RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 JPH4Q96JJ6 628 aa22.64■■□□□ 1.21
PDCD6-213ENST00000618970 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
PDCD6-213ENST00000618970 CUL7Q14999 1698 aa22.59■■□□□ 1.21
PDCD6-213ENST00000618970 IGF1RP08069 1367 aa22.59■■□□□ 1.21
PDCD6-213ENST00000618970 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
PDCD6-213ENST00000618970 KIAA0586Q9BVV6 1533 aa22.53■■□□□ 1.2
PDCD6-213ENST00000618970 ADCY10Q96PN6 1610 aa22.51■■□□□ 1.19
PDCD6-213ENST00000618970 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
PDCD6-213ENST00000618970 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
PDCD6-213ENST00000618970 ABCC10Q5T3U5 1492 aa22.42■■□□□ 1.18
PDCD6-213ENST00000618970 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
PDCD6-213ENST00000618970 EEA1Q15075 1411 aa22.38■■□□□ 1.17
PDCD6-213ENST00000618970 NPM1P06748 294 aaKnown RBP eCLIP22.37■■□□□ 1.17
PDCD6-213ENST00000618970 FAM69CQ0P6D2 419 aa22.36■■□□□ 1.17
PDCD6-213ENST00000618970 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
PDCD6-213ENST00000618970 IQGAP2Q13576 1575 aa22.34■■□□□ 1.17
PDCD6-213ENST00000618970 PRXQ9BXM0 1461 aa22.33■■□□□ 1.16
PDCD6-213ENST00000618970 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
PDCD6-213ENST00000618970 PTPRGP23470 1445 aa22.31■■□□□ 1.16
PDCD6-213ENST00000618970 CARMIL2Q6F5E8 1435 aa22.28■■□□□ 1.16
PDCD6-213ENST00000618970 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
PDCD6-213ENST00000618970 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
PDCD6-213ENST00000618970 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.16
PDCD6-213ENST00000618970 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
PDCD6-213ENST00000618970 DISP1Q96F81 1524 aa22.25■■□□□ 1.15
PDCD6-213ENST00000618970 ABCC2Q92887 1545 aa22.24■■□□□ 1.15
PDCD6-213ENST00000618970 KDM6BO15054 1643 aa22.2■■□□□ 1.15
PDCD6-213ENST00000618970 KIF21BO75037 1637 aa22.2■■□□□ 1.14
PDCD6-213ENST00000618970 UGGT2Q9NYU1 1516 aa22.19■■□□□ 1.14
PDCD6-213ENST00000618970 UHRF1BP1LA0JNW5 1464 aa22.18■■□□□ 1.14
PDCD6-213ENST00000618970 ASXL2Q76L83 1435 aa22.16■■□□□ 1.14
PDCD6-213ENST00000618970 KIAA0556O60303 1618 aa22.16■■□□□ 1.14
PDCD6-213ENST00000618970 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
PDCD6-213ENST00000618970 PPRC1Q5VV67 1664 aaKnown RBP22.13■■□□□ 1.13
PDCD6-213ENST00000618970 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
PDCD6-213ENST00000618970 PLB1Q6P1J6 1458 aa22.12■■□□□ 1.13
PDCD6-213ENST00000618970 GLI2P10070 1586 aa22.12■■□□□ 1.13
PDCD6-213ENST00000618970 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
PDCD6-213ENST00000618970 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
PDCD6-213ENST00000618970 EPRSP07814 1512 aaKnown RBP22.04■■□□□ 1.12
PDCD6-213ENST00000618970 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
PDCD6-213ENST00000618970 MAP3K4Q9Y6R4 1608 aa22.02■■□□□ 1.12
PDCD6-213ENST00000618970 KDM4FA0A1W2PPD8 638 aa21.98■■□□□ 1.11
PDCD6-213ENST00000618970 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
PDCD6-213ENST00000618970 ABCA8O94911 1581 aa21.95■■□□□ 1.11
PDCD6-213ENST00000618970 WDR7Q9Y4E6 1490 aa21.95■■□□□ 1.1
PDCD6-213ENST00000618970 COL17A1Q9UMD9 1497 aaPredicted RBP21.94■■□□□ 1.1
PDCD6-213ENST00000618970 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
PDCD6-213ENST00000618970 TEX14Q8IWB6 1497 aa21.9■■□□□ 1.1
PDCD6-213ENST00000618970 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
PDCD6-213ENST00000618970 SENP3Q9H4L4 574 aaPredicted RBP21.88■■□□□ 1.09
PDCD6-213ENST00000618970 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
PDCD6-213ENST00000618970 CFAP43Q8NDM7 1665 aa21.84■■□□□ 1.09
PDCD6-213ENST00000618970 ADGRL1O94910 1474 aa21.82■■□□□ 1.08
PDCD6-213ENST00000618970 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
PDCD6-213ENST00000618970 CD109Q6YHK3 1445 aa21.79■■□□□ 1.08
PDCD6-213ENST00000618970 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
PDCD6-213ENST00000618970 KCNH8Q96L42 1107 aa21.78■■□□□ 1.08
PDCD6-213ENST00000618970 ARID3CA6NKF2 412 aa21.75■■□□□ 1.07
PDCD6-213ENST00000618970 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
PDCD6-213ENST00000618970 ATP10BO94823 1461 aa21.74■■□□□ 1.07
PDCD6-213ENST00000618970 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
PDCD6-213ENST00000618970 EFCAB5A4FU69 1503 aa21.73■■□□□ 1.07
PDCD6-213ENST00000618970 RAPGEF6Q8TEU7 1601 aa21.7■■□□□ 1.06
PDCD6-213ENST00000618970 FHOD3Q2V2M9 1422 aa21.67■■□□□ 1.06
PDCD6-213ENST00000618970 ABCA9Q8IUA7 1624 aa21.66■■□□□ 1.06
PDCD6-213ENST00000618970 CLIP1P30622 1438 aa21.64■■□□□ 1.06
PDCD6-213ENST00000618970 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
PDCD6-213ENST00000618970 NUP153P49790 1475 aaKnown RBP21.63■■□□□ 1.05
PDCD6-213ENST00000618970 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
PDCD6-213ENST00000618970 PHF23Q9BUL5 403 aaPredicted RBP21.6■■□□□ 1.05
PDCD6-213ENST00000618970 HECW2Q9P2P5 1572 aa21.56■■□□□ 1.04
PDCD6-213ENST00000618970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
PDCD6-213ENST00000618970 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
PDCD6-213ENST00000618970 FRMPD1Q5SYB0 1578 aa21.52■■□□□ 1.04
PDCD6-213ENST00000618970 NEO1Q92859 1461 aa21.52■■□□□ 1.03
PDCD6-213ENST00000618970 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
PDCD6-213ENST00000618970 FMN1Q68DA7 1419 aa21.5■■□□□ 1.03
PDCD6-213ENST00000618970 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
PDCD6-213ENST00000618970 LRRIQ1Q96JM4 1722 aa21.47■■□□□ 1.03
PDCD6-213ENST00000618970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.44■■□□□ 1.022e-6■■■■■ 26.8
PDCD6-213ENST00000618970 TTC37Q6PGP7 1564 aa21.44■■□□□ 1.02
PDCD6-213ENST00000618970 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
PDCD6-213ENST00000618970 PCF11O94913 1555 aaKnown RBP21.43■■□□□ 1.02
PDCD6-213ENST00000618970 ADAMTSL3P82987 1691 aa21.43■■□□□ 1.02
PDCD6-213ENST00000618970 CASKIN1Q8WXD9 1431 aa21.42■■□□□ 1.02
PDCD6-213ENST00000618970 RICTORQ6R327 1708 aa21.41■■□□□ 1.02
PDCD6-213ENST00000618970 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
PDCD6-213ENST00000618970 HECW1Q76N89 1606 aa21.39■■□□□ 1.01
PDCD6-213ENST00000618970 CFAP74Q9C0B2 1584 aa21.39■■□□□ 1.01
PDCD6-213ENST00000618970 ARHGEF40Q8TER5 1519 aa21.39■■□□□ 1.01
PDCD6-213ENST00000618970 FANCAO15360 1455 aa21.39■■□□□ 1.01
PDCD6-213ENST00000618970 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
PDCD6-213ENST00000618970 AKNAQ7Z591 1439 aa21.37■■□□□ 1.01
PDCD6-213ENST00000618970 DENND4BO75064 1496 aaPredicted RBP21.36■■□□□ 1.01
PDCD6-213ENST00000618970 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
PDCD6-213ENST00000618970 PTPRMP28827 1452 aa21.35■■□□□ 1.01
PDCD6-213ENST00000618970 FYCO1Q9BQS8 1478 aa21.35■■□□□ 1.01
PDCD6-213ENST00000618970 MADDQ8WXG6 1647 aa21.34■■□□□ 1.01
PDCD6-213ENST00000618970 ILDR1Q86SU0 546 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms