RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-208ENST00000614402 IGF1RP08069 1367 aa35.75■■■■□ 3.31
PMPCA-208ENST00000614402 CUL7Q14999 1698 aa35.71■■■■□ 3.31
PMPCA-208ENST00000614402 KIAA0586Q9BVV6 1533 aa35.62■■■■□ 3.29
PMPCA-208ENST00000614402 CARMIL1Q5VZK9 1371 aa35.49■■■■□ 3.27
PMPCA-208ENST00000614402 KIF13AQ9H1H9 1805 aa35.48■■■■□ 3.27
PMPCA-208ENST00000614402 ADCY10Q96PN6 1610 aa35.44■■■■□ 3.26
PMPCA-208ENST00000614402 MAPKBP1O60336 1514 aa35.39■■■■□ 3.26
PMPCA-208ENST00000614402 ABCC10Q5T3U5 1492 aa35.32■■■■□ 3.24
PMPCA-208ENST00000614402 IQGAP2Q13576 1575 aa35.29■■■■□ 3.24
PMPCA-208ENST00000614402 NPM1P06748 294 aaKnown RBP eCLIP35.28■■■■□ 3.24
PMPCA-208ENST00000614402 DIP2BQ9P265 1576 aa35.26■■■■□ 3.24
PMPCA-208ENST00000614402 PTPRGP23470 1445 aa35.23■■■■□ 3.23
PMPCA-208ENST00000614402 CARMIL2Q6F5E8 1435 aa35.21■■■■□ 3.23
PMPCA-208ENST00000614402 FAM69CQ0P6D2 419 aa35.2■■■■□ 3.23
PMPCA-208ENST00000614402 TNIKQ9UKE5 1360 aa35.19■■■■□ 3.22
PMPCA-208ENST00000614402 RAPGEF2Q9Y4G8 1499 aa35.19■■■■□ 3.22
PMPCA-208ENST00000614402 DISP1Q96F81 1524 aa35.14■■■■□ 3.22
PMPCA-208ENST00000614402 UGGT2Q9NYU1 1516 aa35.1■■■■□ 3.21
PMPCA-208ENST00000614402 ABCC2Q92887 1545 aa35.09■■■■□ 3.21
PMPCA-208ENST00000614402 UHRF1BP1LA0JNW5 1464 aa35.05■■■■□ 3.2
PMPCA-208ENST00000614402 TTBK1Q5TCY1 1321 aaPredicted RBP35.04■■■■□ 3.2
PMPCA-208ENST00000614402 AEBP2Q6ZN18 517 aaPredicted RBP35.01■■■■□ 3.2
PMPCA-208ENST00000614402 KIAA0556O60303 1618 aa34.99■■■■□ 3.19
PMPCA-208ENST00000614402 UACAQ9BZF9 1416 aa34.98■■■■□ 3.19
PMPCA-208ENST00000614402 ASXL2Q76L83 1435 aa34.94■■■■□ 3.18
PMPCA-208ENST00000614402 CTTNBP2Q8WZ74 1663 aa34.93■■■■□ 3.18
PMPCA-208ENST00000614402 TSPOAP1O95153 1857 aa34.92■■■■□ 3.18
PMPCA-208ENST00000614402 PLB1Q6P1J6 1458 aa34.91■■■■□ 3.18
PMPCA-208ENST00000614402 KDM6BO15054 1643 aa34.89■■■■□ 3.18
PMPCA-208ENST00000614402 KDM5BQ9UGL1 1544 aa34.89■■■■□ 3.18
PMPCA-208ENST00000614402 PRXQ9BXM0 1461 aa34.89■■■■□ 3.18
PMPCA-208ENST00000614402 GLI2P10070 1586 aa34.88■■■■□ 3.17
PMPCA-208ENST00000614402 PPRC1Q5VV67 1664 aaKnown RBP34.81■■■■□ 3.16
PMPCA-208ENST00000614402 ZCCHC11Q5TAX3 1644 aaKnown RBP34.81■■■■□ 3.16
PMPCA-208ENST00000614402 GOLGA3Q08378 1498 aa34.76■■■■□ 3.15
PMPCA-208ENST00000614402 EPRSP07814 1512 aaKnown RBP34.75■■■■□ 3.15
PMPCA-208ENST00000614402 MAP3K4Q9Y6R4 1608 aa34.7■■■■□ 3.14
PMPCA-208ENST00000614402 ABCA8O94911 1581 aa34.67■■■■□ 3.14
PMPCA-208ENST00000614402 WDR7Q9Y4E6 1490 aa34.63■■■■□ 3.13
PMPCA-208ENST00000614402 TEX14Q8IWB6 1497 aa34.54■■■■□ 3.12
PMPCA-208ENST00000614402 COL17A1Q9UMD9 1497 aaPredicted RBP34.54■■■■□ 3.12
PMPCA-208ENST00000614402 CSRNP3Q8WYN3 585 aa34.53■■■■□ 3.12
PMPCA-208ENST00000614402 KDM4FA0A1W2PPD8 638 aa34.5■■■■□ 3.11
PMPCA-208ENST00000614402 SAMD9Q5K651 1589 aa34.47■■■■□ 3.11
PMPCA-208ENST00000614402 EEA1Q15075 1411 aa34.46■■■■□ 3.11
PMPCA-208ENST00000614402 CFAP43Q8NDM7 1665 aa34.43■■■■□ 3.1
PMPCA-208ENST00000614402 MAGI3Q5TCQ9 1506 aa34.4■■■■□ 3.1
PMPCA-208ENST00000614402 P3H3Q8IVL6 736 aa34.37■■■■□ 3.09
PMPCA-208ENST00000614402 CD109Q6YHK3 1445 aa34.37■■■■□ 3.09
PMPCA-208ENST00000614402 ATP10BO94823 1461 aa34.34■■■■□ 3.09
PMPCA-208ENST00000614402 KCNH8Q96L42 1107 aa34.33■■■■□ 3.09
PMPCA-208ENST00000614402 FAM9AQ8IZU1 332 aaPredicted RBP34.28■■■■□ 3.08
PMPCA-208ENST00000614402 RAPGEF6Q8TEU7 1601 aa34.28■■■■□ 3.08
PMPCA-208ENST00000614402 ADGRL1O94910 1474 aa34.27■■■■□ 3.08
PMPCA-208ENST00000614402 ARID3CA6NKF2 412 aa34.24■■■■□ 3.07
PMPCA-208ENST00000614402 KIF21BO75037 1637 aa34.22■■■■□ 3.07
PMPCA-208ENST00000614402 ABCA9Q8IUA7 1624 aa34.19■■■■□ 3.06
PMPCA-208ENST00000614402 NUP153P49790 1475 aaKnown RBP34.18■■■■□ 3.06
PMPCA-208ENST00000614402 FHOD3Q2V2M9 1422 aa34.17■■■■□ 3.06
PMPCA-208ENST00000614402 ARAP3Q8WWN8 1544 aa34.13■■■■□ 3.05
PMPCA-208ENST00000614402 EFCAB5A4FU69 1503 aa34.1■■■■□ 3.05
PMPCA-208ENST00000614402 RANGAP1P46060 587 aaPredicted RBP34.09■■■■□ 3.05
PMPCA-208ENST00000614402 PHLDB1Q86UU1 1377 aa34.02■■■■□ 3.04
PMPCA-208ENST00000614402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.99■■■■□ 3.03
PMPCA-208ENST00000614402 HNRNPUL2Q1KMD3 747 aaKnown RBP33.99■■■■□ 3.03
PMPCA-208ENST00000614402 NEO1Q92859 1461 aa33.99■■■■□ 3.03
PMPCA-208ENST00000614402 CHIC1Q5VXU3 224 aa33.94■■■■□ 3.02
PMPCA-208ENST00000614402 FRMPD1Q5SYB0 1578 aa33.89■■■■□ 3.02
PMPCA-208ENST00000614402 PLEKHD1A6NEE1 506 aa33.87■■■■□ 3.01
PMPCA-208ENST00000614402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.84■■■■□ 3.01
PMPCA-208ENST00000614402 RAPGEF3O95398 923 aa33.84■■■■□ 3.01
PMPCA-208ENST00000614402 CDK13Q14004 1512 aaKnown RBP33.82■■■■□ 3
PMPCA-208ENST00000614402 ARHGAP35Q9NRY4 1499 aa33.81■■■■□ 3
PMPCA-208ENST00000614402 TTC37Q6PGP7 1564 aa33.81■■■■□ 3
PMPCA-208ENST00000614402 UBTFP17480 764 aaKnown RBP33.8■■■■□ 3
PMPCA-208ENST00000614402 HECW2Q9P2P5 1572 aa33.79■■■■□ 3
PMPCA-208ENST00000614402 EHMT2Q96KQ7 1210 aa33.77■■■■□ 3
PMPCA-208ENST00000614402 FMN1Q68DA7 1419 aa33.77■■■■□ 3
PMPCA-208ENST00000614402 CFAP74Q9C0B2 1584 aa33.77■■■■□ 3
PMPCA-208ENST00000614402 FANCAO15360 1455 aa33.75■■■□□ 2.99
PMPCA-208ENST00000614402 RICTORQ6R327 1708 aa33.74■■■□□ 2.99
PMPCA-208ENST00000614402 HECW1Q76N89 1606 aa33.74■■■□□ 2.99
PMPCA-208ENST00000614402 AKNAQ7Z591 1439 aa33.73■■■□□ 2.99
PMPCA-208ENST00000614402 ADAMTSL3P82987 1691 aa33.72■■■□□ 2.99
PMPCA-208ENST00000614402 DENND4BO75064 1496 aaPredicted RBP33.71■■■□□ 2.99
PMPCA-208ENST00000614402 ARHGEF40Q8TER5 1519 aa33.69■■■□□ 2.98
PMPCA-208ENST00000614402 BCORL1Q5H9F3 1711 aa33.64■■■□□ 2.98
PMPCA-208ENST00000614402 ZMYM4Q5VZL5 1548 aa33.63■■■□□ 2.97
PMPCA-208ENST00000614402 PLCH2O75038 1416 aa33.62■■■□□ 2.97
PMPCA-208ENST00000614402 PTPRMP28827 1452 aa33.6■■■□□ 2.97
PMPCA-208ENST00000614402 LRRIQ1Q96JM4 1722 aa33.56■■■□□ 2.96
PMPCA-208ENST00000614402 ATP1B4Q9UN42 357 aaPredicted RBP33.55■■■□□ 2.96
PMPCA-208ENST00000614402 KIF14Q15058 1648 aa33.54■■■□□ 2.96
PMPCA-208ENST00000614402 MADDQ8WXG6 1647 aa33.54■■■□□ 2.96
PMPCA-208ENST00000614402 MYO5CQ9NQX4 1742 aa33.53■■■□□ 2.96
PMPCA-208ENST00000614402 ZFYVE16Q7Z3T8 1539 aa33.52■■■□□ 2.96
PMPCA-208ENST00000614402 TROQ12816 1431 aaPredicted RBP33.52■■■□□ 2.96
PMPCA-208ENST00000614402 POGZQ7Z3K3 1410 aa33.52■■■□□ 2.96
PMPCA-208ENST00000614402 MAGI2Q86UL8 1455 aa33.51■■■□□ 2.96
PMPCA-208ENST00000614402 CDK11AQ9UQ88 783 aaPredicted RBP33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms