RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
TNFAIP3-209ENST00000619035 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
TNFAIP3-209ENST00000619035 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
TNFAIP3-209ENST00000619035 ARHGAP35Q9NRY4 1499 aa19.76■□□□□ 0.75
TNFAIP3-209ENST00000619035 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
TNFAIP3-209ENST00000619035 APLP2Q06481 763 aa19.69■□□□□ 0.74
TNFAIP3-209ENST00000619035 EFCAB5A4FU69 1503 aa19.69■□□□□ 0.74
TNFAIP3-209ENST00000619035 SNAPC4Q5SXM2 1469 aa19.69■□□□□ 0.74
TNFAIP3-209ENST00000619035 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
TNFAIP3-209ENST00000619035 SYNJ2O15056 1496 aa19.63■□□□□ 0.73
TNFAIP3-209ENST00000619035 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
TNFAIP3-209ENST00000619035 FHOD3Q2V2M9 1422 aa19.59■□□□□ 0.73
TNFAIP3-209ENST00000619035 IQGAP2Q13576 1575 aa19.58■□□□□ 0.72
TNFAIP3-209ENST00000619035 SAMD9Q5K651 1589 aa19.58■□□□□ 0.72
TNFAIP3-209ENST00000619035 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
TNFAIP3-209ENST00000619035 FBLN2P98095 1184 aa19.55■□□□□ 0.72
TNFAIP3-209ENST00000619035 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
TNFAIP3-209ENST00000619035 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
TNFAIP3-209ENST00000619035 MAP3K1Q13233 1512 aa19.5■□□□□ 0.71
TNFAIP3-209ENST00000619035 FMN1Q68DA7 1419 aa19.5■□□□□ 0.71
TNFAIP3-209ENST00000619035 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
TNFAIP3-209ENST00000619035 NUP160Q12769 1436 aa19.5■□□□□ 0.71
TNFAIP3-209ENST00000619035 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
TNFAIP3-209ENST00000619035 PCF11O94913 1555 aaKnown RBP19.49■□□□□ 0.71
TNFAIP3-209ENST00000619035 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
TNFAIP3-209ENST00000619035 FYCO1Q9BQS8 1478 aa19.45■□□□□ 0.7
TNFAIP3-209ENST00000619035 CASKIN1Q8WXD9 1431 aa19.44■□□□□ 0.7
TNFAIP3-209ENST00000619035 TIAM1Q13009 1591 aa19.41■□□□□ 0.7
TNFAIP3-209ENST00000619035 KIAA0556O60303 1618 aa19.37■□□□□ 0.69
TNFAIP3-209ENST00000619035 CHD1O14646 1710 aa19.37■□□□□ 0.69
TNFAIP3-209ENST00000619035 DISP1Q96F81 1524 aa19.36■□□□□ 0.69
TNFAIP3-209ENST00000619035 CFAP43Q8NDM7 1665 aa19.36■□□□□ 0.69
TNFAIP3-209ENST00000619035 LRRC9Q6ZRR7 1453 aa19.33■□□□□ 0.68
TNFAIP3-209ENST00000619035 CARMIL2Q6F5E8 1435 aa19.33■□□□□ 0.68
TNFAIP3-209ENST00000619035 JPH4Q96JJ6 628 aa19.32■□□□□ 0.68
TNFAIP3-209ENST00000619035 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
TNFAIP3-209ENST00000619035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
TNFAIP3-209ENST00000619035 HECW1Q76N89 1606 aa19.27■□□□□ 0.68
TNFAIP3-209ENST00000619035 CCDC18Q5T9S5 1454 aa19.27■□□□□ 0.68
TNFAIP3-209ENST00000619035 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
TNFAIP3-209ENST00000619035 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
TNFAIP3-209ENST00000619035 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
TNFAIP3-209ENST00000619035 MTUS2Q5JR59 1369 aa19.22■□□□□ 0.67
TNFAIP3-209ENST00000619035 RRBP1Q9P2E9 1410 aaKnown RBP19.21■□□□□ 0.67
TNFAIP3-209ENST00000619035 PHLDB1Q86UU1 1377 aa19.2■□□□□ 0.66
TNFAIP3-209ENST00000619035 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
TNFAIP3-209ENST00000619035 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
TNFAIP3-209ENST00000619035 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
TNFAIP3-209ENST00000619035 CLASP1Q7Z460 1538 aa19.18■□□□□ 0.66
TNFAIP3-209ENST00000619035 PRG4Q92954 1404 aaPredicted RBP19.18■□□□□ 0.66
TNFAIP3-209ENST00000619035 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
TNFAIP3-209ENST00000619035 CDK13Q14004 1512 aaKnown RBP19.16■□□□□ 0.66
TNFAIP3-209ENST00000619035 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
TNFAIP3-209ENST00000619035 EHBP1L1Q8N3D4 1523 aa19.15■□□□□ 0.66
TNFAIP3-209ENST00000619035 ITGAEP38570 1179 aa19.13■□□□□ 0.65
TNFAIP3-209ENST00000619035 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
TNFAIP3-209ENST00000619035 PLB1Q6P1J6 1458 aa19.12■□□□□ 0.65
TNFAIP3-209ENST00000619035 MAGI3Q5TCQ9 1506 aa19.12■□□□□ 0.65
TNFAIP3-209ENST00000619035 ABCA8O94911 1581 aa19.1■□□□□ 0.65
TNFAIP3-209ENST00000619035 SUPT6HQ7KZ85 1726 aaKnown RBP19.1■□□□□ 0.65
TNFAIP3-209ENST00000619035 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
TNFAIP3-209ENST00000619035 PTPRGP23470 1445 aa19.09■□□□□ 0.65
TNFAIP3-209ENST00000619035 NCOA2Q15596 1464 aa19.08■□□□□ 0.65
TNFAIP3-209ENST00000619035 CDK11AQ9UQ88 783 aaPredicted RBP19.07■□□□□ 0.64
TNFAIP3-209ENST00000619035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
TNFAIP3-209ENST00000619035 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
TNFAIP3-209ENST00000619035 FGD6Q6ZV73 1430 aa19.02■□□□□ 0.64
TNFAIP3-209ENST00000619035 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
TNFAIP3-209ENST00000619035 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
TNFAIP3-209ENST00000619035 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
TNFAIP3-209ENST00000619035 UACAQ9BZF9 1416 aa18.99■□□□□ 0.63
TNFAIP3-209ENST00000619035 TROQ12816 1431 aaPredicted RBP18.96■□□□□ 0.63
TNFAIP3-209ENST00000619035 ATP10BO94823 1461 aa18.95■□□□□ 0.62
TNFAIP3-209ENST00000619035 ADCY10Q96PN6 1610 aa18.94■□□□□ 0.62
TNFAIP3-209ENST00000619035 ABCC2Q92887 1545 aa18.93■□□□□ 0.62
TNFAIP3-209ENST00000619035 MIA2Q96PC5 1412 aa18.93■□□□□ 0.62
TNFAIP3-209ENST00000619035 UHRF1BP1LA0JNW5 1464 aa18.93■□□□□ 0.62
TNFAIP3-209ENST00000619035 PTPN23Q9H3S7 1636 aa18.91■□□□□ 0.62
TNFAIP3-209ENST00000619035 PLEKHD1A6NEE1 506 aa18.9■□□□□ 0.62
TNFAIP3-209ENST00000619035 TCOF1Q13428 1488 aaKnown RBP18.89■□□□□ 0.61
TNFAIP3-209ENST00000619035 KIF14Q15058 1648 aa18.86■□□□□ 0.61
TNFAIP3-209ENST00000619035 RAB3GAP2Q9H2M9 1393 aa18.85■□□□□ 0.61
TNFAIP3-209ENST00000619035 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
TNFAIP3-209ENST00000619035 SETD5Q9C0A6 1442 aa18.84■□□□□ 0.61
TNFAIP3-209ENST00000619035 KDM5BQ9UGL1 1544 aa18.83■□□□□ 0.61
TNFAIP3-209ENST00000619035 PTPRKQ15262 1439 aa18.82■□□□□ 0.6
TNFAIP3-209ENST00000619035 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
TNFAIP3-209ENST00000619035 ABCC10Q5T3U5 1492 aa18.79■□□□□ 0.6
TNFAIP3-209ENST00000619035 ZNF644Q9H582 1327 aaPredicted RBP18.78■□□□□ 0.6
TNFAIP3-209ENST00000619035 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
TNFAIP3-209ENST00000619035 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
TNFAIP3-209ENST00000619035 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
TNFAIP3-209ENST00000619035 CHIC2Q9UKJ5 165 aa18.77■□□□□ 0.6
TNFAIP3-209ENST00000619035 ZNF777Q9ULD5 760 aaPredicted RBP18.76■□□□□ 0.59
TNFAIP3-209ENST00000619035 CDC42BPAQ5VT25 1732 aa18.74■□□□□ 0.59
TNFAIP3-209ENST00000619035 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
TNFAIP3-209ENST00000619035 HFM1A2PYH4 1435 aa18.73■□□□□ 0.59
TNFAIP3-209ENST00000619035 CAMSAP2Q08AD1 1489 aa18.72■□□□□ 0.59
TNFAIP3-209ENST00000619035 AKNAQ7Z591 1439 aa18.71■□□□□ 0.59
TNFAIP3-209ENST00000619035 RRP7BPQ9NSQ0 103 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms