RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
PCDH15-229ENST00000616114 FAM9BQ8IZU0 186 aa12.04□□□□□ -0.48
PCDH15-229ENST00000616114 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
PCDH15-229ENST00000616114 RRP7BPQ9NSQ0 103 aa12.03□□□□□ -0.48
PCDH15-229ENST00000616114 MRS2Q9HD23 443 aa12.02□□□□□ -0.48
PCDH15-229ENST00000616114 TMC1Q8TDI8 760 aa12.01□□□□□ -0.49
PCDH15-229ENST00000616114 ARHGAP35Q9NRY4 1499 aa12□□□□□ -0.49
PCDH15-229ENST00000616114 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
PCDH15-229ENST00000616114 PLEKHD1A6NEE1 506 aa11.98□□□□□ -0.49
PCDH15-229ENST00000616114 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
PCDH15-229ENST00000616114 KANK4Q5T7N3 995 aaPredicted RBP11.96□□□□□ -0.49
PCDH15-229ENST00000616114 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
PCDH15-229ENST00000616114 NEFMP07197 916 aa11.96□□□□□ -0.5
PCDH15-229ENST00000616114 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
PCDH15-229ENST00000616114 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
PCDH15-229ENST00000616114 CCER2I3L3R5 266 aa11.95□□□□□ -0.5
PCDH15-229ENST00000616114 CFDP1Q9UEE9 299 aaPredicted RBP11.94□□□□□ -0.5
PCDH15-229ENST00000616114 CADPSQ9ULU8 1353 aa11.94□□□□□ -0.5
PCDH15-229ENST00000616114 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
PCDH15-229ENST00000616114 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
PCDH15-229ENST00000616114 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
PCDH15-229ENST00000616114 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
PCDH15-229ENST00000616114 RAB3GAP2Q9H2M9 1393 aa11.92□□□□□ -0.5
PCDH15-229ENST00000616114 PDS5BQ9NTI5 1447 aa11.91□□□□□ -0.5
PCDH15-229ENST00000616114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
PCDH15-229ENST00000616114 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
PCDH15-229ENST00000616114 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCDH15-229ENST00000616114 EIF4G1Q04637 1599 aaKnown RBP11.89□□□□□ -0.51
PCDH15-229ENST00000616114 WDR43Q15061 677 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCDH15-229ENST00000616114 KIF21BO75037 1637 aa11.87□□□□□ -0.51
PCDH15-229ENST00000616114 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
PCDH15-229ENST00000616114 DHX57Q6P158 1386 aaKnown RBP11.85□□□□□ -0.51
PCDH15-229ENST00000616114 CDCA8Q53HL2 280 aa11.85□□□□□ -0.51
PCDH15-229ENST00000616114 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
PCDH15-229ENST00000616114 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
PCDH15-229ENST00000616114 CARD11Q9BXL7 1154 aa11.83□□□□□ -0.52
PCDH15-229ENST00000616114 PPP4R2Q9NY27 417 aa11.82□□□□□ -0.52
PCDH15-229ENST00000616114 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
PCDH15-229ENST00000616114 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
PCDH15-229ENST00000616114 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
PCDH15-229ENST00000616114 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
PCDH15-229ENST00000616114 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
PCDH15-229ENST00000616114 IRX6P78412 446 aaPredicted RBP11.8□□□□□ -0.52
PCDH15-229ENST00000616114 ERICH6BQ5W0A0 696 aa11.8□□□□□ -0.52
PCDH15-229ENST00000616114 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
PCDH15-229ENST00000616114 FHOD3Q2V2M9 1422 aa11.79□□□□□ -0.52
PCDH15-229ENST00000616114 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
PCDH15-229ENST00000616114 TDRD9Q8NDG6 1382 aaKnown RBP11.78□□□□□ -0.52
PCDH15-229ENST00000616114 HSPA5P11021 654 aaKnown RBP11.77□□□□□ -0.52
PCDH15-229ENST00000616114 FANCD2Q9BXW9 1451 aa11.77□□□□□ -0.52
PCDH15-229ENST00000616114 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
PCDH15-229ENST00000616114 ANP32EQ9BTT0 268 aa11.76□□□□□ -0.53
PCDH15-229ENST00000616114 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
PCDH15-229ENST00000616114 IGF1RP08069 1367 aa11.75□□□□□ -0.53
PCDH15-229ENST00000616114 MPHOSPH9Q99550 1183 aa11.75□□□□□ -0.53
PCDH15-229ENST00000616114 ESF1Q9H501 851 aaKnown RBP11.75□□□□□ -0.53
PCDH15-229ENST00000616114 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
PCDH15-229ENST00000616114 KNSTRNQ9Y448 316 aa11.75□□□□□ -0.53
PCDH15-229ENST00000616114 CCDC18Q5T9S5 1454 aa11.74□□□□□ -0.53
PCDH15-229ENST00000616114 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
PCDH15-229ENST00000616114 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
PCDH15-229ENST00000616114 SYNJ1O43426 1573 aa11.73□□□□□ -0.53
PCDH15-229ENST00000616114 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
PCDH15-229ENST00000616114 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
PCDH15-229ENST00000616114 TOP2BQ02880 1626 aa11.71□□□□□ -0.54
PCDH15-229ENST00000616114 TMF1P82094 1093 aa11.69□□□□□ -0.54
PCDH15-229ENST00000616114 PKD2Q13563 968 aa11.69□□□□□ -0.54
PCDH15-229ENST00000616114 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
PCDH15-229ENST00000616114 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
PCDH15-229ENST00000616114 CFTRP13569 1480 aa11.68□□□□□ -0.54
PCDH15-229ENST00000616114 CUX1P39880 1505 aa11.68□□□□□ -0.54
PCDH15-229ENST00000616114 RRBP1Q9P2E9 1410 aaKnown RBP11.68□□□□□ -0.54
PCDH15-229ENST00000616114 DCAF11Q8TEB1 546 aa11.68□□□□□ -0.54
PCDH15-229ENST00000616114 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
PCDH15-229ENST00000616114 LRRC9Q6ZRR7 1453 aa11.67□□□□□ -0.54
PCDH15-229ENST00000616114 KANK1Q14678 1352 aa11.66□□□□□ -0.54
PCDH15-229ENST00000616114 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
PCDH15-229ENST00000616114 RALBP1Q15311 655 aa11.66□□□□□ -0.54
PCDH15-229ENST00000616114 ROCK2O75116 1388 aaKnown RBP11.65□□□□□ -0.54
PCDH15-229ENST00000616114 NBR1Q14596 966 aa11.65□□□□□ -0.54
PCDH15-229ENST00000616114 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
PCDH15-229ENST00000616114 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
PCDH15-229ENST00000616114 BECN1Q14457 450 aa11.64□□□□□ -0.55
PCDH15-229ENST00000616114 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
PCDH15-229ENST00000616114 NUP155O75694 1391 aa11.63□□□□□ -0.55
PCDH15-229ENST00000616114 KTN1Q86UP2 1357 aaKnown RBP11.63□□□□□ -0.55
PCDH15-229ENST00000616114 FGD6Q6ZV73 1430 aa11.63□□□□□ -0.55
PCDH15-229ENST00000616114 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
PCDH15-229ENST00000616114 ARAP1Q96P48 1450 aa11.62□□□□□ -0.55
PCDH15-229ENST00000616114 ANP32BQ92688 251 aaKnown RBP11.62□□□□□ -0.55
PCDH15-229ENST00000616114 PPM1GO15355 546 aaPredicted RBP11.62□□□□□ -0.55
PCDH15-229ENST00000616114 FYCO1Q9BQS8 1478 aa11.62□□□□□ -0.55
PCDH15-229ENST00000616114 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
PCDH15-229ENST00000616114 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
PCDH15-229ENST00000616114 FOXD1Q16676 465 aa11.61□□□□□ -0.55
PCDH15-229ENST00000616114 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
PCDH15-229ENST00000616114 RBM19Q9Y4C8 960 aaKnown RBP11.6□□□□□ -0.55
PCDH15-229ENST00000616114 PHLDB1Q86UU1 1377 aa11.59□□□□□ -0.55
PCDH15-229ENST00000616114 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
PCDH15-229ENST00000616114 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms