RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.2
CDH5-208ENST00000614547 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
CDH5-208ENST00000614547 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
CDH5-208ENST00000614547 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
CDH5-208ENST00000614547 RAB3GAP2Q9H2M9 1393 aa16.23■□□□□ 0.19
CDH5-208ENST00000614547 DEKP35659 375 aaKnown RBP16.22■□□□□ 0.19
CDH5-208ENST00000614547 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
CDH5-208ENST00000614547 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
CDH5-208ENST00000614547 SALL2Q9Y467 1007 aaPredicted RBP16.21■□□□□ 0.19
CDH5-208ENST00000614547 UNC13AQ9UPW8 1703 aa16.21■□□□□ 0.19
CDH5-208ENST00000614547 MRS2Q9HD23 443 aa16.21■□□□□ 0.18
CDH5-208ENST00000614547 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
CDH5-208ENST00000614547 MSH5O43196 834 aa16.17■□□□□ 0.18
CDH5-208ENST00000614547 ANP32AP39687 249 aaKnown RBP16.17■□□□□ 0.18
CDH5-208ENST00000614547 CCDC136Q96JN2 1154 aa16.14■□□□□ 0.17
CDH5-208ENST00000614547 RRP7BPQ9NSQ0 103 aa16.11■□□□□ 0.17
CDH5-208ENST00000614547 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
CDH5-208ENST00000614547 PPP4R2Q9NY27 417 aa16.09■□□□□ 0.17
CDH5-208ENST00000614547 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
CDH5-208ENST00000614547 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
CDH5-208ENST00000614547 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.16
CDH5-208ENST00000614547 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.16
CDH5-208ENST00000614547 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
CDH5-208ENST00000614547 EIF5BO60841 1220 aaKnown RBP16.06■□□□□ 0.16
CDH5-208ENST00000614547 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
CDH5-208ENST00000614547 LAS1LQ9Y4W2 734 aaKnown RBP16.06■□□□□ 0.16
CDH5-208ENST00000614547 NESP48681 1621 aa16.06■□□□□ 0.16
CDH5-208ENST00000614547 SETD5Q9C0A6 1442 aa16.05■□□□□ 0.16
CDH5-208ENST00000614547 KIF21BO75037 1637 aa16.02■□□□□ 0.16
CDH5-208ENST00000614547 EIF4G2P78344 907 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDH5-208ENST00000614547 FOXD1Q16676 465 aa16■□□□□ 0.15
CDH5-208ENST00000614547 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
CDH5-208ENST00000614547 CUX2O14529 1486 aa15.99■□□□□ 0.15
CDH5-208ENST00000614547 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
CDH5-208ENST00000614547 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
CDH5-208ENST00000614547 MYT1LQ9UL68 1186 aa15.95■□□□□ 0.14
CDH5-208ENST00000614547 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
CDH5-208ENST00000614547 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
CDH5-208ENST00000614547 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
CDH5-208ENST00000614547 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
CDH5-208ENST00000614547 MTUS2Q5JR59 1369 aa15.92■□□□□ 0.14
CDH5-208ENST00000614547 TMC1Q8TDI8 760 aa15.92■□□□□ 0.14
CDH5-208ENST00000614547 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
CDH5-208ENST00000614547 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
CDH5-208ENST00000614547 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
CDH5-208ENST00000614547 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
CDH5-208ENST00000614547 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
CDH5-208ENST00000614547 NEFMP07197 916 aa15.89■□□□□ 0.13
CDH5-208ENST00000614547 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
CDH5-208ENST00000614547 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
CDH5-208ENST00000614547 ARXQ96QS3 562 aa15.87■□□□□ 0.13
CDH5-208ENST00000614547 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
CDH5-208ENST00000614547 CARMIL1Q5VZK9 1371 aa15.85■□□□□ 0.13
CDH5-208ENST00000614547 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
CDH5-208ENST00000614547 KDM2AQ9Y2K7 1162 aa15.84■□□□□ 0.13
CDH5-208ENST00000614547 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
CDH5-208ENST00000614547 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.12
CDH5-208ENST00000614547 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
CDH5-208ENST00000614547 RRBP1Q9P2E9 1410 aaKnown RBP15.8■□□□□ 0.12
CDH5-208ENST00000614547 IL27Q8NEV9 243 aa15.8■□□□□ 0.12
CDH5-208ENST00000614547 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
CDH5-208ENST00000614547 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
CDH5-208ENST00000614547 IPO9Q96P70 1041 aaKnown RBP15.78■□□□□ 0.12
CDH5-208ENST00000614547 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
CDH5-208ENST00000614547 PRKCSHP14314 528 aaPredicted RBP15.78■□□□□ 0.12
CDH5-208ENST00000614547 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.11
CDH5-208ENST00000614547 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
CDH5-208ENST00000614547 FHOD3Q2V2M9 1422 aa15.74■□□□□ 0.11
CDH5-208ENST00000614547 IGF1RP08069 1367 aa15.73■□□□□ 0.11
CDH5-208ENST00000614547 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
CDH5-208ENST00000614547 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
CDH5-208ENST00000614547 CUX1P39880 1505 aa15.72■□□□□ 0.11
CDH5-208ENST00000614547 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
CDH5-208ENST00000614547 CFTRP13569 1480 aa15.71■□□□□ 0.1
CDH5-208ENST00000614547 ERICH6BQ5W0A0 696 aa15.7■□□□□ 0.1
CDH5-208ENST00000614547 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
CDH5-208ENST00000614547 AKNAQ7Z591 1439 aa15.67■□□□□ 0.1
CDH5-208ENST00000614547 MPHOSPH9Q99550 1183 aa15.67■□□□□ 0.1
CDH5-208ENST00000614547 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
CDH5-208ENST00000614547 C11orf95C9JLR9 678 aaPredicted RBP15.67■□□□□ 0.1
CDH5-208ENST00000614547 EXOC6Q8TAG9 804 aa15.66■□□□□ 0.1
CDH5-208ENST00000614547 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
CDH5-208ENST00000614547 ZBED9Q6R2W3 1325 aa15.66■□□□□ 0.1
CDH5-208ENST00000614547 RGS3P49796 1198 aa15.65■□□□□ 0.1
CDH5-208ENST00000614547 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
CDH5-208ENST00000614547 PLIN1O60240 522 aa15.65■□□□□ 0.1
CDH5-208ENST00000614547 SKAP1Q86WV1 359 aa15.64■□□□□ 0.09
CDH5-208ENST00000614547 CCDC18Q5T9S5 1454 aa15.63■□□□□ 0.09
CDH5-208ENST00000614547 PRXQ9BXM0 1461 aa15.63■□□□□ 0.09
CDH5-208ENST00000614547 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
CDH5-208ENST00000614547 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
CDH5-208ENST00000614547 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
CDH5-208ENST00000614547 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
CDH5-208ENST00000614547 RGL3Q3MIN7 710 aa15.6■□□□□ 0.09
CDH5-208ENST00000614547 PDE4AP27815 886 aa15.6■□□□□ 0.09
CDH5-208ENST00000614547 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
CDH5-208ENST00000614547 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
CDH5-208ENST00000614547 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
CDH5-208ENST00000614547 BRPF3Q9ULD4 1205 aa15.58■□□□□ 0.08
CDH5-208ENST00000614547 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms