RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
UBXN1-218ENST00000616865 CUL7Q14999 1698 aa25.78■■□□□ 1.72
UBXN1-218ENST00000616865 ADCY10Q96PN6 1610 aa25.73■■□□□ 1.71
UBXN1-218ENST00000616865 MAPKBP1O60336 1514 aa25.73■■□□□ 1.71
UBXN1-218ENST00000616865 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
UBXN1-218ENST00000616865 KIAA0586Q9BVV6 1533 aa25.72■■□□□ 1.71
UBXN1-218ENST00000616865 IGF1RP08069 1367 aa25.69■■□□□ 1.7
UBXN1-218ENST00000616865 ABCC10Q5T3U5 1492 aa25.69■■□□□ 1.7
UBXN1-218ENST00000616865 DIP2BQ9P265 1576 aa25.68■■□□□ 1.7
UBXN1-218ENST00000616865 NPM1P06748 294 aaKnown RBP eCLIP25.62■■□□□ 1.69
UBXN1-218ENST00000616865 FAM69CQ0P6D2 419 aa25.59■■□□□ 1.69
UBXN1-218ENST00000616865 CARMIL1Q5VZK9 1371 aa25.54■■□□□ 1.68
UBXN1-218ENST00000616865 IQGAP2Q13576 1575 aa25.49■■□□□ 1.67
UBXN1-218ENST00000616865 KDM6BO15054 1643 aa25.48■■□□□ 1.67
UBXN1-218ENST00000616865 PTPRGP23470 1445 aa25.47■■□□□ 1.67
UBXN1-218ENST00000616865 TSPOAP1O95153 1857 aa25.47■■□□□ 1.67
UBXN1-218ENST00000616865 CARMIL2Q6F5E8 1435 aa25.46■■□□□ 1.67
UBXN1-218ENST00000616865 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
UBXN1-218ENST00000616865 ABCC2Q92887 1545 aa25.42■■□□□ 1.66
UBXN1-218ENST00000616865 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
UBXN1-218ENST00000616865 DISP1Q96F81 1524 aa25.37■■□□□ 1.65
UBXN1-218ENST00000616865 UHRF1BP1LA0JNW5 1464 aa25.36■■□□□ 1.65
UBXN1-218ENST00000616865 PPRC1Q5VV67 1664 aaKnown RBP25.33■■□□□ 1.65
UBXN1-218ENST00000616865 GLI2P10070 1586 aa25.33■■□□□ 1.65
UBXN1-218ENST00000616865 ASXL2Q76L83 1435 aa25.33■■□□□ 1.65
UBXN1-218ENST00000616865 PLB1Q6P1J6 1458 aa25.32■■□□□ 1.64
UBXN1-218ENST00000616865 RAPGEF2Q9Y4G8 1499 aa25.32■■□□□ 1.64
UBXN1-218ENST00000616865 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
UBXN1-218ENST00000616865 UACAQ9BZF9 1416 aa25.3■■□□□ 1.64
UBXN1-218ENST00000616865 KIAA0556O60303 1618 aa25.29■■□□□ 1.64
UBXN1-218ENST00000616865 KDM5BQ9UGL1 1544 aa25.25■■□□□ 1.63
UBXN1-218ENST00000616865 ZCCHC11Q5TAX3 1644 aaKnown RBP25.23■■□□□ 1.63
UBXN1-218ENST00000616865 CTTNBP2Q8WZ74 1663 aa25.23■■□□□ 1.63
UBXN1-218ENST00000616865 MAP3K4Q9Y6R4 1608 aa25.22■■□□□ 1.63
UBXN1-218ENST00000616865 KDM4FA0A1W2PPD8 638 aa25.2■■□□□ 1.62
UBXN1-218ENST00000616865 EPRSP07814 1512 aaKnown RBP25.2■■□□□ 1.62
UBXN1-218ENST00000616865 TEX14Q8IWB6 1497 aa25.11■■□□□ 1.61
UBXN1-218ENST00000616865 COL17A1Q9UMD9 1497 aaPredicted RBP25.09■■□□□ 1.61
UBXN1-218ENST00000616865 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
UBXN1-218ENST00000616865 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
UBXN1-218ENST00000616865 ADGRL1O94910 1474 aa25.04■■□□□ 1.6
UBXN1-218ENST00000616865 ABCA8O94911 1581 aa25.04■■□□□ 1.6
UBXN1-218ENST00000616865 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
UBXN1-218ENST00000616865 CFAP43Q8NDM7 1665 aa25.01■■□□□ 1.59
UBXN1-218ENST00000616865 MAGI3Q5TCQ9 1506 aa24.94■■□□□ 1.58
UBXN1-218ENST00000616865 CD109Q6YHK3 1445 aa24.9■■□□□ 1.58
UBXN1-218ENST00000616865 KCNH8Q96L42 1107 aa24.83■■□□□ 1.57
UBXN1-218ENST00000616865 SAMD9Q5K651 1589 aa24.83■■□□□ 1.57
UBXN1-218ENST00000616865 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
UBXN1-218ENST00000616865 ATP10BO94823 1461 aa24.77■■□□□ 1.56
UBXN1-218ENST00000616865 HECW2Q9P2P5 1572 aa24.77■■□□□ 1.56
UBXN1-218ENST00000616865 KIF21BO75037 1637 aa24.76■■□□□ 1.55
UBXN1-218ENST00000616865 ABCA9Q8IUA7 1624 aa24.76■■□□□ 1.55
UBXN1-218ENST00000616865 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
UBXN1-218ENST00000616865 ARAP3Q8WWN8 1544 aa24.75■■□□□ 1.55
UBXN1-218ENST00000616865 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
UBXN1-218ENST00000616865 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
UBXN1-218ENST00000616865 ARID3CA6NKF2 412 aa24.72■■□□□ 1.55
UBXN1-218ENST00000616865 ILDR1Q86SU0 546 aaPredicted RBP24.72■■□□□ 1.55
UBXN1-218ENST00000616865 CSRNP3Q8WYN3 585 aa24.69■■□□□ 1.54
UBXN1-218ENST00000616865 EEA1Q15075 1411 aa24.64■■□□□ 1.54
UBXN1-218ENST00000616865 PHLDB1Q86UU1 1377 aa24.64■■□□□ 1.53
UBXN1-218ENST00000616865 NUP153P49790 1475 aaKnown RBP24.64■■□□□ 1.53
UBXN1-218ENST00000616865 NEO1Q92859 1461 aa24.62■■□□□ 1.53
UBXN1-218ENST00000616865 FRMPD1Q5SYB0 1578 aa24.59■■□□□ 1.53
UBXN1-218ENST00000616865 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
UBXN1-218ENST00000616865 ADAMTSL3P82987 1691 aa24.56■■□□□ 1.52
UBXN1-218ENST00000616865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
UBXN1-218ENST00000616865 HNRNPUL2Q1KMD3 747 aaKnown RBP24.54■■□□□ 1.52
UBXN1-218ENST00000616865 EFCAB5A4FU69 1503 aa24.52■■□□□ 1.52
UBXN1-218ENST00000616865 RAPGEF3O95398 923 aa24.51■■□□□ 1.51
UBXN1-218ENST00000616865 BCORL1Q5H9F3 1711 aa24.5■■□□□ 1.51
UBXN1-218ENST00000616865 RANGAP1P46060 587 aaPredicted RBP24.49■■□□□ 1.51
UBXN1-218ENST00000616865 PTPRMP28827 1452 aa24.48■■□□□ 1.51
UBXN1-218ENST00000616865 CFAP74Q9C0B2 1584 aa24.48■■□□□ 1.51
UBXN1-218ENST00000616865 RICTORQ6R327 1708 aa24.47■■□□□ 1.51
UBXN1-218ENST00000616865 ARHGEF40Q8TER5 1519 aa24.47■■□□□ 1.51
UBXN1-218ENST00000616865 MADDQ8WXG6 1647 aa24.45■■□□□ 1.5
UBXN1-218ENST00000616865 TTC37Q6PGP7 1564 aa24.45■■□□□ 1.5
UBXN1-218ENST00000616865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.5
UBXN1-218ENST00000616865 DENND4BO75064 1496 aaPredicted RBP24.42■■□□□ 1.5
UBXN1-218ENST00000616865 FANCAO15360 1455 aa24.41■■□□□ 1.5
UBXN1-218ENST00000616865 PLEKHD1A6NEE1 506 aa24.41■■□□□ 1.5
UBXN1-218ENST00000616865 AKNAQ7Z591 1439 aa24.4■■□□□ 1.5
UBXN1-218ENST00000616865 ZMYM4Q5VZL5 1548 aa24.38■■□□□ 1.49
UBXN1-218ENST00000616865 CDK13Q14004 1512 aaKnown RBP24.37■■□□□ 1.49
UBXN1-218ENST00000616865 RIMS1Q86UR5 1692 aaKnown RBP24.35■■□□□ 1.49
UBXN1-218ENST00000616865 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
UBXN1-218ENST00000616865 PCF11O94913 1555 aaKnown RBP24.33■■□□□ 1.49
UBXN1-218ENST00000616865 ZFYVE16Q7Z3T8 1539 aa24.32■■□□□ 1.48
UBXN1-218ENST00000616865 SIGLEC1Q9BZZ2 1709 aa24.31■■□□□ 1.48
UBXN1-218ENST00000616865 HECW1Q76N89 1606 aa24.31■■□□□ 1.48
UBXN1-218ENST00000616865 LMTK3Q96Q04 1460 aa24.29■■□□□ 1.48
UBXN1-218ENST00000616865 MAGI2Q86UL8 1455 aa24.27■■□□□ 1.48
UBXN1-218ENST00000616865 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
UBXN1-218ENST00000616865 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
UBXN1-218ENST00000616865 FMN1Q68DA7 1419 aa24.26■■□□□ 1.47
UBXN1-218ENST00000616865 PLCH2O75038 1416 aa24.25■■□□□ 1.47
UBXN1-218ENST00000616865 POGZQ7Z3K3 1410 aa24.25■■□□□ 1.47
UBXN1-218ENST00000616865 ARHGAP35Q9NRY4 1499 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms