RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 NUP160Q12769 1436 aa12.81□□□□□ -0.36
TARDBP-216ENST00000614494 PLPPR3Q6T4P5 718 aa12.77□□□□□ -0.37
TARDBP-216ENST00000614494 SHROOM2Q13796 1616 aa12.75□□□□□ -0.37
TARDBP-216ENST00000614494 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
TARDBP-216ENST00000614494 KIF27Q86VH2 1401 aa12.68□□□□□ -0.38
TARDBP-216ENST00000614494 CUL7Q14999 1698 aa12.67□□□□□ -0.38
TARDBP-216ENST00000614494 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
TARDBP-216ENST00000614494 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
TARDBP-216ENST00000614494 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
TARDBP-216ENST00000614494 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
TARDBP-216ENST00000614494 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
TARDBP-216ENST00000614494 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
TARDBP-216ENST00000614494 MAPKBP1O60336 1514 aa12.58□□□□□ -0.4
TARDBP-216ENST00000614494 IGF1RP08069 1367 aa12.57□□□□□ -0.4
TARDBP-216ENST00000614494 PPP6R1Q9UPN7 881 aa12.57□□□□□ -0.4
TARDBP-216ENST00000614494 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
TARDBP-216ENST00000614494 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
TARDBP-216ENST00000614494 ADRA2BP18089 450 aa12.52□□□□□ -0.41
TARDBP-216ENST00000614494 CARMIL1Q5VZK9 1371 aa12.52□□□□□ -0.41
TARDBP-216ENST00000614494 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
TARDBP-216ENST00000614494 KIF13AQ9H1H9 1805 aa12.48□□□□□ -0.41
TARDBP-216ENST00000614494 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
TARDBP-216ENST00000614494 PTPRGP23470 1445 aa12.47□□□□□ -0.41
TARDBP-216ENST00000614494 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
TARDBP-216ENST00000614494 DIP2BQ9P265 1576 aa12.47□□□□□ -0.41
TARDBP-216ENST00000614494 FAM69CQ0P6D2 419 aa12.45□□□□□ -0.42
TARDBP-216ENST00000614494 UHRF1BP1LA0JNW5 1464 aa12.45□□□□□ -0.42
TARDBP-216ENST00000614494 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
TARDBP-216ENST00000614494 ABCC2Q92887 1545 aa12.44□□□□□ -0.42
TARDBP-216ENST00000614494 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
TARDBP-216ENST00000614494 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
TARDBP-216ENST00000614494 UACAQ9BZF9 1416 aa12.39□□□□□ -0.43
TARDBP-216ENST00000614494 GOLGA3Q08378 1498 aa12.39□□□□□ -0.43
TARDBP-216ENST00000614494 GLI2P10070 1586 aa12.39□□□□□ -0.43
TARDBP-216ENST00000614494 KDM6BO15054 1643 aa12.38□□□□□ -0.43
TARDBP-216ENST00000614494 FAM9AQ8IZU1 332 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-216ENST00000614494 DISP1Q96F81 1524 aa12.37□□□□□ -0.43
TARDBP-216ENST00000614494 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
TARDBP-216ENST00000614494 ASXL2Q76L83 1435 aa12.36□□□□□ -0.43
TARDBP-216ENST00000614494 KIAA0556O60303 1618 aa12.35□□□□□ -0.43
TARDBP-216ENST00000614494 TEX14Q8IWB6 1497 aa12.34□□□□□ -0.43
TARDBP-216ENST00000614494 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
TARDBP-216ENST00000614494 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
TARDBP-216ENST00000614494 EPRSP07814 1512 aaKnown RBP12.28□□□□□ -0.44
TARDBP-216ENST00000614494 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.44
TARDBP-216ENST00000614494 ZCCHC11Q5TAX3 1644 aaKnown RBP12.27□□□□□ -0.44
TARDBP-216ENST00000614494 MAP3K4Q9Y6R4 1608 aa12.27□□□□□ -0.44
TARDBP-216ENST00000614494 EEA1Q15075 1411 aa12.27□□□□□ -0.45
TARDBP-216ENST00000614494 TTBK1Q5TCY1 1321 aaPredicted RBP12.26□□□□□ -0.45
TARDBP-216ENST00000614494 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
TARDBP-216ENST00000614494 ABCA8O94911 1581 aa12.22□□□□□ -0.45
TARDBP-216ENST00000614494 PPRC1Q5VV67 1664 aaKnown RBP12.22□□□□□ -0.45
TARDBP-216ENST00000614494 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
TARDBP-216ENST00000614494 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.45
TARDBP-216ENST00000614494 PHLDB1Q86UU1 1377 aa12.19□□□□□ -0.46
TARDBP-216ENST00000614494 CD109Q6YHK3 1445 aa12.17□□□□□ -0.46
TARDBP-216ENST00000614494 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
TARDBP-216ENST00000614494 SAMD9Q5K651 1589 aa12.16□□□□□ -0.46
TARDBP-216ENST00000614494 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
TARDBP-216ENST00000614494 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
TARDBP-216ENST00000614494 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
TARDBP-216ENST00000614494 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
TARDBP-216ENST00000614494 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
TARDBP-216ENST00000614494 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
TARDBP-216ENST00000614494 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
TARDBP-216ENST00000614494 NEO1Q92859 1461 aa12.09□□□□□ -0.47
TARDBP-216ENST00000614494 ATP10BO94823 1461 aa12.08□□□□□ -0.47
TARDBP-216ENST00000614494 KIF21BO75037 1637 aa12.08□□□□□ -0.48
TARDBP-216ENST00000614494 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
TARDBP-216ENST00000614494 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
TARDBP-216ENST00000614494 NUP153P49790 1475 aaKnown RBP12.03□□□□□ -0.48
TARDBP-216ENST00000614494 PLEKHD1A6NEE1 506 aa12.02□□□□□ -0.49
TARDBP-216ENST00000614494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
TARDBP-216ENST00000614494 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
TARDBP-216ENST00000614494 P3H3Q8IVL6 736 aa12.01□□□□□ -0.49
TARDBP-216ENST00000614494 FMN1Q68DA7 1419 aa12.01□□□□□ -0.49
TARDBP-216ENST00000614494 FHOD3Q2V2M9 1422 aa11.99□□□□□ -0.49
TARDBP-216ENST00000614494 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
TARDBP-216ENST00000614494 DENND4BO75064 1496 aaPredicted RBP11.96□□□□□ -0.49
TARDBP-216ENST00000614494 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.49
TARDBP-216ENST00000614494 HECW1Q76N89 1606 aa11.96□□□□□ -0.5
TARDBP-216ENST00000614494 HECW2Q9P2P5 1572 aa11.96□□□□□ -0.5
TARDBP-216ENST00000614494 FANCAO15360 1455 aa11.95□□□□□ -0.5
TARDBP-216ENST00000614494 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
TARDBP-216ENST00000614494 ARHGEF40Q8TER5 1519 aa11.95□□□□□ -0.5
TARDBP-216ENST00000614494 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
TARDBP-216ENST00000614494 ZMYM4Q5VZL5 1548 aa11.94□□□□□ -0.5
TARDBP-216ENST00000614494 CACNB1Q02641 598 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-216ENST00000614494 AKNAQ7Z591 1439 aa11.93□□□□□ -0.5
TARDBP-216ENST00000614494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.92□□□□□ -0.5
TARDBP-216ENST00000614494 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
TARDBP-216ENST00000614494 CLIP1P30622 1438 aa11.92□□□□□ -0.5
TARDBP-216ENST00000614494 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
TARDBP-216ENST00000614494 ADAMTSL3P82987 1691 aa11.91□□□□□ -0.5
TARDBP-216ENST00000614494 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
TARDBP-216ENST00000614494 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
TARDBP-216ENST00000614494 PTPRMP28827 1452 aa11.9□□□□□ -0.5
TARDBP-216ENST00000614494 PLCH2O75038 1416 aa11.9□□□□□ -0.5
TARDBP-216ENST00000614494 RAPGEF3O95398 923 aa11.9□□□□□ -0.5
TARDBP-216ENST00000614494 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms