RNA–Protein interactions for RNA: ENST00000618220.4

SPPL2B-212, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best) BASIC

Gene SPPL2B, Length 2,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-212ENST00000618220 ERCC6Q03468 1493 aa30.89■■■□□ 2.54
SPPL2B-212ENST00000618220 ATP1B4Q9UN42 357 aaPredicted RBP30.85■■■□□ 2.53
SPPL2B-212ENST00000618220 FHOD3Q2V2M9 1422 aa30.84■■■□□ 2.53
SPPL2B-212ENST00000618220 ZNF608Q9ULD9 1512 aaPredicted RBP30.81■■■□□ 2.52
SPPL2B-212ENST00000618220 DIEXFQ68CQ4 756 aaKnown RBP30.81■■■□□ 2.52
SPPL2B-212ENST00000618220 WDR62O43379 1518 aa30.79■■■□□ 2.52
SPPL2B-212ENST00000618220 SCAF1Q9H7N4 1312 aaKnown RBP30.78■■■□□ 2.52
SPPL2B-212ENST00000618220 CTTNBP2Q8WZ74 1663 aa30.77■■■□□ 2.52
SPPL2B-212ENST00000618220 PBRM1Q86U86 1689 aa30.72■■■□□ 2.51
SPPL2B-212ENST00000618220 IFT140Q96RY7 1462 aa30.7■■■□□ 2.51
SPPL2B-212ENST00000618220 FHAD1B1AJZ9 1412 aa30.67■■■□□ 2.5
SPPL2B-212ENST00000618220 PCF11O94913 1555 aaKnown RBP30.66■■■□□ 2.5
SPPL2B-212ENST00000618220 GRIN2BQ13224 1484 aa30.65■■■□□ 2.5
SPPL2B-212ENST00000618220 EFCAB5A4FU69 1503 aa30.64■■■□□ 2.49
SPPL2B-212ENST00000618220 TIAM1Q13009 1591 aa30.63■■■□□ 2.49
SPPL2B-212ENST00000618220 THOC2Q8NI27 1593 aaKnown RBP30.61■■■□□ 2.49
SPPL2B-212ENST00000618220 ADAMTS12P58397 1594 aa30.59■■■□□ 2.49
SPPL2B-212ENST00000618220 ZNF316A6NFI3 1004 aaPredicted RBP30.57■■■□□ 2.48
SPPL2B-212ENST00000618220 ITGAEP38570 1179 aa30.55■■■□□ 2.48
SPPL2B-212ENST00000618220 LRRC9Q6ZRR7 1453 aa30.54■■■□□ 2.48
SPPL2B-212ENST00000618220 EIF4G3O43432 1585 aaKnown RBP30.52■■■□□ 2.48
SPPL2B-212ENST00000618220 SNAPC4Q5SXM2 1469 aa30.52■■■□□ 2.48
SPPL2B-212ENST00000618220 NEUROD1Q13562 356 aa30.51■■■□□ 2.48
SPPL2B-212ENST00000618220 CASKIN1Q8WXD9 1431 aa30.51■■■□□ 2.47
SPPL2B-212ENST00000618220 RRBP1Q9P2E9 1410 aaKnown RBP30.5■■■□□ 2.47
SPPL2B-212ENST00000618220 MAP3K1Q13233 1512 aa30.5■■■□□ 2.47
SPPL2B-212ENST00000618220 SAMD9Q5K651 1589 aa30.5■■■□□ 2.47
SPPL2B-212ENST00000618220 FMN1Q68DA7 1419 aa30.49■■■□□ 2.47
SPPL2B-212ENST00000618220 CCNB3Q8WWL7 1395 aa30.48■■■□□ 2.47
SPPL2B-212ENST00000618220 FYCO1Q9BQS8 1478 aa30.48■■■□□ 2.47
SPPL2B-212ENST00000618220 ACIN1Q9UKV3 1341 aaKnown RBP30.46■■■□□ 2.47
SPPL2B-212ENST00000618220 FBLN2P98095 1184 aa30.45■■■□□ 2.47
SPPL2B-212ENST00000618220 PHLDB1Q86UU1 1377 aa30.45■■■□□ 2.46
SPPL2B-212ENST00000618220 IQGAP2Q13576 1575 aa30.42■■■□□ 2.46
SPPL2B-212ENST00000618220 CFAP43Q8NDM7 1665 aa30.41■■■□□ 2.46
SPPL2B-212ENST00000618220 CHMP7Q8WUX9 453 aaPredicted RBP30.37■■■□□ 2.45
SPPL2B-212ENST00000618220 FAM50AQ14320 339 aaKnown RBP30.35■■■□□ 2.45
SPPL2B-212ENST00000618220 ARID3CA6NKF2 412 aa30.34■■■□□ 2.45
SPPL2B-212ENST00000618220 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
SPPL2B-212ENST00000618220 LRRIQ1Q96JM4 1722 aa30.29■■■□□ 2.44
SPPL2B-212ENST00000618220 MTUS2Q5JR59 1369 aa30.28■■■□□ 2.44
SPPL2B-212ENST00000618220 DHX57Q6P158 1386 aaKnown RBP30.26■■■□□ 2.43
SPPL2B-212ENST00000618220 KIAA0586Q9BVV6 1533 aa30.25■■■□□ 2.43
SPPL2B-212ENST00000618220 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
SPPL2B-212ENST00000618220 CENPBP07199 599 aaPredicted RBP30.23■■■□□ 2.43
SPPL2B-212ENST00000618220 YTHDC1Q96MU7 727 aaKnown RBP30.23■■■□□ 2.43
SPPL2B-212ENST00000618220 MIER1Q8N108 512 aa30.22■■■□□ 2.43
SPPL2B-212ENST00000618220 SYNJ2O15056 1496 aa30.21■■■□□ 2.43
SPPL2B-212ENST00000618220 UGGT2Q9NYU1 1516 aa30.2■■■□□ 2.43
SPPL2B-212ENST00000618220 GTF3C3Q9Y5Q9 886 aa30.17■■■□□ 2.42
SPPL2B-212ENST00000618220 DISP1Q96F81 1524 aa30.17■■■□□ 2.42
SPPL2B-212ENST00000618220 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
SPPL2B-212ENST00000618220 MAGI3Q5TCQ9 1506 aa30.11■■■□□ 2.41
SPPL2B-212ENST00000618220 KIAA0556O60303 1618 aa30.1■■■□□ 2.41
SPPL2B-212ENST00000618220 CDK13Q14004 1512 aaKnown RBP30.1■■■□□ 2.41
SPPL2B-212ENST00000618220 NCOA2Q15596 1464 aa30.08■■■□□ 2.41
SPPL2B-212ENST00000618220 RAB3GAP2Q9H2M9 1393 aa30.08■■■□□ 2.41
SPPL2B-212ENST00000618220 EPRSP07814 1512 aaKnown RBP30.07■■■□□ 2.4
SPPL2B-212ENST00000618220 FGD6Q6ZV73 1430 aa30.06■■■□□ 2.4
SPPL2B-212ENST00000618220 HECW1Q76N89 1606 aa30.06■■■□□ 2.4
SPPL2B-212ENST00000618220 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
SPPL2B-212ENST00000618220 CCDC18Q5T9S5 1454 aa30.03■■■□□ 2.4
SPPL2B-212ENST00000618220 CLSPNQ9HAW4 1339 aa30.03■■■□□ 2.4
SPPL2B-212ENST00000618220 NUP160Q12769 1436 aa30.01■■■□□ 2.39
SPPL2B-212ENST00000618220 EHBP1L1Q8N3D4 1523 aa30■■■□□ 2.39
SPPL2B-212ENST00000618220 SETD5Q9C0A6 1442 aa29.98■■■□□ 2.39
SPPL2B-212ENST00000618220 SUPT6HQ7KZ85 1726 aaKnown RBP29.97■■■□□ 2.39
SPPL2B-212ENST00000618220 MYOM3Q5VTT5 1437 aa29.96■■■□□ 2.39
SPPL2B-212ENST00000618220 NUP153P49790 1475 aaKnown RBP29.93■■■□□ 2.38
SPPL2B-212ENST00000618220 PLB1Q6P1J6 1458 aa29.92■■■□□ 2.38
SPPL2B-212ENST00000618220 PTPRKQ15262 1439 aa29.9■■■□□ 2.38
SPPL2B-212ENST00000618220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.89■■■□□ 2.385e-7■■■□□ 16.7
SPPL2B-212ENST00000618220 RAPGEF6Q8TEU7 1601 aa29.88■■■□□ 2.37
SPPL2B-212ENST00000618220 CARMIL2Q6F5E8 1435 aa29.87■■■□□ 2.37
SPPL2B-212ENST00000618220 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
SPPL2B-212ENST00000618220 CHIC2Q9UKJ5 165 aa29.81■■■□□ 2.36
SPPL2B-212ENST00000618220 PTPN23Q9H3S7 1636 aa29.81■■■□□ 2.36
SPPL2B-212ENST00000618220 CHD1O14646 1710 aa29.76■■■□□ 2.36
SPPL2B-212ENST00000618220 PRG4Q92954 1404 aaPredicted RBP29.76■■■□□ 2.35
SPPL2B-212ENST00000618220 MAPKBP1O60336 1514 aa29.76■■■□□ 2.35
SPPL2B-212ENST00000618220 CDK11AQ9UQ88 783 aaPredicted RBP29.75■■■□□ 2.35
SPPL2B-212ENST00000618220 RRP7BPQ9NSQ0 103 aa29.72■■■□□ 2.35
SPPL2B-212ENST00000618220 SIN3AQ96ST3 1273 aa29.71■■■□□ 2.35
SPPL2B-212ENST00000618220 ZNF644Q9H582 1327 aaPredicted RBP29.7■■■□□ 2.35
SPPL2B-212ENST00000618220 PELP1Q8IZL8 1130 aaKnown RBP29.67■■■□□ 2.34
SPPL2B-212ENST00000618220 HFM1A2PYH4 1435 aa29.66■■■□□ 2.34
SPPL2B-212ENST00000618220 TCOF1Q13428 1488 aaKnown RBP29.65■■■□□ 2.34
SPPL2B-212ENST00000618220 NAIPQ13075 1403 aa29.65■■■□□ 2.34
SPPL2B-212ENST00000618220 MIA2Q96PC5 1412 aa29.63■■■□□ 2.33
SPPL2B-212ENST00000618220 PTPRGP23470 1445 aa29.62■■■□□ 2.33
SPPL2B-212ENST00000618220 TROQ12816 1431 aaPredicted RBP29.62■■■□□ 2.33
SPPL2B-212ENST00000618220 ABCA8O94911 1581 aa29.59■■■□□ 2.33
SPPL2B-212ENST00000618220 ZNF777Q9ULD5 760 aaPredicted RBP29.58■■■□□ 2.33
SPPL2B-212ENST00000618220 ATP10BO94823 1461 aa29.57■■■□□ 2.32
SPPL2B-212ENST00000618220 KIF14Q15058 1648 aa29.57■■■□□ 2.32
SPPL2B-212ENST00000618220 PLEKHD1A6NEE1 506 aa29.56■■■□□ 2.32
SPPL2B-212ENST00000618220 CFDP1Q9UEE9 299 aaPredicted RBP29.54■■■□□ 2.32
SPPL2B-212ENST00000618220 ERCC6L2Q5T890 1561 aa29.54■■■□□ 2.32
SPPL2B-212ENST00000618220 UACAQ9BZF9 1416 aa29.48■■■□□ 2.31
SPPL2B-212ENST00000618220 GPATCH8Q9UKJ3 1502 aaKnown RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms