RNA–Protein interactions for RNA: ENST00000615525.1

NCAM1-223, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5

Gene NCAM1, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-223ENST00000615525 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
NCAM1-223ENST00000615525 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
NCAM1-223ENST00000615525 MSH5O43196 834 aa18.12■□□□□ 0.49
NCAM1-223ENST00000615525 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
NCAM1-223ENST00000615525 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
NCAM1-223ENST00000615525 MAP3K1Q13233 1512 aa18.11■□□□□ 0.49
NCAM1-223ENST00000615525 PBRM1Q86U86 1689 aa18.08■□□□□ 0.48
NCAM1-223ENST00000615525 ERCC6Q03468 1493 aa18.05■□□□□ 0.48
NCAM1-223ENST00000615525 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
NCAM1-223ENST00000615525 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
NCAM1-223ENST00000615525 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
NCAM1-223ENST00000615525 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
NCAM1-223ENST00000615525 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
NCAM1-223ENST00000615525 PPARGC1BQ86YN6 1023 aaKnown RBP17.98■□□□□ 0.47
NCAM1-223ENST00000615525 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
NCAM1-223ENST00000615525 FYCO1Q9BQS8 1478 aa17.95■□□□□ 0.46
NCAM1-223ENST00000615525 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
NCAM1-223ENST00000615525 SAMD9Q5K651 1589 aa17.95■□□□□ 0.46
NCAM1-223ENST00000615525 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
NCAM1-223ENST00000615525 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
NCAM1-223ENST00000615525 CASKIN1Q8WXD9 1431 aa17.9■□□□□ 0.46
NCAM1-223ENST00000615525 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
NCAM1-223ENST00000615525 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
NCAM1-223ENST00000615525 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
NCAM1-223ENST00000615525 RRBP1Q9P2E9 1410 aaKnown RBP17.86■□□□□ 0.45
NCAM1-223ENST00000615525 PCF11O94913 1555 aaKnown RBP17.86■□□□□ 0.45
NCAM1-223ENST00000615525 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
NCAM1-223ENST00000615525 FHOD3Q2V2M9 1422 aa17.81■□□□□ 0.44
NCAM1-223ENST00000615525 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
NCAM1-223ENST00000615525 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
NCAM1-223ENST00000615525 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
NCAM1-223ENST00000615525 KIAA0586Q9BVV6 1533 aa17.8■□□□□ 0.44
NCAM1-223ENST00000615525 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
NCAM1-223ENST00000615525 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
NCAM1-223ENST00000615525 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
NCAM1-223ENST00000615525 SYNJ2O15056 1496 aa17.77■□□□□ 0.44
NCAM1-223ENST00000615525 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.44
NCAM1-223ENST00000615525 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
NCAM1-223ENST00000615525 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
NCAM1-223ENST00000615525 HECW1Q76N89 1606 aa17.73■□□□□ 0.43
NCAM1-223ENST00000615525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.73■□□□□ 0.43
NCAM1-223ENST00000615525 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.42
NCAM1-223ENST00000615525 EHBP1L1Q8N3D4 1523 aa17.69■□□□□ 0.42
NCAM1-223ENST00000615525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
NCAM1-223ENST00000615525 P3H3Q8IVL6 736 aa17.67■□□□□ 0.42
NCAM1-223ENST00000615525 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
NCAM1-223ENST00000615525 NUP160Q12769 1436 aa17.65■□□□□ 0.42
NCAM1-223ENST00000615525 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
NCAM1-223ENST00000615525 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
NCAM1-223ENST00000615525 MTUS2Q5JR59 1369 aa17.64■□□□□ 0.41
NCAM1-223ENST00000615525 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
NCAM1-223ENST00000615525 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
NCAM1-223ENST00000615525 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
NCAM1-223ENST00000615525 LRRIQ1Q96JM4 1722 aa17.59■□□□□ 0.41
NCAM1-223ENST00000615525 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
NCAM1-223ENST00000615525 DISP1Q96F81 1524 aa17.59■□□□□ 0.41
NCAM1-223ENST00000615525 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
NCAM1-223ENST00000615525 EPRSP07814 1512 aaKnown RBP17.57■□□□□ 0.4
NCAM1-223ENST00000615525 RAPGEF6Q8TEU7 1601 aa17.54■□□□□ 0.4
NCAM1-223ENST00000615525 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
NCAM1-223ENST00000615525 FGD6Q6ZV73 1430 aa17.54■□□□□ 0.4
NCAM1-223ENST00000615525 NCOA2Q15596 1464 aa17.53■□□□□ 0.4
NCAM1-223ENST00000615525 MYOM3Q5VTT5 1437 aa17.53■□□□□ 0.4
NCAM1-223ENST00000615525 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
NCAM1-223ENST00000615525 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
NCAM1-223ENST00000615525 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
NCAM1-223ENST00000615525 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
NCAM1-223ENST00000615525 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
NCAM1-223ENST00000615525 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
NCAM1-223ENST00000615525 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
NCAM1-223ENST00000615525 FBLN2P98095 1184 aa17.44■□□□□ 0.38
NCAM1-223ENST00000615525 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
NCAM1-223ENST00000615525 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
NCAM1-223ENST00000615525 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
NCAM1-223ENST00000615525 CHD1O14646 1710 aa17.42■□□□□ 0.38
NCAM1-223ENST00000615525 MAGI3Q5TCQ9 1506 aa17.41■□□□□ 0.38
NCAM1-223ENST00000615525 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
NCAM1-223ENST00000615525 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
NCAM1-223ENST00000615525 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
NCAM1-223ENST00000615525 ADCY10Q96PN6 1610 aa17.39■□□□□ 0.38
NCAM1-223ENST00000615525 CDK13Q14004 1512 aaKnown RBP17.39■□□□□ 0.37
NCAM1-223ENST00000615525 ABCA8O94911 1581 aa17.39■□□□□ 0.37
NCAM1-223ENST00000615525 ITSN2Q9NZM3 1697 aa17.39■□□□□ 0.37
NCAM1-223ENST00000615525 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
NCAM1-223ENST00000615525 HFM1A2PYH4 1435 aa17.37■□□□□ 0.37
NCAM1-223ENST00000615525 ITGAEP38570 1179 aa17.33■□□□□ 0.36
NCAM1-223ENST00000615525 PRG4Q92954 1404 aaPredicted RBP17.32■□□□□ 0.36
NCAM1-223ENST00000615525 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
NCAM1-223ENST00000615525 PLB1Q6P1J6 1458 aa17.31■□□□□ 0.36
NCAM1-223ENST00000615525 GCC2Q8IWJ2 1684 aa17.3■□□□□ 0.36
NCAM1-223ENST00000615525 PTPRGP23470 1445 aa17.3■□□□□ 0.36
NCAM1-223ENST00000615525 KIF14Q15058 1648 aa17.29■□□□□ 0.36
NCAM1-223ENST00000615525 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
NCAM1-223ENST00000615525 DNMT1P26358 1616 aaKnown RBP17.26■□□□□ 0.35
NCAM1-223ENST00000615525 UACAQ9BZF9 1416 aa17.26■□□□□ 0.35
NCAM1-223ENST00000615525 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
NCAM1-223ENST00000615525 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
NCAM1-223ENST00000615525 NAIPQ13075 1403 aa17.23■□□□□ 0.35
NCAM1-223ENST00000615525 MAPKBP1O60336 1514 aa17.23■□□□□ 0.35
NCAM1-223ENST00000615525 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms