RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ERCC6L2Q5T890 1561 aa16.63■□□□□ 0.25
TARDBP-218ENST00000617172 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
TARDBP-218ENST00000617172 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
TARDBP-218ENST00000617172 CUL7Q14999 1698 aa16.59■□□□□ 0.25
TARDBP-218ENST00000617172 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
TARDBP-218ENST00000617172 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
TARDBP-218ENST00000617172 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
TARDBP-218ENST00000617172 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
TARDBP-218ENST00000617172 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
TARDBP-218ENST00000617172 PTPRGP23470 1445 aa16.45■□□□□ 0.22
TARDBP-218ENST00000617172 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
TARDBP-218ENST00000617172 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
TARDBP-218ENST00000617172 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
TARDBP-218ENST00000617172 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
TARDBP-218ENST00000617172 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
TARDBP-218ENST00000617172 MAPKBP1O60336 1514 aa16.36■□□□□ 0.21
TARDBP-218ENST00000617172 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
TARDBP-218ENST00000617172 UGGT2Q9NYU1 1516 aa16.33■□□□□ 0.2
TARDBP-218ENST00000617172 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
TARDBP-218ENST00000617172 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
TARDBP-218ENST00000617172 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
TARDBP-218ENST00000617172 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
TARDBP-218ENST00000617172 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
TARDBP-218ENST00000617172 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
TARDBP-218ENST00000617172 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
TARDBP-218ENST00000617172 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
TARDBP-218ENST00000617172 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
TARDBP-218ENST00000617172 PLB1Q6P1J6 1458 aa16.25■□□□□ 0.19
TARDBP-218ENST00000617172 DIP2BQ9P265 1576 aa16.24■□□□□ 0.19
TARDBP-218ENST00000617172 EEA1Q15075 1411 aa16.22■□□□□ 0.19
TARDBP-218ENST00000617172 ASXL2Q76L83 1435 aa16.22■□□□□ 0.19
TARDBP-218ENST00000617172 KIAA0556O60303 1618 aa16.22■□□□□ 0.19
TARDBP-218ENST00000617172 KDM5BQ9UGL1 1544 aa16.2■□□□□ 0.18
TARDBP-218ENST00000617172 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
TARDBP-218ENST00000617172 GLI2P10070 1586 aa16.14■□□□□ 0.17
TARDBP-218ENST00000617172 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
TARDBP-218ENST00000617172 P3H3Q8IVL6 736 aa16.1■□□□□ 0.17
TARDBP-218ENST00000617172 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
TARDBP-218ENST00000617172 ABCA8O94911 1581 aa16.09■□□□□ 0.17
TARDBP-218ENST00000617172 KDM6BO15054 1643 aa16.08■□□□□ 0.17
TARDBP-218ENST00000617172 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.17
TARDBP-218ENST00000617172 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
TARDBP-218ENST00000617172 KCNH8Q96L42 1107 aa16.06■□□□□ 0.16
TARDBP-218ENST00000617172 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
TARDBP-218ENST00000617172 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
TARDBP-218ENST00000617172 CD109Q6YHK3 1445 aa16.01■□□□□ 0.15
TARDBP-218ENST00000617172 SAMD9Q5K651 1589 aa16■□□□□ 0.15
TARDBP-218ENST00000617172 ATP10BO94823 1461 aa16■□□□□ 0.15
TARDBP-218ENST00000617172 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
TARDBP-218ENST00000617172 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
TARDBP-218ENST00000617172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
TARDBP-218ENST00000617172 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
TARDBP-218ENST00000617172 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
TARDBP-218ENST00000617172 PPRC1Q5VV67 1664 aaKnown RBP15.98■□□□□ 0.15
TARDBP-218ENST00000617172 KIF21BO75037 1637 aa15.97■□□□□ 0.15
TARDBP-218ENST00000617172 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
TARDBP-218ENST00000617172 COL17A1Q9UMD9 1497 aaPredicted RBP15.96■□□□□ 0.14
TARDBP-218ENST00000617172 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
TARDBP-218ENST00000617172 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
TARDBP-218ENST00000617172 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
TARDBP-218ENST00000617172 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
TARDBP-218ENST00000617172 PHLDB1Q86UU1 1377 aa15.92■□□□□ 0.14
TARDBP-218ENST00000617172 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
TARDBP-218ENST00000617172 CFAP43Q8NDM7 1665 aa15.91■□□□□ 0.14
TARDBP-218ENST00000617172 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
TARDBP-218ENST00000617172 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
TARDBP-218ENST00000617172 ARAP3Q8WWN8 1544 aa15.85■□□□□ 0.13
TARDBP-218ENST00000617172 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
TARDBP-218ENST00000617172 ABCA9Q8IUA7 1624 aa15.83■□□□□ 0.13
TARDBP-218ENST00000617172 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-218ENST00000617172 NEO1Q92859 1461 aa15.81■□□□□ 0.12
TARDBP-218ENST00000617172 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
TARDBP-218ENST00000617172 ADGRL1O94910 1474 aa15.79■□□□□ 0.12
TARDBP-218ENST00000617172 ARHGAP35Q9NRY4 1499 aa15.79■□□□□ 0.12
TARDBP-218ENST00000617172 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
TARDBP-218ENST00000617172 AKNAQ7Z591 1439 aa15.72■□□□□ 0.11
TARDBP-218ENST00000617172 CDK13Q14004 1512 aaKnown RBP15.72■□□□□ 0.11
TARDBP-218ENST00000617172 FANCAO15360 1455 aa15.71■□□□□ 0.11
TARDBP-218ENST00000617172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
TARDBP-218ENST00000617172 HECW1Q76N89 1606 aa15.71■□□□□ 0.11
TARDBP-218ENST00000617172 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-218ENST00000617172 PLCH2O75038 1416 aa15.69■□□□□ 0.1
TARDBP-218ENST00000617172 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
TARDBP-218ENST00000617172 CLIP1P30622 1438 aa15.67■□□□□ 0.1
TARDBP-218ENST00000617172 TROQ12816 1431 aaPredicted RBP15.67■□□□□ 0.1
TARDBP-218ENST00000617172 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
TARDBP-218ENST00000617172 CFAP74Q9C0B2 1584 aa15.66■□□□□ 0.1
TARDBP-218ENST00000617172 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
TARDBP-218ENST00000617172 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
TARDBP-218ENST00000617172 CCDC18Q5T9S5 1454 aa15.63■□□□□ 0.09
TARDBP-218ENST00000617172 SCAPERQ9BY12 1400 aa15.62■□□□□ 0.09
TARDBP-218ENST00000617172 MAGI2Q86UL8 1455 aa15.62■□□□□ 0.09
TARDBP-218ENST00000617172 FRMPD1Q5SYB0 1578 aa15.61■□□□□ 0.09
TARDBP-218ENST00000617172 KIF14Q15058 1648 aa15.59■□□□□ 0.09
TARDBP-218ENST00000617172 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
TARDBP-218ENST00000617172 ZMYM4Q5VZL5 1548 aa15.58■□□□□ 0.08
TARDBP-218ENST00000617172 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
TARDBP-218ENST00000617172 RICTORQ6R327 1708 aa15.56■□□□□ 0.08
TARDBP-218ENST00000617172 ARHGAP5Q13017 1502 aa15.55■□□□□ 0.08
TARDBP-218ENST00000617172 ARHGEF40Q8TER5 1519 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms