-201ENST00000619178 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
SNORD3D-201ENST00000619178 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
SNORD3D-201ENST00000619178 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.43
SNORD3D-201ENST00000619178 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
SNORD3D-201ENST00000619178 SHROOM2Q13796 1616 aa17.7■□□□□ 0.42
SNORD3D-201ENST00000619178 UGGT2Q9NYU1 1516 aa17.68■□□□□ 0.42
SNORD3D-201ENST00000619178 SAMD9Q5K651 1589 aa17.66■□□□□ 0.42
SNORD3D-201ENST00000619178 CEP162Q5TB80 1403 aa17.64■□□□□ 0.42
SNORD3D-201ENST00000619178 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.42
SNORD3D-201ENST00000619178 CLIP1P30622 1438 aa17.63■□□□□ 0.41
SNORD3D-201ENST00000619178 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
SNORD3D-201ENST00000619178 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
SNORD3D-201ENST00000619178 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
SNORD3D-201ENST00000619178 RANGAP1P46060 587 aaPredicted RBP17.54■□□□□ 0.4
SNORD3D-201ENST00000619178 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
SNORD3D-201ENST00000619178 DISP1Q96F81 1524 aa17.52■□□□□ 0.4
SNORD3D-201ENST00000619178 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
SNORD3D-201ENST00000619178 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
SNORD3D-201ENST00000619178 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
SNORD3D-201ENST00000619178 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
SNORD3D-201ENST00000619178 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
SNORD3D-201ENST00000619178 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
SNORD3D-201ENST00000619178 HECW1Q76N89 1606 aa17.43■□□□□ 0.38
SNORD3D-201ENST00000619178 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
SNORD3D-201ENST00000619178 ARHGEF11O15085 1522 aa17.43■□□□□ 0.38
SNORD3D-201ENST00000619178 VPS8Q8N3P4 1428 aa17.43■□□□□ 0.38
SNORD3D-201ENST00000619178 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
SNORD3D-201ENST00000619178 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
SNORD3D-201ENST00000619178 PTPRGP23470 1445 aa17.41■□□□□ 0.38
SNORD3D-201ENST00000619178 FYCO1Q9BQS8 1478 aa17.4■□□□□ 0.38
SNORD3D-201ENST00000619178 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.37
SNORD3D-201ENST00000619178 CASKIN1Q8WXD9 1431 aa17.36■□□□□ 0.37
SNORD3D-201ENST00000619178 ABCA8O94911 1581 aa17.36■□□□□ 0.37
SNORD3D-201ENST00000619178 APLP2Q06481 763 aa17.35■□□□□ 0.37
SNORD3D-201ENST00000619178 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
SNORD3D-201ENST00000619178 CCDC18Q5T9S5 1454 aa17.34■□□□□ 0.37
SNORD3D-201ENST00000619178 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.37
SNORD3D-201ENST00000619178 ABCC2Q92887 1545 aa17.32■□□□□ 0.36
SNORD3D-201ENST00000619178 UACAQ9BZF9 1416 aa17.32■□□□□ 0.36
SNORD3D-201ENST00000619178 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
SNORD3D-201ENST00000619178 UHRF1BP1LA0JNW5 1464 aa17.31■□□□□ 0.36
SNORD3D-201ENST00000619178 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
SNORD3D-201ENST00000619178 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
SNORD3D-201ENST00000619178 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
SNORD3D-201ENST00000619178 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.36
SNORD3D-201ENST00000619178 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
SNORD3D-201ENST00000619178 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
SNORD3D-201ENST00000619178 EPRSP07814 1512 aaKnown RBP17.24■□□□□ 0.35
SNORD3D-201ENST00000619178 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
SNORD3D-201ENST00000619178 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
SNORD3D-201ENST00000619178 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNORD3D-201ENST00000619178 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.34
SNORD3D-201ENST00000619178 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
SNORD3D-201ENST00000619178 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
SNORD3D-201ENST00000619178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
SNORD3D-201ENST00000619178 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
SNORD3D-201ENST00000619178 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
SNORD3D-201ENST00000619178 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
SNORD3D-201ENST00000619178 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
SNORD3D-201ENST00000619178 ATP10BO94823 1461 aa17.15■□□□□ 0.34
SNORD3D-201ENST00000619178 KIF14Q15058 1648 aa17.14■□□□□ 0.33
SNORD3D-201ENST00000619178 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
SNORD3D-201ENST00000619178 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
SNORD3D-201ENST00000619178 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
SNORD3D-201ENST00000619178 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
SNORD3D-201ENST00000619178 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
SNORD3D-201ENST00000619178 TROQ12816 1431 aaPredicted RBP17.08■□□□□ 0.32
SNORD3D-201ENST00000619178 MYO5CQ9NQX4 1742 aa17.07■□□□□ 0.32
SNORD3D-201ENST00000619178 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
SNORD3D-201ENST00000619178 ARID3CA6NKF2 412 aa17.06■□□□□ 0.32
SNORD3D-201ENST00000619178 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
SNORD3D-201ENST00000619178 MAGI3Q5TCQ9 1506 aa17.02■□□□□ 0.32
SNORD3D-201ENST00000619178 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.32
SNORD3D-201ENST00000619178 ABCA9Q8IUA7 1624 aa17■□□□□ 0.31
SNORD3D-201ENST00000619178 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
SNORD3D-201ENST00000619178 PREX2Q70Z35 1606 aa16.98■□□□□ 0.31
SNORD3D-201ENST00000619178 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
SNORD3D-201ENST00000619178 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
SNORD3D-201ENST00000619178 GLI2P10070 1586 aa16.97■□□□□ 0.31
SNORD3D-201ENST00000619178 CFAP74Q9C0B2 1584 aa16.97■□□□□ 0.31
SNORD3D-201ENST00000619178 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.3
SNORD3D-201ENST00000619178 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
SNORD3D-201ENST00000619178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNORD3D-201ENST00000619178 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
SNORD3D-201ENST00000619178 CCNB3Q8WWL7 1395 aa16.94■□□□□ 0.3
SNORD3D-201ENST00000619178 MAP3K4Q9Y6R4 1608 aa16.93■□□□□ 0.3
SNORD3D-201ENST00000619178 ARAP3Q8WWN8 1544 aa16.93■□□□□ 0.3
SNORD3D-201ENST00000619178 KCNH8Q96L42 1107 aa16.93■□□□□ 0.3
SNORD3D-201ENST00000619178 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
SNORD3D-201ENST00000619178 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
SNORD3D-201ENST00000619178 ABCC10Q5T3U5 1492 aa16.91■□□□□ 0.3
SNORD3D-201ENST00000619178 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
SNORD3D-201ENST00000619178 MIA2Q96PC5 1412 aa16.89■□□□□ 0.29
SNORD3D-201ENST00000619178 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
SNORD3D-201ENST00000619178 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
SNORD3D-201ENST00000619178 GPATCH8Q9UKJ3 1502 aaKnown RBP16.85■□□□□ 0.29
SNORD3D-201ENST00000619178 PLCH2O75038 1416 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms