RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
SPTSSB-204ENST00000617024 EEA1Q15075 1411 aa27.21■■□□□ 1.95
SPTSSB-204ENST00000617024 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.94
SPTSSB-204ENST00000617024 CSRNP3Q8WYN3 585 aa27.2■■□□□ 1.94
SPTSSB-204ENST00000617024 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
SPTSSB-204ENST00000617024 CUL7Q14999 1698 aa27.17■■□□□ 1.94
SPTSSB-204ENST00000617024 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
SPTSSB-204ENST00000617024 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
SPTSSB-204ENST00000617024 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
SPTSSB-204ENST00000617024 PRG4Q92954 1404 aaPredicted RBP26.97■■□□□ 1.91
SPTSSB-204ENST00000617024 JPH4Q96JJ6 628 aa26.88■■□□□ 1.89
SPTSSB-204ENST00000617024 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
SPTSSB-204ENST00000617024 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
SPTSSB-204ENST00000617024 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.89
SPTSSB-204ENST00000617024 KIF21BO75037 1637 aa26.83■■□□□ 1.88
SPTSSB-204ENST00000617024 DIP2BQ9P265 1576 aa26.82■■□□□ 1.88
SPTSSB-204ENST00000617024 FAM69CQ0P6D2 419 aa26.81■■□□□ 1.88
SPTSSB-204ENST00000617024 MAPKBP1O60336 1514 aa26.8■■□□□ 1.88
SPTSSB-204ENST00000617024 ADCY10Q96PN6 1610 aa26.8■■□□□ 1.88
SPTSSB-204ENST00000617024 UBTFP17480 764 aaKnown RBP26.77■■□□□ 1.88
SPTSSB-204ENST00000617024 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
SPTSSB-204ENST00000617024 IQGAP2Q13576 1575 aa26.71■■□□□ 1.87
SPTSSB-204ENST00000617024 CTTNBP2Q8WZ74 1663 aa26.7■■□□□ 1.86
SPTSSB-204ENST00000617024 TSPOAP1O95153 1857 aa26.69■■□□□ 1.86
SPTSSB-204ENST00000617024 KDM4FA0A1W2PPD8 638 aa26.68■■□□□ 1.86
SPTSSB-204ENST00000617024 NPM1P06748 294 aaKnown RBP eCLIP26.68■■□□□ 1.86
SPTSSB-204ENST00000617024 KDM6BO15054 1643 aa26.68■■□□□ 1.86
SPTSSB-204ENST00000617024 CARMIL2Q6F5E8 1435 aa26.6■■□□□ 1.85
SPTSSB-204ENST00000617024 UGGT2Q9NYU1 1516 aa26.6■■□□□ 1.85
SPTSSB-204ENST00000617024 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.85
SPTSSB-204ENST00000617024 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
SPTSSB-204ENST00000617024 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
SPTSSB-204ENST00000617024 DISP1Q96F81 1524 aa26.51■■□□□ 1.83
SPTSSB-204ENST00000617024 PPRC1Q5VV67 1664 aaKnown RBP26.48■■□□□ 1.83
SPTSSB-204ENST00000617024 P3H3Q8IVL6 736 aa26.48■■□□□ 1.83
SPTSSB-204ENST00000617024 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
SPTSSB-204ENST00000617024 PTPRGP23470 1445 aa26.45■■□□□ 1.82
SPTSSB-204ENST00000617024 KIAA0556O60303 1618 aa26.44■■□□□ 1.82
SPTSSB-204ENST00000617024 ABCC2Q92887 1545 aa26.4■■□□□ 1.82
SPTSSB-204ENST00000617024 GLI2P10070 1586 aa26.38■■□□□ 1.81
SPTSSB-204ENST00000617024 ILDR1Q86SU0 546 aaPredicted RBP26.38■■□□□ 1.81
SPTSSB-204ENST00000617024 ASXL2Q76L83 1435 aa26.38■■□□□ 1.81
SPTSSB-204ENST00000617024 SAMD9Q5K651 1589 aa26.37■■□□□ 1.81
SPTSSB-204ENST00000617024 EFCAB5A4FU69 1503 aa26.35■■□□□ 1.81
SPTSSB-204ENST00000617024 ADGRL1O94910 1474 aa26.32■■□□□ 1.8
SPTSSB-204ENST00000617024 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
SPTSSB-204ENST00000617024 COL17A1Q9UMD9 1497 aaPredicted RBP26.31■■□□□ 1.8
SPTSSB-204ENST00000617024 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
SPTSSB-204ENST00000617024 CLIP1P30622 1438 aa26.3■■□□□ 1.8
SPTSSB-204ENST00000617024 FHOD3Q2V2M9 1422 aa26.3■■□□□ 1.8
SPTSSB-204ENST00000617024 UHRF1BP1LA0JNW5 1464 aa26.3■■□□□ 1.8
SPTSSB-204ENST00000617024 MAP3K4Q9Y6R4 1608 aa26.25■■□□□ 1.79
SPTSSB-204ENST00000617024 CEP162Q5TB80 1403 aa26.25■■□□□ 1.79
SPTSSB-204ENST00000617024 UACAQ9BZF9 1416 aa26.25■■□□□ 1.79
SPTSSB-204ENST00000617024 EPRSP07814 1512 aaKnown RBP26.23■■□□□ 1.79
SPTSSB-204ENST00000617024 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.79
SPTSSB-204ENST00000617024 ZCCHC11Q5TAX3 1644 aaKnown RBP26.18■■□□□ 1.78
SPTSSB-204ENST00000617024 FMN1Q68DA7 1419 aa26.16■■□□□ 1.78
SPTSSB-204ENST00000617024 HECW2Q9P2P5 1572 aa26.16■■□□□ 1.78
SPTSSB-204ENST00000617024 ABCA8O94911 1581 aa26.15■■□□□ 1.78
SPTSSB-204ENST00000617024 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
SPTSSB-204ENST00000617024 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
SPTSSB-204ENST00000617024 RAPGEF6Q8TEU7 1601 aa26.09■■□□□ 1.77
SPTSSB-204ENST00000617024 ARID3CA6NKF2 412 aa26.04■■□□□ 1.76
SPTSSB-204ENST00000617024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
SPTSSB-204ENST00000617024 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
SPTSSB-204ENST00000617024 WDR7Q9Y4E6 1490 aa26.02■■□□□ 1.76
SPTSSB-204ENST00000617024 ATP10BO94823 1461 aa25.99■■□□□ 1.75
SPTSSB-204ENST00000617024 NUP153P49790 1475 aaKnown RBP25.99■■□□□ 1.75
SPTSSB-204ENST00000617024 CASKIN1Q8WXD9 1431 aa25.98■■□□□ 1.75
SPTSSB-204ENST00000617024 CFAP43Q8NDM7 1665 aa25.95■■□□□ 1.74
SPTSSB-204ENST00000617024 HECW1Q76N89 1606 aa25.93■■□□□ 1.74
SPTSSB-204ENST00000617024 MAGI3Q5TCQ9 1506 aa25.93■■□□□ 1.74
SPTSSB-204ENST00000617024 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
SPTSSB-204ENST00000617024 PCF11O94913 1555 aaKnown RBP25.9■■□□□ 1.74
SPTSSB-204ENST00000617024 CD109Q6YHK3 1445 aa25.9■■□□□ 1.74
SPTSSB-204ENST00000617024 VPS8Q8N3P4 1428 aa25.9■■□□□ 1.74
SPTSSB-204ENST00000617024 PLEKHD1A6NEE1 506 aa25.89■■□□□ 1.74
SPTSSB-204ENST00000617024 CDK11AQ9UQ88 783 aaPredicted RBP25.87■■□□□ 1.73
SPTSSB-204ENST00000617024 KCNH8Q96L42 1107 aa25.85■■□□□ 1.73
SPTSSB-204ENST00000617024 CDK13Q14004 1512 aaKnown RBP25.84■■□□□ 1.73
SPTSSB-204ENST00000617024 CCDC18Q5T9S5 1454 aa25.84■■□□□ 1.73
SPTSSB-204ENST00000617024 LRRIQ1Q96JM4 1722 aa25.79■■□□□ 1.72
SPTSSB-204ENST00000617024 APLP2Q06481 763 aa25.76■■□□□ 1.71
SPTSSB-204ENST00000617024 ARAP3Q8WWN8 1544 aa25.74■■□□□ 1.71
SPTSSB-204ENST00000617024 ADAMTSL3P82987 1691 aa25.7■■□□□ 1.7
SPTSSB-204ENST00000617024 TROQ12816 1431 aaPredicted RBP25.69■■□□□ 1.7
SPTSSB-204ENST00000617024 MTUS2Q5JR59 1369 aa25.66■■□□□ 1.7
SPTSSB-204ENST00000617024 PTPRMP28827 1452 aa25.66■■□□□ 1.7
SPTSSB-204ENST00000617024 FBXO41Q8TF61 875 aa25.65■■□□□ 1.7
SPTSSB-204ENST00000617024 ABCA9Q8IUA7 1624 aa25.65■■□□□ 1.7
SPTSSB-204ENST00000617024 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
SPTSSB-204ENST00000617024 TIAM1Q13009 1591 aa25.62■■□□□ 1.69
SPTSSB-204ENST00000617024 FRMPD1Q5SYB0 1578 aa25.59■■□□□ 1.69
SPTSSB-204ENST00000617024 BCORL1Q5H9F3 1711 aa25.58■■□□□ 1.69
SPTSSB-204ENST00000617024 KANK4Q5T7N3 995 aaPredicted RBP25.58■■□□□ 1.69
SPTSSB-204ENST00000617024 RAPGEF3O95398 923 aa25.57■■□□□ 1.68
SPTSSB-204ENST00000617024 MADDQ8WXG6 1647 aa25.56■■□□□ 1.68
SPTSSB-204ENST00000617024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.56■■□□□ 1.68
SPTSSB-204ENST00000617024 KIF14Q15058 1648 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms