RNA–Protein interactions for RNA: ENST00000617548.1

ACACA-239, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,063 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-239ENST00000617548 JPH4Q96JJ6 628 aa39.24■■■■□ 3.87
ACACA-239ENST00000617548 PRG4Q92954 1404 aaPredicted RBP39.19■■■■□ 3.86
ACACA-239ENST00000617548 KIAA0586Q9BVV6 1533 aa39.14■■■■□ 3.86
ACACA-239ENST00000617548 TRHP20396 242 aaPredicted RBP39.06■■■■□ 3.84
ACACA-239ENST00000617548 RAPGEF2Q9Y4G8 1499 aa39.01■■■■□ 3.84
ACACA-239ENST00000617548 IQGAP2Q13576 1575 aa38.88■■■■□ 3.81
ACACA-239ENST00000617548 CARMIL2Q6F5E8 1435 aa38.78■■■■□ 3.8
ACACA-239ENST00000617548 PRXQ9BXM0 1461 aa38.73■■■■□ 3.79
ACACA-239ENST00000617548 TTBK1Q5TCY1 1321 aaPredicted RBP38.7■■■■□ 3.79
ACACA-239ENST00000617548 CSRNP3Q8WYN3 585 aa38.69■■■■□ 3.78
ACACA-239ENST00000617548 PTPRGP23470 1445 aa38.68■■■■□ 3.78
ACACA-239ENST00000617548 NPM1P06748 294 aaKnown RBP eCLIP38.66■■■■□ 3.78
ACACA-239ENST00000617548 TNIKQ9UKE5 1360 aa38.66■■■■□ 3.78
ACACA-239ENST00000617548 CTTNBP2Q8WZ74 1663 aa38.65■■■■□ 3.78
ACACA-239ENST00000617548 UGGT2Q9NYU1 1516 aa38.63■■■■□ 3.77
ACACA-239ENST00000617548 EEA1Q15075 1411 aa38.63■■■■□ 3.77
ACACA-239ENST00000617548 ADCY10Q96PN6 1610 aa38.61■■■■□ 3.77
ACACA-239ENST00000617548 DISP1Q96F81 1524 aa38.61■■■■□ 3.77
ACACA-239ENST00000617548 CHIC1Q5VXU3 224 aa38.58■■■■□ 3.77
ACACA-239ENST00000617548 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
ACACA-239ENST00000617548 KIAA0556O60303 1618 aa38.5■■■■□ 3.75
ACACA-239ENST00000617548 GOLGA3Q08378 1498 aa38.43■■■■□ 3.74
ACACA-239ENST00000617548 MAPKBP1O60336 1514 aa38.42■■■■□ 3.74
ACACA-239ENST00000617548 UACAQ9BZF9 1416 aa38.39■■■■□ 3.74
ACACA-239ENST00000617548 KIF13AQ9H1H9 1805 aa38.35■■■■□ 3.73
ACACA-239ENST00000617548 ABCC2Q92887 1545 aa38.35■■■■□ 3.73
ACACA-239ENST00000617548 UHRF1BP1LA0JNW5 1464 aa38.35■■■■□ 3.73
ACACA-239ENST00000617548 ABCC10Q5T3U5 1492 aa38.31■■■■□ 3.72
ACACA-239ENST00000617548 FAM69CQ0P6D2 419 aa38.31■■■■□ 3.72
ACACA-239ENST00000617548 KIF21BO75037 1637 aa38.24■■■■□ 3.71
ACACA-239ENST00000617548 DIP2BQ9P265 1576 aa38.23■■■■□ 3.71
ACACA-239ENST00000617548 P3H3Q8IVL6 736 aa38.21■■■■□ 3.71
ACACA-239ENST00000617548 PLB1Q6P1J6 1458 aa38.18■■■■□ 3.7
ACACA-239ENST00000617548 ASXL2Q76L83 1435 aa38.16■■■■□ 3.7
ACACA-239ENST00000617548 RANGAP1P46060 587 aaPredicted RBP38.16■■■■□ 3.7
ACACA-239ENST00000617548 KDM5BQ9UGL1 1544 aa38.16■■■■□ 3.7
ACACA-239ENST00000617548 EHMT2Q96KQ7 1210 aa38.13■■■■□ 3.69
ACACA-239ENST00000617548 ZCCHC11Q5TAX3 1644 aaKnown RBP38.12■■■■□ 3.69
ACACA-239ENST00000617548 SAMD9Q5K651 1589 aa38.1■■■■□ 3.69
ACACA-239ENST00000617548 ABCA8O94911 1581 aa38.09■■■■□ 3.69
ACACA-239ENST00000617548 UBTFP17480 764 aaKnown RBP38.04■■■■□ 3.68
ACACA-239ENST00000617548 TSPOAP1O95153 1857 aa37.99■■■■□ 3.67
ACACA-239ENST00000617548 GLI2P10070 1586 aa37.93■■■■□ 3.66
ACACA-239ENST00000617548 FHOD3Q2V2M9 1422 aa37.92■■■■□ 3.66
ACACA-239ENST00000617548 EPRSP07814 1512 aaKnown RBP37.92■■■■□ 3.66
ACACA-239ENST00000617548 WDR7Q9Y4E6 1490 aa37.9■■■■□ 3.66
ACACA-239ENST00000617548 EFCAB5A4FU69 1503 aa37.89■■■■□ 3.66
ACACA-239ENST00000617548 ARID3CA6NKF2 412 aa37.89■■■■□ 3.66
ACACA-239ENST00000617548 RAPGEF6Q8TEU7 1601 aa37.85■■■■□ 3.65
ACACA-239ENST00000617548 ATP10BO94823 1461 aa37.8■■■■□ 3.64
ACACA-239ENST00000617548 KCNH8Q96L42 1107 aa37.8■■■■□ 3.64
ACACA-239ENST00000617548 MAP3K4Q9Y6R4 1608 aa37.76■■■■□ 3.64
ACACA-239ENST00000617548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.75■■■■□ 3.63
ACACA-239ENST00000617548 HNRNPUL2Q1KMD3 747 aaKnown RBP37.75■■■■□ 3.63
ACACA-239ENST00000617548 KDM6BO15054 1643 aa37.75■■■■□ 3.63
ACACA-239ENST00000617548 PPRC1Q5VV67 1664 aaKnown RBP37.73■■■■□ 3.63
ACACA-239ENST00000617548 NUP153P49790 1475 aaKnown RBP37.7■■■■□ 3.63
ACACA-239ENST00000617548 TEX14Q8IWB6 1497 aa37.66■■■■□ 3.62
ACACA-239ENST00000617548 ARHGAP35Q9NRY4 1499 aa37.64■■■■□ 3.62
ACACA-239ENST00000617548 CFAP43Q8NDM7 1665 aa37.62■■■■□ 3.61
ACACA-239ENST00000617548 CD109Q6YHK3 1445 aa37.61■■■■□ 3.61
ACACA-239ENST00000617548 FMN1Q68DA7 1419 aa37.57■■■■□ 3.6
ACACA-239ENST00000617548 ATP1B4Q9UN42 357 aaPredicted RBP37.53■■■■□ 3.6
ACACA-239ENST00000617548 MAGI3Q5TCQ9 1506 aa37.51■■■■□ 3.6
ACACA-239ENST00000617548 PLEKHD1A6NEE1 506 aa37.51■■■■□ 3.6
ACACA-239ENST00000617548 ABCA9Q8IUA7 1624 aa37.45■■■■□ 3.59
ACACA-239ENST00000617548 HECW1Q76N89 1606 aa37.43■■■■□ 3.58
ACACA-239ENST00000617548 COL17A1Q9UMD9 1497 aaPredicted RBP37.43■■■■□ 3.58
ACACA-239ENST00000617548 CDK13Q14004 1512 aaKnown RBP37.41■■■■□ 3.58
ACACA-239ENST00000617548 AEBP2Q6ZN18 517 aaPredicted RBP37.38■■■■□ 3.57
ACACA-239ENST00000617548 CLIP1P30622 1438 aa37.34■■■■□ 3.57
ACACA-239ENST00000617548 CDK11AQ9UQ88 783 aaPredicted RBP37.28■■■■□ 3.56
ACACA-239ENST00000617548 PHLDB1Q86UU1 1377 aa37.23■■■■□ 3.55
ACACA-239ENST00000617548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.23■■■■□ 3.55
ACACA-239ENST00000617548 CASKIN1Q8WXD9 1431 aa37.22■■■■□ 3.55
ACACA-239ENST00000617548 PCF11O94913 1555 aaKnown RBP37.21■■■■□ 3.55
ACACA-239ENST00000617548 ARAP3Q8WWN8 1544 aa37.2■■■■□ 3.55
ACACA-239ENST00000617548 NEO1Q92859 1461 aa37.2■■■■□ 3.54
ACACA-239ENST00000617548 LRRIQ1Q96JM4 1722 aa37.18■■■■□ 3.54
ACACA-239ENST00000617548 TTC37Q6PGP7 1564 aa37.17■■■■□ 3.54
ACACA-239ENST00000617548 CCDC18Q5T9S5 1454 aa37.13■■■■□ 3.53
ACACA-239ENST00000617548 FYCO1Q9BQS8 1478 aa37.12■■■■□ 3.53
ACACA-239ENST00000617548 TROQ12816 1431 aaPredicted RBP37.1■■■■□ 3.53
ACACA-239ENST00000617548 FANCAO15360 1455 aa37.08■■■■□ 3.53
ACACA-239ENST00000617548 CEP162Q5TB80 1403 aa37.07■■■■□ 3.52
ACACA-239ENST00000617548 CFAP74Q9C0B2 1584 aa37.07■■■■□ 3.52
ACACA-239ENST00000617548 KIF14Q15058 1648 aa37.07■■■■□ 3.52
ACACA-239ENST00000617548 RAPGEF3O95398 923 aa37.06■■■■□ 3.52
ACACA-239ENST00000617548 KDM4FA0A1W2PPD8 638 aa37.05■■■■□ 3.52
ACACA-239ENST00000617548 LOC105371045A0A1W2PR82 267 aa37.05■■■■□ 3.52
ACACA-239ENST00000617548 AKNAQ7Z591 1439 aa37.03■■■■□ 3.52
ACACA-239ENST00000617548 PLCH2O75038 1416 aa37.02■■■■□ 3.52
ACACA-239ENST00000617548 MYO5CQ9NQX4 1742 aa36.98■■■■□ 3.51
ACACA-239ENST00000617548 DENND4BO75064 1496 aaPredicted RBP36.95■■■■□ 3.51
ACACA-239ENST00000617548 ADGRL1O94910 1474 aa36.94■■■■□ 3.5
ACACA-239ENST00000617548 FRMPD1Q5SYB0 1578 aa36.92■■■■□ 3.5
ACACA-239ENST00000617548 EFCAB2Q5VUJ9 269 aa36.92■■■■□ 3.5
ACACA-239ENST00000617548 ARHGAP5Q13017 1502 aa36.86■■■■□ 3.49
ACACA-239ENST00000617548 RICTORQ6R327 1708 aa36.86■■■■□ 3.49
ACACA-239ENST00000617548 SCAPERQ9BY12 1400 aa36.84■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms