RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.73
MALAT1-213ENST00000618227 UBTFP17480 764 aaKnown RBP25.73■■□□□ 1.71
MALAT1-213ENST00000618227 JPH4Q96JJ6 628 aa25.73■■□□□ 1.71
MALAT1-213ENST00000618227 IQGAP2Q13576 1575 aa25.71■■□□□ 1.71
MALAT1-213ENST00000618227 CTTNBP2Q8WZ74 1663 aa25.68■■□□□ 1.7
MALAT1-213ENST00000618227 TNIKQ9UKE5 1360 aa25.68■■□□□ 1.7
MALAT1-213ENST00000618227 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
MALAT1-213ENST00000618227 UGGT2Q9NYU1 1516 aa25.65■■□□□ 1.7
MALAT1-213ENST00000618227 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
MALAT1-213ENST00000618227 LOC105371045A0A1W2PR82 267 aa25.59■■□□□ 1.69
MALAT1-213ENST00000618227 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
MALAT1-213ENST00000618227 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
MALAT1-213ENST00000618227 CARMIL2Q6F5E8 1435 aa25.57■■□□□ 1.68
MALAT1-213ENST00000618227 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
MALAT1-213ENST00000618227 DISP1Q96F81 1524 aa25.51■■□□□ 1.67
MALAT1-213ENST00000618227 EFCAB5A4FU69 1503 aa25.48■■□□□ 1.67
MALAT1-213ENST00000618227 SAMD9Q5K651 1589 aa25.46■■□□□ 1.67
MALAT1-213ENST00000618227 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
MALAT1-213ENST00000618227 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
MALAT1-213ENST00000618227 RIMBP3CA6NJZ7 1639 aa25.41■■□□□ 1.66
MALAT1-213ENST00000618227 RIMBP3BA6NNM3 1639 aa25.41■■□□□ 1.66
MALAT1-213ENST00000618227 RIMBP3Q9UFD9 1639 aa25.41■■□□□ 1.66
MALAT1-213ENST00000618227 CLIP1P30622 1438 aa25.4■■□□□ 1.66
MALAT1-213ENST00000618227 ARHGAP35Q9NRY4 1499 aa25.39■■□□□ 1.65
MALAT1-213ENST00000618227 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
MALAT1-213ENST00000618227 PTPRGP23470 1445 aa25.37■■□□□ 1.65
MALAT1-213ENST00000618227 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
MALAT1-213ENST00000618227 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
MALAT1-213ENST00000618227 P3H3Q8IVL6 736 aa25.31■■□□□ 1.64
MALAT1-213ENST00000618227 FHOD3Q2V2M9 1422 aa25.28■■□□□ 1.64
MALAT1-213ENST00000618227 FMN1Q68DA7 1419 aa25.27■■□□□ 1.64
MALAT1-213ENST00000618227 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
MALAT1-213ENST00000618227 UACAQ9BZF9 1416 aa25.22■■□□□ 1.63
MALAT1-213ENST00000618227 UHRF1BP1LA0JNW5 1464 aa25.21■■□□□ 1.63
MALAT1-213ENST00000618227 ABCA8O94911 1581 aa25.17■■□□□ 1.62
MALAT1-213ENST00000618227 TTBK1Q5TCY1 1321 aaPredicted RBP25.15■■□□□ 1.62
MALAT1-213ENST00000618227 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
MALAT1-213ENST00000618227 ABCC2Q92887 1545 aa25.14■■□□□ 1.62
MALAT1-213ENST00000618227 CASKIN1Q8WXD9 1431 aa25.11■■□□□ 1.61
MALAT1-213ENST00000618227 VPS8Q8N3P4 1428 aa25.09■■□□□ 1.61
MALAT1-213ENST00000618227 RAPGEF6Q8TEU7 1601 aa25.08■■□□□ 1.61
MALAT1-213ENST00000618227 ADCY10Q96PN6 1610 aa25.08■■□□□ 1.6
MALAT1-213ENST00000618227 KDM5BQ9UGL1 1544 aa25.06■■□□□ 1.6
MALAT1-213ENST00000618227 FYCO1Q9BQS8 1478 aa25.05■■□□□ 1.6
MALAT1-213ENST00000618227 NPM1P06748 294 aaKnown RBP eCLIP25.05■■□□□ 1.6
MALAT1-213ENST00000618227 NUP153P49790 1475 aaKnown RBP25.03■■□□□ 1.6
MALAT1-213ENST00000618227 HECW1Q76N89 1606 aa25.01■■□□□ 1.59
MALAT1-213ENST00000618227 ATP10BO94823 1461 aa24.98■■□□□ 1.59
MALAT1-213ENST00000618227 PCF11O94913 1555 aaKnown RBP24.97■■□□□ 1.59
MALAT1-213ENST00000618227 CCDC18Q5T9S5 1454 aa24.96■■□□□ 1.59
MALAT1-213ENST00000618227 EPRSP07814 1512 aaKnown RBP24.95■■□□□ 1.58
MALAT1-213ENST00000618227 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
MALAT1-213ENST00000618227 MAPKBP1O60336 1514 aa24.91■■□□□ 1.58
MALAT1-213ENST00000618227 CDK11AQ9UQ88 783 aaPredicted RBP24.91■■□□□ 1.58
MALAT1-213ENST00000618227 ZCCHC11Q5TAX3 1644 aaKnown RBP24.9■■□□□ 1.58
MALAT1-213ENST00000618227 MAP3K1Q13233 1512 aa24.89■■□□□ 1.57
MALAT1-213ENST00000618227 PLEKHD1A6NEE1 506 aa24.86■■□□□ 1.57
MALAT1-213ENST00000618227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.85■■□□□ 1.57
MALAT1-213ENST00000618227 HNRNPUL2Q1KMD3 747 aaKnown RBP24.85■■□□□ 1.57
MALAT1-213ENST00000618227 ASXL2Q76L83 1435 aa24.85■■□□□ 1.57
MALAT1-213ENST00000618227 CDK13Q14004 1512 aaKnown RBP24.83■■□□□ 1.57
MALAT1-213ENST00000618227 ARID3CA6NKF2 412 aa24.82■■□□□ 1.56
MALAT1-213ENST00000618227 APLP2Q06481 763 aa24.82■■□□□ 1.56
MALAT1-213ENST00000618227 WDR7Q9Y4E6 1490 aa24.82■■□□□ 1.56
MALAT1-213ENST00000618227 LRRIQ1Q96JM4 1722 aa24.78■■□□□ 1.56
MALAT1-213ENST00000618227 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
MALAT1-213ENST00000618227 TROQ12816 1431 aaPredicted RBP24.76■■□□□ 1.55
MALAT1-213ENST00000618227 ABCC10Q5T3U5 1492 aa24.73■■□□□ 1.55
MALAT1-213ENST00000618227 CFAP43Q8NDM7 1665 aa24.72■■□□□ 1.55
MALAT1-213ENST00000618227 MTUS2Q5JR59 1369 aa24.71■■□□□ 1.55
MALAT1-213ENST00000618227 LRRC9Q6ZRR7 1453 aa24.69■■□□□ 1.54
MALAT1-213ENST00000618227 GLI2P10070 1586 aa24.68■■□□□ 1.54
MALAT1-213ENST00000618227 MAGI3Q5TCQ9 1506 aa24.67■■□□□ 1.54
MALAT1-213ENST00000618227 EHBP1L1Q8N3D4 1523 aa24.67■■□□□ 1.54
MALAT1-213ENST00000618227 KCNH8Q96L42 1107 aa24.66■■□□□ 1.54
MALAT1-213ENST00000618227 DIP2BQ9P265 1576 aa24.64■■□□□ 1.54
MALAT1-213ENST00000618227 FAM69CQ0P6D2 419 aa24.63■■□□□ 1.53
MALAT1-213ENST00000618227 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
MALAT1-213ENST00000618227 KIF14Q15058 1648 aa24.6■■□□□ 1.53
MALAT1-213ENST00000618227 ABCA9Q8IUA7 1624 aa24.58■■□□□ 1.53
MALAT1-213ENST00000618227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.57■■□□□ 1.52
MALAT1-213ENST00000618227 TRHP20396 242 aaPredicted RBP24.55■■□□□ 1.52
MALAT1-213ENST00000618227 CD109Q6YHK3 1445 aa24.54■■□□□ 1.52
MALAT1-213ENST00000618227 SUPT6HQ7KZ85 1726 aaKnown RBP24.52■■□□□ 1.52
MALAT1-213ENST00000618227 KIF13AQ9H1H9 1805 aa24.51■■□□□ 1.51
MALAT1-213ENST00000618227 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
MALAT1-213ENST00000618227 MAP3K4Q9Y6R4 1608 aa24.51■■□□□ 1.51
MALAT1-213ENST00000618227 PLCH2O75038 1416 aa24.51■■□□□ 1.51
MALAT1-213ENST00000618227 ARAP3Q8WWN8 1544 aa24.51■■□□□ 1.51
MALAT1-213ENST00000618227 CCNB3Q8WWL7 1395 aa24.49■■□□□ 1.51
MALAT1-213ENST00000618227 TTC37Q6PGP7 1564 aa24.48■■□□□ 1.51
MALAT1-213ENST00000618227 GPATCH8Q9UKJ3 1502 aaKnown RBP24.46■■□□□ 1.51
MALAT1-213ENST00000618227 PHLDB1Q86UU1 1377 aa24.46■■□□□ 1.51
MALAT1-213ENST00000618227 TEX14Q8IWB6 1497 aa24.44■■□□□ 1.5
MALAT1-213ENST00000618227 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
MALAT1-213ENST00000618227 NEO1Q92859 1461 aa24.4■■□□□ 1.5
MALAT1-213ENST00000618227 MYOM3Q5VTT5 1437 aa24.4■■□□□ 1.5
MALAT1-213ENST00000618227 MIA2Q96PC5 1412 aa24.4■■□□□ 1.5
MALAT1-213ENST00000618227 MYO5CQ9NQX4 1742 aa24.4■■□□□ 1.5
MALAT1-213ENST00000618227 CFDP1Q9UEE9 299 aaPredicted RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms