RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 JPH4Q96JJ6 628 aa31.66■■■□□ 2.66
SUSD3-205ENST00000617293 RAPGEF2Q9Y4G8 1499 aa31.64■■■□□ 2.66
SUSD3-205ENST00000617293 SHROOM2Q13796 1616 aa31.64■■■□□ 2.65
SUSD3-205ENST00000617293 KIAA0586Q9BVV6 1533 aa31.61■■■□□ 2.65
SUSD3-205ENST00000617293 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
SUSD3-205ENST00000617293 PRG4Q92954 1404 aaPredicted RBP31.57■■■□□ 2.64
SUSD3-205ENST00000617293 CSRNP3Q8WYN3 585 aa31.55■■■□□ 2.64
SUSD3-205ENST00000617293 FAM9AQ8IZU1 332 aaPredicted RBP31.51■■■□□ 2.63
SUSD3-205ENST00000617293 EEA1Q15075 1411 aa31.49■■■□□ 2.63
SUSD3-205ENST00000617293 PRXQ9BXM0 1461 aa31.49■■■□□ 2.63
SUSD3-205ENST00000617293 IQGAP2Q13576 1575 aa31.43■■■□□ 2.62
SUSD3-205ENST00000617293 CTTNBP2Q8WZ74 1663 aa31.32■■■□□ 2.6
SUSD3-205ENST00000617293 CARMIL2Q6F5E8 1435 aa31.3■■■□□ 2.6
SUSD3-205ENST00000617293 TTBK1Q5TCY1 1321 aaPredicted RBP31.25■■■□□ 2.59
SUSD3-205ENST00000617293 UGGT2Q9NYU1 1516 aa31.24■■■□□ 2.59
SUSD3-205ENST00000617293 DISP1Q96F81 1524 aa31.21■■■□□ 2.59
SUSD3-205ENST00000617293 PTPRGP23470 1445 aa31.2■■■□□ 2.59
SUSD3-205ENST00000617293 TNIKQ9UKE5 1360 aa31.19■■■□□ 2.58
SUSD3-205ENST00000617293 KIF21BO75037 1637 aa31.16■■■□□ 2.58
SUSD3-205ENST00000617293 TRHP20396 242 aaPredicted RBP31.16■■■□□ 2.58
SUSD3-205ENST00000617293 EHMT2Q96KQ7 1210 aa31.15■■■□□ 2.58
SUSD3-205ENST00000617293 KIAA0556O60303 1618 aa31.13■■■□□ 2.57
SUSD3-205ENST00000617293 GOLGA3Q08378 1498 aa31.09■■■□□ 2.57
SUSD3-205ENST00000617293 NPM1P06748 294 aaKnown RBP eCLIP31.07■■■□□ 2.56
SUSD3-205ENST00000617293 ADCY10Q96PN6 1610 aa31.06■■■□□ 2.56
SUSD3-205ENST00000617293 UBTFP17480 764 aaKnown RBP31.04■■■□□ 2.56
SUSD3-205ENST00000617293 RANGAP1P46060 587 aaPredicted RBP31.04■■■□□ 2.56
SUSD3-205ENST00000617293 P3H3Q8IVL6 736 aa31.01■■■□□ 2.55
SUSD3-205ENST00000617293 UACAQ9BZF9 1416 aa30.97■■■□□ 2.55
SUSD3-205ENST00000617293 UHRF1BP1LA0JNW5 1464 aa30.9■■■□□ 2.54
SUSD3-205ENST00000617293 SAMD9Q5K651 1589 aa30.89■■■□□ 2.54
SUSD3-205ENST00000617293 ABCC2Q92887 1545 aa30.88■■■□□ 2.53
SUSD3-205ENST00000617293 PLB1Q6P1J6 1458 aa30.85■■■□□ 2.53
SUSD3-205ENST00000617293 MAPKBP1O60336 1514 aa30.84■■■□□ 2.53
SUSD3-205ENST00000617293 ABCA8O94911 1581 aa30.78■■■□□ 2.52
SUSD3-205ENST00000617293 FHOD3Q2V2M9 1422 aa30.77■■■□□ 2.52
SUSD3-205ENST00000617293 EFCAB5A4FU69 1503 aa30.76■■■□□ 2.51
SUSD3-205ENST00000617293 KDM5BQ9UGL1 1544 aa30.76■■■□□ 2.51
SUSD3-205ENST00000617293 FAM69CQ0P6D2 419 aa30.74■■■□□ 2.51
SUSD3-205ENST00000617293 KIF13AQ9H1H9 1805 aa30.73■■■□□ 2.51
SUSD3-205ENST00000617293 ABCC10Q5T3U5 1492 aa30.73■■■□□ 2.51
SUSD3-205ENST00000617293 ZCCHC11Q5TAX3 1644 aaKnown RBP30.72■■■□□ 2.51
SUSD3-205ENST00000617293 ASXL2Q76L83 1435 aa30.71■■■□□ 2.51
SUSD3-205ENST00000617293 ARID3CA6NKF2 412 aa30.67■■■□□ 2.5
SUSD3-205ENST00000617293 DIP2BQ9P265 1576 aa30.66■■■□□ 2.5
SUSD3-205ENST00000617293 RAPGEF6Q8TEU7 1601 aa30.64■■■□□ 2.5
SUSD3-205ENST00000617293 ARHGAP35Q9NRY4 1499 aa30.63■■■□□ 2.49
SUSD3-205ENST00000617293 ATP10BO94823 1461 aa30.57■■■□□ 2.48
SUSD3-205ENST00000617293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.55■■■□□ 2.48
SUSD3-205ENST00000617293 HNRNPUL2Q1KMD3 747 aaKnown RBP30.55■■■□□ 2.48
SUSD3-205ENST00000617293 WDR7Q9Y4E6 1490 aa30.53■■■□□ 2.48
SUSD3-205ENST00000617293 NUP153P49790 1475 aaKnown RBP30.52■■■□□ 2.48
SUSD3-205ENST00000617293 EPRSP07814 1512 aaKnown RBP30.52■■■□□ 2.48
SUSD3-205ENST00000617293 FMN1Q68DA7 1419 aa30.51■■■□□ 2.47
SUSD3-205ENST00000617293 KCNH8Q96L42 1107 aa30.51■■■□□ 2.47
SUSD3-205ENST00000617293 TSPOAP1O95153 1857 aa30.5■■■□□ 2.47
SUSD3-205ENST00000617293 GLI2P10070 1586 aa30.49■■■□□ 2.47
SUSD3-205ENST00000617293 LOC105371045A0A1W2PR82 267 aa30.48■■■□□ 2.47
SUSD3-205ENST00000617293 ATP1B4Q9UN42 357 aaPredicted RBP30.48■■■□□ 2.47
SUSD3-205ENST00000617293 CLIP1P30622 1438 aa30.47■■■□□ 2.47
SUSD3-205ENST00000617293 PLEKHD1A6NEE1 506 aa30.36■■■□□ 2.45
SUSD3-205ENST00000617293 MAP3K4Q9Y6R4 1608 aa30.36■■■□□ 2.45
SUSD3-205ENST00000617293 HECW1Q76N89 1606 aa30.35■■■□□ 2.45
SUSD3-205ENST00000617293 CDK13Q14004 1512 aaKnown RBP30.32■■■□□ 2.44
SUSD3-205ENST00000617293 CEP162Q5TB80 1403 aa30.32■■■□□ 2.44
SUSD3-205ENST00000617293 PPRC1Q5VV67 1664 aaKnown RBP30.3■■■□□ 2.44
SUSD3-205ENST00000617293 CD109Q6YHK3 1445 aa30.29■■■□□ 2.44
SUSD3-205ENST00000617293 CFAP43Q8NDM7 1665 aa30.27■■■□□ 2.44
SUSD3-205ENST00000617293 CASKIN1Q8WXD9 1431 aa30.26■■■□□ 2.43
SUSD3-205ENST00000617293 PCF11O94913 1555 aaKnown RBP30.25■■■□□ 2.43
SUSD3-205ENST00000617293 TEX14Q8IWB6 1497 aa30.24■■■□□ 2.43
SUSD3-205ENST00000617293 CDK11AQ9UQ88 783 aaPredicted RBP30.22■■■□□ 2.43
SUSD3-205ENST00000617293 KDM6BO15054 1643 aa30.21■■■□□ 2.43
SUSD3-205ENST00000617293 LRRIQ1Q96JM4 1722 aa30.2■■■□□ 2.43
SUSD3-205ENST00000617293 ABCA9Q8IUA7 1624 aa30.2■■■□□ 2.43
SUSD3-205ENST00000617293 MAGI3Q5TCQ9 1506 aa30.18■■■□□ 2.42
SUSD3-205ENST00000617293 FYCO1Q9BQS8 1478 aa30.17■■■□□ 2.42
SUSD3-205ENST00000617293 CCDC18Q5T9S5 1454 aa30.13■■■□□ 2.41
SUSD3-205ENST00000617293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.09■■■□□ 2.41
SUSD3-205ENST00000617293 TROQ12816 1431 aaPredicted RBP30.07■■■□□ 2.4
SUSD3-205ENST00000617293 COL17A1Q9UMD9 1497 aaPredicted RBP30.06■■■□□ 2.4
SUSD3-205ENST00000617293 TTC37Q6PGP7 1564 aa30.03■■■□□ 2.4
SUSD3-205ENST00000617293 KIF14Q15058 1648 aa30■■■□□ 2.39
SUSD3-205ENST00000617293 NEO1Q92859 1461 aa29.96■■■□□ 2.39
SUSD3-205ENST00000617293 PHLDB1Q86UU1 1377 aa29.96■■■□□ 2.39
SUSD3-205ENST00000617293 VPS8Q8N3P4 1428 aa29.95■■■□□ 2.38
SUSD3-205ENST00000617293 PLCH2O75038 1416 aa29.93■■■□□ 2.38
SUSD3-205ENST00000617293 FANCAO15360 1455 aa29.93■■■□□ 2.38
SUSD3-205ENST00000617293 ARAP3Q8WWN8 1544 aa29.92■■■□□ 2.38
SUSD3-205ENST00000617293 MYO5CQ9NQX4 1742 aa29.9■■■□□ 2.38
SUSD3-205ENST00000617293 AKNAQ7Z591 1439 aa29.88■■■□□ 2.37
SUSD3-205ENST00000617293 MTUS2Q5JR59 1369 aa29.88■■■□□ 2.37
SUSD3-205ENST00000617293 CFAP74Q9C0B2 1584 aa29.87■■■□□ 2.37
SUSD3-205ENST00000617293 RAPGEF3O95398 923 aa29.86■■■□□ 2.37
SUSD3-205ENST00000617293 EFCAB2Q5VUJ9 269 aa29.85■■■□□ 2.37
SUSD3-205ENST00000617293 ARHGAP5Q13017 1502 aa29.81■■■□□ 2.36
SUSD3-205ENST00000617293 DENND4BO75064 1496 aaPredicted RBP29.78■■■□□ 2.36
SUSD3-205ENST00000617293 CDC42BPBQ9Y5S2 1711 aa29.77■■■□□ 2.36
SUSD3-205ENST00000617293 EHBP1L1Q8N3D4 1523 aa29.76■■■□□ 2.36
SUSD3-205ENST00000617293 ADGRL1O94910 1474 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms