RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 KIAA0586Q9BVV6 1533 aa26.21■■□□□ 1.79
SRGAP2C-205ENST00000617209 ERCC6L2Q5T890 1561 aa26.18■■□□□ 1.78
SRGAP2C-205ENST00000617209 PRG4Q92954 1404 aaPredicted RBP26.15■■□□□ 1.78
SRGAP2C-205ENST00000617209 RAPGEF2Q9Y4G8 1499 aa26.14■■□□□ 1.78
SRGAP2C-205ENST00000617209 PRXQ9BXM0 1461 aa26.03■■□□□ 1.76
SRGAP2C-205ENST00000617209 IQGAP2Q13576 1575 aa26.01■■□□□ 1.75
SRGAP2C-205ENST00000617209 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
SRGAP2C-205ENST00000617209 EEA1Q15075 1411 aa26■■□□□ 1.75
SRGAP2C-205ENST00000617209 CSRNP3Q8WYN3 585 aa25.99■■□□□ 1.75
SRGAP2C-205ENST00000617209 CARMIL2Q6F5E8 1435 aa25.93■■□□□ 1.74
SRGAP2C-205ENST00000617209 UGGT2Q9NYU1 1516 aa25.89■■□□□ 1.74
SRGAP2C-205ENST00000617209 CTTNBP2Q8WZ74 1663 aa25.89■■□□□ 1.73
SRGAP2C-205ENST00000617209 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
SRGAP2C-205ENST00000617209 TNIKQ9UKE5 1360 aa25.84■■□□□ 1.73
SRGAP2C-205ENST00000617209 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
SRGAP2C-205ENST00000617209 PTPRGP23470 1445 aa25.84■■□□□ 1.73
SRGAP2C-205ENST00000617209 FAM9AQ8IZU1 332 aaPredicted RBP25.76■■□□□ 1.71
SRGAP2C-205ENST00000617209 ADCY10Q96PN6 1610 aa25.76■■□□□ 1.71
SRGAP2C-205ENST00000617209 NPM1P06748 294 aaKnown RBP eCLIP25.75■■□□□ 1.71
SRGAP2C-205ENST00000617209 KIAA0556O60303 1618 aa25.74■■□□□ 1.71
SRGAP2C-205ENST00000617209 GOLGA3Q08378 1498 aa25.73■■□□□ 1.71
SRGAP2C-205ENST00000617209 KIF21BO75037 1637 aa25.7■■□□□ 1.71
SRGAP2C-205ENST00000617209 UHRF1BP1LA0JNW5 1464 aa25.67■■□□□ 1.7
SRGAP2C-205ENST00000617209 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
SRGAP2C-205ENST00000617209 UACAQ9BZF9 1416 aa25.66■■□□□ 1.7
SRGAP2C-205ENST00000617209 MAPKBP1O60336 1514 aa25.66■■□□□ 1.7
SRGAP2C-205ENST00000617209 ABCC2Q92887 1545 aa25.62■■□□□ 1.69
SRGAP2C-205ENST00000617209 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.68
SRGAP2C-205ENST00000617209 SAMD9Q5K651 1589 aa25.56■■□□□ 1.68
SRGAP2C-205ENST00000617209 ABCC10Q5T3U5 1492 aa25.55■■□□□ 1.68
SRGAP2C-205ENST00000617209 KDM5BQ9UGL1 1544 aa25.54■■□□□ 1.68
SRGAP2C-205ENST00000617209 ABCA8O94911 1581 aa25.5■■□□□ 1.67
SRGAP2C-205ENST00000617209 PLB1Q6P1J6 1458 aa25.5■■□□□ 1.67
SRGAP2C-205ENST00000617209 DIP2BQ9P265 1576 aa25.48■■□□□ 1.67
SRGAP2C-205ENST00000617209 FAM69CQ0P6D2 419 aa25.48■■□□□ 1.67
SRGAP2C-205ENST00000617209 P3H3Q8IVL6 736 aa25.48■■□□□ 1.67
SRGAP2C-205ENST00000617209 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
SRGAP2C-205ENST00000617209 ASXL2Q76L83 1435 aa25.46■■□□□ 1.67
SRGAP2C-205ENST00000617209 ZCCHC11Q5TAX3 1644 aaKnown RBP25.45■■□□□ 1.66
SRGAP2C-205ENST00000617209 EFCAB5A4FU69 1503 aa25.42■■□□□ 1.66
SRGAP2C-205ENST00000617209 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.66
SRGAP2C-205ENST00000617209 GLI2P10070 1586 aa25.37■■□□□ 1.65
SRGAP2C-205ENST00000617209 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
SRGAP2C-205ENST00000617209 FHOD3Q2V2M9 1422 aa25.34■■□□□ 1.65
SRGAP2C-205ENST00000617209 RAPGEF6Q8TEU7 1601 aa25.33■■□□□ 1.65
SRGAP2C-205ENST00000617209 EPRSP07814 1512 aaKnown RBP25.32■■□□□ 1.64
SRGAP2C-205ENST00000617209 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
SRGAP2C-205ENST00000617209 ATP10BO94823 1461 aa25.3■■□□□ 1.64
SRGAP2C-205ENST00000617209 TSPOAP1O95153 1857 aa25.26■■□□□ 1.63
SRGAP2C-205ENST00000617209 ARHGAP35Q9NRY4 1499 aa25.26■■□□□ 1.63
SRGAP2C-205ENST00000617209 NUP153P49790 1475 aaKnown RBP25.23■■□□□ 1.63
SRGAP2C-205ENST00000617209 MAP3K4Q9Y6R4 1608 aa25.22■■□□□ 1.63
SRGAP2C-205ENST00000617209 FMN1Q68DA7 1419 aa25.2■■□□□ 1.63
SRGAP2C-205ENST00000617209 PPRC1Q5VV67 1664 aaKnown RBP25.18■■□□□ 1.62
SRGAP2C-205ENST00000617209 ARID3CA6NKF2 412 aa25.17■■□□□ 1.62
SRGAP2C-205ENST00000617209 KCNH8Q96L42 1107 aa25.17■■□□□ 1.62
SRGAP2C-205ENST00000617209 CFAP43Q8NDM7 1665 aa25.15■■□□□ 1.62
SRGAP2C-205ENST00000617209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.13■■□□□ 1.61
SRGAP2C-205ENST00000617209 HNRNPUL2Q1KMD3 747 aaKnown RBP25.13■■□□□ 1.61
SRGAP2C-205ENST00000617209 TEX14Q8IWB6 1497 aa25.11■■□□□ 1.61
SRGAP2C-205ENST00000617209 PLEKHD1A6NEE1 506 aa25.1■■□□□ 1.61
SRGAP2C-205ENST00000617209 KDM6BO15054 1643 aa25.1■■□□□ 1.61
SRGAP2C-205ENST00000617209 CD109Q6YHK3 1445 aa25.1■■□□□ 1.61
SRGAP2C-205ENST00000617209 MAGI3Q5TCQ9 1506 aa25.09■■□□□ 1.61
SRGAP2C-205ENST00000617209 CLIP1P30622 1438 aa25.06■■□□□ 1.6
SRGAP2C-205ENST00000617209 HECW1Q76N89 1606 aa25.06■■□□□ 1.6
SRGAP2C-205ENST00000617209 ABCA9Q8IUA7 1624 aa25.06■■□□□ 1.6
SRGAP2C-205ENST00000617209 ATP1B4Q9UN42 357 aaPredicted RBP25■■□□□ 1.59
SRGAP2C-205ENST00000617209 CDK13Q14004 1512 aaKnown RBP25■■□□□ 1.59
SRGAP2C-205ENST00000617209 CASKIN1Q8WXD9 1431 aa24.99■■□□□ 1.59
SRGAP2C-205ENST00000617209 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
SRGAP2C-205ENST00000617209 COL17A1Q9UMD9 1497 aaPredicted RBP24.97■■□□□ 1.59
SRGAP2C-205ENST00000617209 PHLDB1Q86UU1 1377 aa24.94■■□□□ 1.58
SRGAP2C-205ENST00000617209 LRRIQ1Q96JM4 1722 aa24.94■■□□□ 1.58
SRGAP2C-205ENST00000617209 PCF11O94913 1555 aaKnown RBP24.91■■□□□ 1.58
SRGAP2C-205ENST00000617209 FYCO1Q9BQS8 1478 aa24.9■■□□□ 1.58
SRGAP2C-205ENST00000617209 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
SRGAP2C-205ENST00000617209 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
SRGAP2C-205ENST00000617209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.9■■□□□ 1.58
SRGAP2C-205ENST00000617209 ARAP3Q8WWN8 1544 aa24.89■■□□□ 1.57
SRGAP2C-205ENST00000617209 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.57
SRGAP2C-205ENST00000617209 NEO1Q92859 1461 aa24.88■■□□□ 1.57
SRGAP2C-205ENST00000617209 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
SRGAP2C-205ENST00000617209 TTC37Q6PGP7 1564 aa24.83■■□□□ 1.57
SRGAP2C-205ENST00000617209 PLCH2O75038 1416 aa24.78■■□□□ 1.56
SRGAP2C-205ENST00000617209 KIF14Q15058 1648 aa24.78■■□□□ 1.56
SRGAP2C-205ENST00000617209 CFAP74Q9C0B2 1584 aa24.77■■□□□ 1.56
SRGAP2C-205ENST00000617209 FANCAO15360 1455 aa24.77■■□□□ 1.56
SRGAP2C-205ENST00000617209 AKNAQ7Z591 1439 aa24.74■■□□□ 1.55
SRGAP2C-205ENST00000617209 MYO5CQ9NQX4 1742 aa24.74■■□□□ 1.55
SRGAP2C-205ENST00000617209 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.54
SRGAP2C-205ENST00000617209 RAPGEF3O95398 923 aa24.69■■□□□ 1.54
SRGAP2C-205ENST00000617209 DENND4BO75064 1496 aaPredicted RBP24.67■■□□□ 1.54
SRGAP2C-205ENST00000617209 RICTORQ6R327 1708 aa24.65■■□□□ 1.54
SRGAP2C-205ENST00000617209 FRMPD1Q5SYB0 1578 aa24.64■■□□□ 1.54
SRGAP2C-205ENST00000617209 VPS8Q8N3P4 1428 aa24.64■■□□□ 1.54
SRGAP2C-205ENST00000617209 CDC42BPBQ9Y5S2 1711 aa24.64■■□□□ 1.53
SRGAP2C-205ENST00000617209 AEBP2Q6ZN18 517 aaPredicted RBP24.63■■□□□ 1.53
SRGAP2C-205ENST00000617209 KDM4FA0A1W2PPD8 638 aa24.62■■□□□ 1.53
SRGAP2C-205ENST00000617209 ADGRL1O94910 1474 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms