RNA–Protein interactions for RNA: ENST00000615459.4

RSPO1-204, Transcript of R-spondin 1, humanhuman

TSL 2 BASIC

Gene RSPO1, Length 2,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-204ENST00000615459 RIMBP3Q9UFD9 1639 aa25.39■■□□□ 1.65
RSPO1-204ENST00000615459 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
RSPO1-204ENST00000615459 JPH4Q96JJ6 628 aa25.35■■□□□ 1.65
RSPO1-204ENST00000615459 EHMT2Q96KQ7 1210 aa25.34■■□□□ 1.65
RSPO1-204ENST00000615459 KIAA0586Q9BVV6 1533 aa25.32■■□□□ 1.64
RSPO1-204ENST00000615459 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
RSPO1-204ENST00000615459 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
RSPO1-204ENST00000615459 PRG4Q92954 1404 aaPredicted RBP25.26■■□□□ 1.63
RSPO1-204ENST00000615459 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
RSPO1-204ENST00000615459 SHROOM2Q13796 1616 aa25.24■■□□□ 1.63
RSPO1-204ENST00000615459 IQGAP2Q13576 1575 aa25.19■■□□□ 1.62
RSPO1-204ENST00000615459 HRCP23327 699 aa25.18■■□□□ 1.62
RSPO1-204ENST00000615459 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.61
RSPO1-204ENST00000615459 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
RSPO1-204ENST00000615459 KIF21BO75037 1637 aa25.12■■□□□ 1.61
RSPO1-204ENST00000615459 CTTNBP2Q8WZ74 1663 aa25.1■■□□□ 1.61
RSPO1-204ENST00000615459 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
RSPO1-204ENST00000615459 CARMIL2Q6F5E8 1435 aa25.05■■□□□ 1.6
RSPO1-204ENST00000615459 GOLGA3Q08378 1498 aa25.04■■□□□ 1.6
RSPO1-204ENST00000615459 DISP1Q96F81 1524 aa25.04■■□□□ 1.6
RSPO1-204ENST00000615459 UGGT2Q9NYU1 1516 aa25.04■■□□□ 1.6
RSPO1-204ENST00000615459 P3H3Q8IVL6 736 aa25.01■■□□□ 1.59
RSPO1-204ENST00000615459 PCGF6Q9BYE7 350 aa25■■□□□ 1.59
RSPO1-204ENST00000615459 PTPRGP23470 1445 aa24.98■■□□□ 1.59
RSPO1-204ENST00000615459 TNIKQ9UKE5 1360 aa24.97■■□□□ 1.59
RSPO1-204ENST00000615459 KIAA0556O60303 1618 aa24.95■■□□□ 1.58
RSPO1-204ENST00000615459 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
RSPO1-204ENST00000615459 SAMD9Q5K651 1589 aa24.82■■□□□ 1.56
RSPO1-204ENST00000615459 FHOD3Q2V2M9 1422 aa24.81■■□□□ 1.56
RSPO1-204ENST00000615459 ADCY10Q96PN6 1610 aa24.81■■□□□ 1.56
RSPO1-204ENST00000615459 UACAQ9BZF9 1416 aa24.79■■□□□ 1.56
RSPO1-204ENST00000615459 PLB1Q6P1J6 1458 aa24.78■■□□□ 1.56
RSPO1-204ENST00000615459 NPM1P06748 294 aaKnown RBP eCLIP24.77■■□□□ 1.56
RSPO1-204ENST00000615459 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
RSPO1-204ENST00000615459 ARHGAP35Q9NRY4 1499 aa24.73■■□□□ 1.55
RSPO1-204ENST00000615459 EFCAB5A4FU69 1503 aa24.72■■□□□ 1.55
RSPO1-204ENST00000615459 ARID3CA6NKF2 412 aa24.72■■□□□ 1.55
RSPO1-204ENST00000615459 ABCC2Q92887 1545 aa24.7■■□□□ 1.55
RSPO1-204ENST00000615459 UHRF1BP1LA0JNW5 1464 aa24.69■■□□□ 1.54
RSPO1-204ENST00000615459 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
RSPO1-204ENST00000615459 ABCA8O94911 1581 aa24.66■■□□□ 1.54
RSPO1-204ENST00000615459 CLIP1P30622 1438 aa24.65■■□□□ 1.54
RSPO1-204ENST00000615459 KDM5BQ9UGL1 1544 aa24.6■■□□□ 1.53
RSPO1-204ENST00000615459 ATP1B4Q9UN42 357 aaPredicted RBP24.6■■□□□ 1.53
RSPO1-204ENST00000615459 CEP162Q5TB80 1403 aa24.58■■□□□ 1.53
RSPO1-204ENST00000615459 RAPGEF6Q8TEU7 1601 aa24.56■■□□□ 1.52
RSPO1-204ENST00000615459 MAPKBP1O60336 1514 aa24.56■■□□□ 1.52
RSPO1-204ENST00000615459 ASXL2Q76L83 1435 aa24.56■■□□□ 1.52
RSPO1-204ENST00000615459 ZCCHC11Q5TAX3 1644 aaKnown RBP24.56■■□□□ 1.52
RSPO1-204ENST00000615459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
RSPO1-204ENST00000615459 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
RSPO1-204ENST00000615459 FMN1Q68DA7 1419 aa24.54■■□□□ 1.52
RSPO1-204ENST00000615459 NUP153P49790 1475 aaKnown RBP24.54■■□□□ 1.52
RSPO1-204ENST00000615459 FAM69CQ0P6D2 419 aa24.53■■□□□ 1.52
RSPO1-204ENST00000615459 ATP10BO94823 1461 aa24.53■■□□□ 1.52
RSPO1-204ENST00000615459 ABCC10Q5T3U5 1492 aa24.47■■□□□ 1.51
RSPO1-204ENST00000615459 KCNH8Q96L42 1107 aa24.47■■□□□ 1.51
RSPO1-204ENST00000615459 TRIM26Q12899 539 aaPredicted RBP24.43■■□□□ 1.5
RSPO1-204ENST00000615459 DIP2BQ9P265 1576 aa24.43■■□□□ 1.5
RSPO1-204ENST00000615459 WDR7Q9Y4E6 1490 aa24.42■■□□□ 1.5
RSPO1-204ENST00000615459 CDK13Q14004 1512 aaKnown RBP24.41■■□□□ 1.5
RSPO1-204ENST00000615459 KIF13AQ9H1H9 1805 aa24.41■■□□□ 1.5
RSPO1-204ENST00000615459 PCF11O94913 1555 aaKnown RBP24.39■■□□□ 1.5
RSPO1-204ENST00000615459 EPRSP07814 1512 aaKnown RBP24.38■■□□□ 1.49
RSPO1-204ENST00000615459 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
RSPO1-204ENST00000615459 HECW1Q76N89 1606 aa24.38■■□□□ 1.49
RSPO1-204ENST00000615459 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
RSPO1-204ENST00000615459 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
RSPO1-204ENST00000615459 LRRIQ1Q96JM4 1722 aa24.29■■□□□ 1.48
RSPO1-204ENST00000615459 GLI2P10070 1586 aa24.27■■□□□ 1.48
RSPO1-204ENST00000615459 TSPOAP1O95153 1857 aa24.27■■□□□ 1.48
RSPO1-204ENST00000615459 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
RSPO1-204ENST00000615459 VPS8Q8N3P4 1428 aa24.24■■□□□ 1.47
RSPO1-204ENST00000615459 CCDC18Q5T9S5 1454 aa24.22■■□□□ 1.47
RSPO1-204ENST00000615459 CD109Q6YHK3 1445 aa24.22■■□□□ 1.47
RSPO1-204ENST00000615459 MAP3K4Q9Y6R4 1608 aa24.19■■□□□ 1.46
RSPO1-204ENST00000615459 MAGI3Q5TCQ9 1506 aa24.17■■□□□ 1.46
RSPO1-204ENST00000615459 TROQ12816 1431 aaPredicted RBP24.17■■□□□ 1.46
RSPO1-204ENST00000615459 PPRC1Q5VV67 1664 aaKnown RBP24.14■■□□□ 1.46
RSPO1-204ENST00000615459 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
RSPO1-204ENST00000615459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.13■■□□□ 1.45
RSPO1-204ENST00000615459 CFAP43Q8NDM7 1665 aa24.12■■□□□ 1.45
RSPO1-204ENST00000615459 KIF14Q15058 1648 aa24.12■■□□□ 1.45
RSPO1-204ENST00000615459 TTC37Q6PGP7 1564 aa24.1■■□□□ 1.45
RSPO1-204ENST00000615459 MTUS2Q5JR59 1369 aa24.09■■□□□ 1.45
RSPO1-204ENST00000615459 TEX14Q8IWB6 1497 aa24.08■■□□□ 1.44
RSPO1-204ENST00000615459 KANK4Q5T7N3 995 aaPredicted RBP24.04■■□□□ 1.44
RSPO1-204ENST00000615459 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
RSPO1-204ENST00000615459 COL17A1Q9UMD9 1497 aaPredicted RBP24.02■■□□□ 1.44
RSPO1-204ENST00000615459 APLP2Q06481 763 aa24.02■■□□□ 1.44
RSPO1-204ENST00000615459 KDM6BO15054 1643 aa24■■□□□ 1.43
RSPO1-204ENST00000615459 PLCH2O75038 1416 aa23.99■■□□□ 1.43
RSPO1-204ENST00000615459 FANCAO15360 1455 aa23.97■■□□□ 1.43
RSPO1-204ENST00000615459 ZEB1P37275 1124 aaPredicted RBP23.96■■□□□ 1.43
RSPO1-204ENST00000615459 EHBP1L1Q8N3D4 1523 aa23.96■■□□□ 1.43
RSPO1-204ENST00000615459 LRRC9Q6ZRR7 1453 aa23.95■■□□□ 1.42
RSPO1-204ENST00000615459 RAPGEF3O95398 923 aa23.93■■□□□ 1.42
RSPO1-204ENST00000615459 EFCAB2Q5VUJ9 269 aa23.93■■□□□ 1.42
RSPO1-204ENST00000615459 AKNAQ7Z591 1439 aa23.92■■□□□ 1.42
RSPO1-204ENST00000615459 NEO1Q92859 1461 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms