RNA–Protein interactions for RNA: ENST00000615296.4

PCSK6-216, Transcript of proprotein convertase subtilisin/kexin type 6, human

TSL 5 BASIC

Gene PCSK6, Length 2,921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCSK6-216	ENST00000615296	ARAP1	Q96P48	1450 aa		33.55	■■■□□ 2.96
PCSK6-216	ENST00000615296	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.49	■■■□□ 2.95
PCSK6-216	ENST00000615296	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.45	■■■□□ 2.94
PCSK6-216	ENST00000615296	NBR1	Q14596	966 aa		33.44	■■■□□ 2.94
PCSK6-216	ENST00000615296	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
PCSK6-216	ENST00000615296	SETD5	Q9C0A6	1442 aa		33.32	■■■□□ 2.92
PCSK6-216	ENST00000615296	PPP4R2	Q9NY27	417 aa		33.3	■■■□□ 2.92
PCSK6-216	ENST00000615296	NOP58	Q9Y2X3	529 aa	Known RBP	33.27	■■■□□ 2.92
PCSK6-216	ENST00000615296	B4GALNT3	Q6L9W6	998 aa		33.26	■■■□□ 2.91
PCSK6-216	ENST00000615296	PAK3	O75914	559 aa	Predicted RBP	33.25	■■■□□ 2.91
PCSK6-216	ENST00000615296	FAM50A	Q14320	339 aa	Known RBP	33.21	■■■□□ 2.91
PCSK6-216	ENST00000615296	TIMELESS	Q9UNS1	1208 aa		33.2	■■■□□ 2.91
PCSK6-216	ENST00000615296	PRX	Q9BXM0	1461 aa		33.18	■■■□□ 2.9
PCSK6-216	ENST00000615296	SALL2	Q9Y467	1007 aa	Predicted RBP	33.16	■■■□□ 2.9
PCSK6-216	ENST00000615296	ERICH6B	Q5W0A0	696 aa		33.15	■■■□□ 2.9
PCSK6-216	ENST00000615296	ERICH3	Q5RHP9	1530 aa		33.13	■■■□□ 2.89
PCSK6-216	ENST00000615296	ARHGAP35	Q9NRY4	1499 aa		33.04	■■■□□ 2.88
PCSK6-216	ENST00000615296	TONSL	Q96HA7	1378 aa		33.01	■■■□□ 2.87
PCSK6-216	ENST00000615296	CCDC136	Q96JN2	1154 aa		33	■■■□□ 2.87
PCSK6-216	ENST00000615296	RTL5	Q5HYW3	569 aa	Predicted RBP	32.99	■■■□□ 2.87
PCSK6-216	ENST00000615296	PHLDB1	Q86UU1	1377 aa		32.99	■■■□□ 2.87
PCSK6-216	ENST00000615296	IL27	Q8NEV9	243 aa		32.98	■■■□□ 2.87
PCSK6-216	ENST00000615296	TOP2B	Q02880	1626 aa		32.97	■■■□□ 2.87
PCSK6-216	ENST00000615296	RTN4	Q9NQC3	1192 aa	Known RBP	32.97	■■■□□ 2.87
PCSK6-216	ENST00000615296	CCDC184	Q52MB2	194 aa		32.96	■■■□□ 2.87
PCSK6-216	ENST00000615296	FAM9B	Q8IZU0	186 aa		32.91	■■■□□ 2.86
PCSK6-216	ENST00000615296	ANP32A	P39687	249 aa	Known RBP	32.87	■■■□□ 2.85
PCSK6-216	ENST00000615296	IPO9	Q96P70	1041 aa	Known RBP	32.86	■■■□□ 2.85
PCSK6-216	ENST00000615296	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.84	■■■□□ 2.85
PCSK6-216	ENST00000615296	UNC13A	Q9UPW8	1703 aa		32.83	■■■□□ 2.85
PCSK6-216	ENST00000615296	TIAM1	Q13009	1591 aa		32.82	■■■□□ 2.84
PCSK6-216	ENST00000615296	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.81	■■■□□ 2.84
PCSK6-216	ENST00000615296	WASHC2A	Q641Q2	1341 aa		32.81	■■■□□ 2.84
PCSK6-216	ENST00000615296	LRRC9	Q6ZRR7	1453 aa		32.8	■■■□□ 2.84
PCSK6-216	ENST00000615296	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.78	■■■□□ 2.84
PCSK6-216	ENST00000615296	PEG3	Q9GZU2	1588 aa		32.76	■■■□□ 2.84
PCSK6-216	ENST00000615296	KIF27	Q86VH2	1401 aa		32.76	■■■□□ 2.83
PCSK6-216	ENST00000615296	MRS2	Q9HD23	443 aa		32.73	■■■□□ 2.83
PCSK6-216	ENST00000615296	HSPA5	P11021	654 aa	Known RBP	32.71	■■■□□ 2.83
PCSK6-216	ENST00000615296	ZBED9	Q6R2W3	1325 aa		32.7	■■■□□ 2.82
PCSK6-216	ENST00000615296	BIVM-ERCC5	R4GMW8	1640 aa		32.69	■■■□□ 2.82
PCSK6-216	ENST00000615296	ATAD2B	Q9ULI0	1458 aa		32.66	■■■□□ 2.82
PCSK6-216	ENST00000615296	FHAD1	B1AJZ9	1412 aa		32.65	■■■□□ 2.82
PCSK6-216	ENST00000615296	MAP3K1	Q13233	1512 aa		32.65	■■■□□ 2.82
PCSK6-216	ENST00000615296	P3H3	Q8IVL6	736 aa		32.64	■■■□□ 2.82
PCSK6-216	ENST00000615296	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.62	■■■□□ 2.81
PCSK6-216	ENST00000615296	NPM2	Q86SE8	214 aa	Known RBP	32.57	■■■□□ 2.81
PCSK6-216	ENST00000615296	AKNA	Q7Z591	1439 aa		32.57	■■■□□ 2.81
PCSK6-216	ENST00000615296	LAS1L	Q9Y4W2	734 aa	Known RBP	32.56	■■■□□ 2.8
PCSK6-216	ENST00000615296	BICRA	Q9NZM4	1560 aa		32.53	■■■□□ 2.8
PCSK6-216	ENST00000615296	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
PCSK6-216	ENST00000615296	NEFM	P07197	916 aa		32.52	■■■□□ 2.8
PCSK6-216	ENST00000615296	CNTLN	Q9NXG0	1405 aa		32.52	■■■□□ 2.8
PCSK6-216	ENST00000615296	CCDC18	Q5T9S5	1454 aa		32.52	■■■□□ 2.8
PCSK6-216	ENST00000615296	C11orf95	C9JLR9	678 aa	Predicted RBP	32.51	■■■□□ 2.79
PCSK6-216	ENST00000615296	CUX1	P39880	1505 aa		32.5	■■■□□ 2.79
PCSK6-216	ENST00000615296	SENP3-EIF4A1	A0A087X0R7	540 aa		32.49	■■■□□ 2.79
PCSK6-216	ENST00000615296	UACA	Q9BZF9	1416 aa		32.47	■■■□□ 2.79
PCSK6-216	ENST00000615296	CNGB1	Q14028	1251 aa	Predicted RBP	32.47	■■■□□ 2.79
PCSK6-216	ENST00000615296	KDM5B	Q9UGL1	1544 aa		32.43	■■■□□ 2.78
PCSK6-216	ENST00000615296	NCOA2	Q15596	1464 aa		32.4	■■■□□ 2.78
PCSK6-216	ENST00000615296	UBE2Q2	Q8WVN8	375 aa		32.38	■■■□□ 2.77
PCSK6-216	ENST00000615296	NUDC	Q9Y266	331 aa		32.37	■■■□□ 2.77
PCSK6-216	ENST00000615296	AQR	O60306	1485 aa	Known RBP eCLIP	32.37	■■■□□ 2.77	6e-7	■■□□□ 11.9
PCSK6-216	ENST00000615296	IGF1R	P08069	1367 aa		32.36	■■■□□ 2.77
PCSK6-216	ENST00000615296	SMG6	Q86US8	1419 aa	Known RBP	32.36	■■■□□ 2.77
PCSK6-216	ENST00000615296	PTPRK	Q15262	1439 aa		32.36	■■■□□ 2.77
PCSK6-216	ENST00000615296	CCDC7	Q96M83	1385 aa		32.34	■■■□□ 2.77
PCSK6-216	ENST00000615296	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.34	■■■□□ 2.77
PCSK6-216	ENST00000615296	BRPF3	Q9ULD4	1205 aa		32.33	■■■□□ 2.77
PCSK6-216	ENST00000615296	USP35	Q9P2H5	1018 aa		32.32	■■■□□ 2.76
PCSK6-216	ENST00000615296	PCF11	O94913	1555 aa	Known RBP	32.32	■■■□□ 2.76
PCSK6-216	ENST00000615296	HFM1	A2PYH4	1435 aa		32.32	■■■□□ 2.76
PCSK6-216	ENST00000615296	RNF123	Q5XPI4	1314 aa		32.3	■■■□□ 2.76
PCSK6-216	ENST00000615296	EIF5B	O60841	1220 aa	Known RBP	32.3	■■■□□ 2.76
PCSK6-216	ENST00000615296	NCAPD3	P42695	1498 aa		32.29	■■■□□ 2.76
PCSK6-216	ENST00000615296	FGD6	Q6ZV73	1430 aa		32.29	■■■□□ 2.76
PCSK6-216	ENST00000615296	WASHC2C	Q9Y4E1	1318 aa		32.28	■■■□□ 2.76
PCSK6-216	ENST00000615296	CARMIL1	Q5VZK9	1371 aa		32.28	■■■□□ 2.76
PCSK6-216	ENST00000615296	CFAP43	Q8NDM7	1665 aa		32.27	■■■□□ 2.76
PCSK6-216	ENST00000615296	NCOA1	Q15788	1441 aa		32.24	■■■□□ 2.75
PCSK6-216	ENST00000615296	NAIP	Q13075	1403 aa		32.24	■■■□□ 2.75
PCSK6-216	ENST00000615296	PTPN23	Q9H3S7	1636 aa		32.23	■■■□□ 2.75
PCSK6-216	ENST00000615296	FHOD3	Q2V2M9	1422 aa		32.23	■■■□□ 2.75
PCSK6-216	ENST00000615296	L3MBTL2	Q969R5	705 aa		32.22	■■■□□ 2.75
PCSK6-216	ENST00000615296	PDE4A	P27815	886 aa		32.21	■■■□□ 2.75
PCSK6-216	ENST00000615296	RRP7BP	Q9NSQ0	103 aa		32.19	■■■□□ 2.74
PCSK6-216	ENST00000615296	PPM1G	O15355	546 aa	Predicted RBP	32.19	■■■□□ 2.74
PCSK6-216	ENST00000615296	KIF7	Q2M1P5	1343 aa		32.17	■■■□□ 2.74
PCSK6-216	ENST00000615296	FMN1	Q68DA7	1419 aa		32.15	■■■□□ 2.74
PCSK6-216	ENST00000615296	CHIC2	Q9UKJ5	165 aa		32.14	■■■□□ 2.74
PCSK6-216	ENST00000615296	TCERG1	O14776	1098 aa	Known RBP	32.13	■■■□□ 2.73
PCSK6-216	ENST00000615296	FOXD1	Q16676	465 aa		32.12	■■■□□ 2.73
PCSK6-216	ENST00000615296	POLR3GL	Q9BT43	218 aa		32.11	■■■□□ 2.73
PCSK6-216	ENST00000615296	GSE1	Q14687	1217 aa		32.11	■■■□□ 2.73
PCSK6-216	ENST00000615296	EXOC6	Q8TAG9	804 aa		32.1	■■■□□ 2.73
PCSK6-216	ENST00000615296	BACH2	Q9BYV9	841 aa		32.1	■■■□□ 2.73
PCSK6-216	ENST00000615296	MTUS2	Q5JR59	1369 aa		32.09	■■■□□ 2.73
PCSK6-216	ENST00000615296	NBPF8	Q3BBV2	869 aa		32.07	■■■□□ 2.72
PCSK6-216	ENST00000615296	FYCO1	Q9BQS8	1478 aa		32.06	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms