RNA–Protein interactions for RNA: ENST00000614929.4

SNX21-213, Transcript of sorting nexin family member 21, humanhuman

TSL 5 BASIC

Gene SNX21, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-213ENST00000614929 JPH4Q96JJ6 628 aa33.68■■■□□ 2.98
SNX21-213ENST00000614929 PRG4Q92954 1404 aaPredicted RBP33.68■■■□□ 2.98
SNX21-213ENST00000614929 KIAA0586Q9BVV6 1533 aa33.58■■■□□ 2.97
SNX21-213ENST00000614929 CARMIL1Q5VZK9 1371 aa33.5■■■□□ 2.95
SNX21-213ENST00000614929 KIF13AQ9H1H9 1805 aa33.37■■■□□ 2.93
SNX21-213ENST00000614929 ADCY10Q96PN6 1610 aa33.34■■■□□ 2.93
SNX21-213ENST00000614929 IQGAP2Q13576 1575 aa33.3■■■□□ 2.92
SNX21-213ENST00000614929 MAPKBP1O60336 1514 aa33.28■■■□□ 2.92
SNX21-213ENST00000614929 RAPGEF2Q9Y4G8 1499 aa33.25■■■□□ 2.91
SNX21-213ENST00000614929 CARMIL2Q6F5E8 1435 aa33.21■■■□□ 2.91
SNX21-213ENST00000614929 NPM1P06748 294 aaKnown RBP eCLIP33.2■■■□□ 2.91
SNX21-213ENST00000614929 ABCC10Q5T3U5 1492 aa33.18■■■□□ 2.9
SNX21-213ENST00000614929 PTPRGP23470 1445 aa33.18■■■□□ 2.9
SNX21-213ENST00000614929 TNIKQ9UKE5 1360 aa33.17■■■□□ 2.9
SNX21-213ENST00000614929 DIP2BQ9P265 1576 aa33.14■■■□□ 2.9
SNX21-213ENST00000614929 DISP1Q96F81 1524 aa33.12■■■□□ 2.89
SNX21-213ENST00000614929 UGGT2Q9NYU1 1516 aa33.12■■■□□ 2.89
SNX21-213ENST00000614929 CTTNBP2Q8WZ74 1663 aa33.06■■■□□ 2.88
SNX21-213ENST00000614929 FAM69CQ0P6D2 419 aa33.05■■■□□ 2.88
SNX21-213ENST00000614929 UHRF1BP1LA0JNW5 1464 aa33.03■■■□□ 2.88
SNX21-213ENST00000614929 ABCC2Q92887 1545 aa33.02■■■□□ 2.88
SNX21-213ENST00000614929 KIAA0556O60303 1618 aa33.01■■■□□ 2.87
SNX21-213ENST00000614929 PRXQ9BXM0 1461 aa32.99■■■□□ 2.87
SNX21-213ENST00000614929 UACAQ9BZF9 1416 aa32.96■■■□□ 2.87
SNX21-213ENST00000614929 TTBK1Q5TCY1 1321 aaPredicted RBP32.96■■■□□ 2.87
SNX21-213ENST00000614929 TSPOAP1O95153 1857 aa32.88■■■□□ 2.85
SNX21-213ENST00000614929 PLB1Q6P1J6 1458 aa32.87■■■□□ 2.85
SNX21-213ENST00000614929 KDM5BQ9UGL1 1544 aa32.87■■■□□ 2.85
SNX21-213ENST00000614929 ASXL2Q76L83 1435 aa32.86■■■□□ 2.85
SNX21-213ENST00000614929 GOLGA3Q08378 1498 aa32.84■■■□□ 2.85
SNX21-213ENST00000614929 GLI2P10070 1586 aa32.83■■■□□ 2.85
SNX21-213ENST00000614929 ZCCHC11Q5TAX3 1644 aaKnown RBP32.8■■■□□ 2.84
SNX21-213ENST00000614929 KDM6BO15054 1643 aa32.77■■■□□ 2.84
SNX21-213ENST00000614929 PPRC1Q5VV67 1664 aaKnown RBP32.74■■■□□ 2.83
SNX21-213ENST00000614929 ABCA8O94911 1581 aa32.7■■■□□ 2.83
SNX21-213ENST00000614929 CSRNP3Q8WYN3 585 aa32.7■■■□□ 2.83
SNX21-213ENST00000614929 EPRSP07814 1512 aaKnown RBP32.69■■■□□ 2.82
SNX21-213ENST00000614929 AEBP2Q6ZN18 517 aaPredicted RBP32.69■■■□□ 2.82
SNX21-213ENST00000614929 EEA1Q15075 1411 aa32.68■■■□□ 2.82
SNX21-213ENST00000614929 MAP3K4Q9Y6R4 1608 aa32.66■■■□□ 2.82
SNX21-213ENST00000614929 WDR7Q9Y4E6 1490 aa32.6■■■□□ 2.81
SNX21-213ENST00000614929 SAMD9Q5K651 1589 aa32.58■■■□□ 2.81
SNX21-213ENST00000614929 TEX14Q8IWB6 1497 aa32.5■■■□□ 2.79
SNX21-213ENST00000614929 CFAP43Q8NDM7 1665 aa32.46■■■□□ 2.79
SNX21-213ENST00000614929 KIF21BO75037 1637 aa32.44■■■□□ 2.78
SNX21-213ENST00000614929 P3H3Q8IVL6 736 aa32.42■■■□□ 2.78
SNX21-213ENST00000614929 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
SNX21-213ENST00000614929 COL17A1Q9UMD9 1497 aaPredicted RBP32.42■■■□□ 2.78
SNX21-213ENST00000614929 ATP10BO94823 1461 aa32.39■■■□□ 2.78
SNX21-213ENST00000614929 RAPGEF6Q8TEU7 1601 aa32.38■■■□□ 2.77
SNX21-213ENST00000614929 MAGI3Q5TCQ9 1506 aa32.38■■■□□ 2.77
SNX21-213ENST00000614929 CD109Q6YHK3 1445 aa32.34■■■□□ 2.77
SNX21-213ENST00000614929 KCNH8Q96L42 1107 aa32.31■■■□□ 2.76
SNX21-213ENST00000614929 KDM4FA0A1W2PPD8 638 aa32.29■■■□□ 2.76
SNX21-213ENST00000614929 EFCAB5A4FU69 1503 aa32.27■■■□□ 2.76
SNX21-213ENST00000614929 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
SNX21-213ENST00000614929 FHOD3Q2V2M9 1422 aa32.25■■■□□ 2.75
SNX21-213ENST00000614929 ABCA9Q8IUA7 1624 aa32.24■■■□□ 2.75
SNX21-213ENST00000614929 NUP153P49790 1475 aaKnown RBP32.23■■■□□ 2.75
SNX21-213ENST00000614929 ARID3CA6NKF2 412 aa32.22■■■□□ 2.75
SNX21-213ENST00000614929 RANGAP1P46060 587 aaPredicted RBP32.16■■■□□ 2.74
SNX21-213ENST00000614929 ARAP3Q8WWN8 1544 aa32.13■■■□□ 2.73
SNX21-213ENST00000614929 ADGRL1O94910 1474 aa32.11■■■□□ 2.73
SNX21-213ENST00000614929 PHLDB1Q86UU1 1377 aa32.07■■■□□ 2.73
SNX21-213ENST00000614929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.05■■■□□ 2.72
SNX21-213ENST00000614929 HNRNPUL2Q1KMD3 747 aaKnown RBP32.05■■■□□ 2.72
SNX21-213ENST00000614929 UBTFP17480 764 aaKnown RBP32.02■■■□□ 2.72
SNX21-213ENST00000614929 NEO1Q92859 1461 aa32.02■■■□□ 2.72
SNX21-213ENST00000614929 PLEKHD1A6NEE1 506 aa31.98■■■□□ 2.71
SNX21-213ENST00000614929 ARHGAP35Q9NRY4 1499 aa31.97■■■□□ 2.71
SNX21-213ENST00000614929 FMN1Q68DA7 1419 aa31.94■■■□□ 2.7
SNX21-213ENST00000614929 CDK13Q14004 1512 aaKnown RBP31.91■■■□□ 2.7
SNX21-213ENST00000614929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.91■■■□□ 2.7
SNX21-213ENST00000614929 EHMT2Q96KQ7 1210 aa31.91■■■□□ 2.7
SNX21-213ENST00000614929 HECW1Q76N89 1606 aa31.9■■■□□ 2.7
SNX21-213ENST00000614929 FRMPD1Q5SYB0 1578 aa31.88■■■□□ 2.69
SNX21-213ENST00000614929 TTC37Q6PGP7 1564 aa31.87■■■□□ 2.69
SNX21-213ENST00000614929 CFAP74Q9C0B2 1584 aa31.86■■■□□ 2.69
SNX21-213ENST00000614929 RAPGEF3O95398 923 aa31.82■■■□□ 2.68
SNX21-213ENST00000614929 RICTORQ6R327 1708 aa31.81■■■□□ 2.68
SNX21-213ENST00000614929 FANCAO15360 1455 aa31.8■■■□□ 2.68
SNX21-213ENST00000614929 AKNAQ7Z591 1439 aa31.78■■■□□ 2.68
SNX21-213ENST00000614929 LRRIQ1Q96JM4 1722 aa31.76■■■□□ 2.67
SNX21-213ENST00000614929 DENND4BO75064 1496 aaPredicted RBP31.75■■■□□ 2.67
SNX21-213ENST00000614929 PLCH2O75038 1416 aa31.7■■■□□ 2.67
SNX21-213ENST00000614929 ADAMTSL3P82987 1691 aa31.7■■■□□ 2.66
SNX21-213ENST00000614929 ARHGEF40Q8TER5 1519 aa31.7■■■□□ 2.66
SNX21-213ENST00000614929 MYO5CQ9NQX4 1742 aa31.69■■■□□ 2.66
SNX21-213ENST00000614929 ATP1B4Q9UN42 357 aaPredicted RBP31.69■■■□□ 2.66
SNX21-213ENST00000614929 CDK11AQ9UQ88 783 aaPredicted RBP31.69■■■□□ 2.66
SNX21-213ENST00000614929 ZMYM4Q5VZL5 1548 aa31.69■■■□□ 2.66
SNX21-213ENST00000614929 KIF14Q15058 1648 aa31.66■■■□□ 2.66
SNX21-213ENST00000614929 TROQ12816 1431 aaPredicted RBP31.66■■■□□ 2.66
SNX21-213ENST00000614929 BCORL1Q5H9F3 1711 aa31.64■■■□□ 2.66
SNX21-213ENST00000614929 PCF11O94913 1555 aaKnown RBP31.63■■■□□ 2.65
SNX21-213ENST00000614929 HECW2Q9P2P5 1572 aa31.63■■■□□ 2.65
SNX21-213ENST00000614929 CASKIN1Q8WXD9 1431 aa31.62■■■□□ 2.65
SNX21-213ENST00000614929 CCDC18Q5T9S5 1454 aa31.59■■■□□ 2.65
SNX21-213ENST00000614929 MAGI2Q86UL8 1455 aa31.59■■■□□ 2.65
SNX21-213ENST00000614929 CLIP1P30622 1438 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms