RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
CHTOP-207ENST00000614256 CEP162Q5TB80 1403 aa30.14■■■□□ 2.42
CHTOP-207ENST00000614256 NUP160Q12769 1436 aa30.09■■■□□ 2.41
CHTOP-207ENST00000614256 RANGAP1P46060 587 aaPredicted RBP30.08■■■□□ 2.41
CHTOP-207ENST00000614256 IQGAP2Q13576 1575 aa30.04■■■□□ 2.4
CHTOP-207ENST00000614256 KIAA0586Q9BVV6 1533 aa30.02■■■□□ 2.4
CHTOP-207ENST00000614256 CLIP1P30622 1438 aa30.02■■■□□ 2.4
CHTOP-207ENST00000614256 ARHGAP35Q9NRY4 1499 aa29.92■■■□□ 2.38
CHTOP-207ENST00000614256 SAMD9Q5K651 1589 aa29.88■■■□□ 2.37
CHTOP-207ENST00000614256 CLASP1Q7Z460 1538 aa29.87■■■□□ 2.37
CHTOP-207ENST00000614256 UGGT2Q9NYU1 1516 aa29.87■■■□□ 2.37
CHTOP-207ENST00000614256 ARAP1Q96P48 1450 aa29.85■■■□□ 2.37
CHTOP-207ENST00000614256 EFCAB5A4FU69 1503 aa29.85■■■□□ 2.37
CHTOP-207ENST00000614256 SHROOM2Q13796 1616 aa29.8■■■□□ 2.36
CHTOP-207ENST00000614256 P3H3Q8IVL6 736 aa29.8■■■□□ 2.36
CHTOP-207ENST00000614256 JPH4Q96JJ6 628 aa29.78■■■□□ 2.36
CHTOP-207ENST00000614256 DISP1Q96F81 1524 aa29.78■■■□□ 2.36
CHTOP-207ENST00000614256 FHOD3Q2V2M9 1422 aa29.76■■■□□ 2.35
CHTOP-207ENST00000614256 KIAA0556O60303 1618 aa29.76■■■□□ 2.35
CHTOP-207ENST00000614256 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
CHTOP-207ENST00000614256 VPS8Q8N3P4 1428 aa29.68■■■□□ 2.34
CHTOP-207ENST00000614256 PRG4Q92954 1404 aaPredicted RBP29.67■■■□□ 2.34
CHTOP-207ENST00000614256 ERCC6L2Q5T890 1561 aa29.66■■■□□ 2.34
CHTOP-207ENST00000614256 CARMIL2Q6F5E8 1435 aa29.62■■■□□ 2.33
CHTOP-207ENST00000614256 PCF11O94913 1555 aaKnown RBP29.56■■■□□ 2.32
CHTOP-207ENST00000614256 FMN1Q68DA7 1419 aa29.54■■■□□ 2.32
CHTOP-207ENST00000614256 TTBK1Q5TCY1 1321 aaPredicted RBP29.51■■■□□ 2.32
CHTOP-207ENST00000614256 CASKIN1Q8WXD9 1431 aa29.45■■■□□ 2.3
CHTOP-207ENST00000614256 LRRIQ1Q96JM4 1722 aa29.44■■■□□ 2.3
CHTOP-207ENST00000614256 FYCO1Q9BQS8 1478 aa29.43■■■□□ 2.3
CHTOP-207ENST00000614256 RAPGEF6Q8TEU7 1601 aa29.4■■■□□ 2.3
CHTOP-207ENST00000614256 PTPRGP23470 1445 aa29.4■■■□□ 2.3
CHTOP-207ENST00000614256 PLB1Q6P1J6 1458 aa29.39■■■□□ 2.3
CHTOP-207ENST00000614256 ABCA8O94911 1581 aa29.36■■■□□ 2.29
CHTOP-207ENST00000614256 HECW1Q76N89 1606 aa29.35■■■□□ 2.29
CHTOP-207ENST00000614256 ATP1B4Q9UN42 357 aaPredicted RBP29.35■■■□□ 2.29
CHTOP-207ENST00000614256 ARHGEF11O15085 1522 aa29.33■■■□□ 2.29
CHTOP-207ENST00000614256 PPARGC1BQ86YN6 1023 aaKnown RBP29.31■■■□□ 2.28
CHTOP-207ENST00000614256 CFAP43Q8NDM7 1665 aa29.31■■■□□ 2.28
CHTOP-207ENST00000614256 NUP153P49790 1475 aaKnown RBP29.3■■■□□ 2.28
CHTOP-207ENST00000614256 TIAM1Q13009 1591 aa29.3■■■□□ 2.28
CHTOP-207ENST00000614256 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
CHTOP-207ENST00000614256 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
CHTOP-207ENST00000614256 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
CHTOP-207ENST00000614256 EPRSP07814 1512 aaKnown RBP29.25■■■□□ 2.27
CHTOP-207ENST00000614256 APLP2Q06481 763 aa29.25■■■□□ 2.27
CHTOP-207ENST00000614256 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
CHTOP-207ENST00000614256 CDK13Q14004 1512 aaKnown RBP29.24■■■□□ 2.27
CHTOP-207ENST00000614256 UACAQ9BZF9 1416 aa29.24■■■□□ 2.27
CHTOP-207ENST00000614256 ARID3CA6NKF2 412 aa29.23■■■□□ 2.27
CHTOP-207ENST00000614256 ABCC2Q92887 1545 aa29.2■■■□□ 2.26
CHTOP-207ENST00000614256 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.26
CHTOP-207ENST00000614256 KANK4Q5T7N3 995 aaPredicted RBP29.2■■■□□ 2.26
CHTOP-207ENST00000614256 ADCY10Q96PN6 1610 aa29.16■■■□□ 2.26
CHTOP-207ENST00000614256 UHRF1BP1LA0JNW5 1464 aa29.14■■■□□ 2.26
CHTOP-207ENST00000614256 LRRC9Q6ZRR7 1453 aa29.13■■■□□ 2.25
CHTOP-207ENST00000614256 MAGI3Q5TCQ9 1506 aa29.13■■■□□ 2.25
CHTOP-207ENST00000614256 ATP10BO94823 1461 aa29.12■■■□□ 2.25
CHTOP-207ENST00000614256 ZCCHC11Q5TAX3 1644 aaKnown RBP29.06■■■□□ 2.24
CHTOP-207ENST00000614256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.04■■■□□ 2.24
CHTOP-207ENST00000614256 HNRNPUL2Q1KMD3 747 aaKnown RBP29.04■■■□□ 2.24
CHTOP-207ENST00000614256 KDM5BQ9UGL1 1544 aa29.03■■■□□ 2.24
CHTOP-207ENST00000614256 EHBP1L1Q8N3D4 1523 aa29.02■■■□□ 2.24
CHTOP-207ENST00000614256 MTUS2Q5JR59 1369 aa29.02■■■□□ 2.24
CHTOP-207ENST00000614256 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
CHTOP-207ENST00000614256 DNAJC5Q9H3Z4 198 aa28.96■■■□□ 2.23
CHTOP-207ENST00000614256 SUPT6HQ7KZ85 1726 aaKnown RBP28.94■■■□□ 2.22
CHTOP-207ENST00000614256 TROQ12816 1431 aaPredicted RBP28.92■■■□□ 2.22
CHTOP-207ENST00000614256 CDK11AQ9UQ88 783 aaPredicted RBP28.92■■■□□ 2.22
CHTOP-207ENST00000614256 KIF14Q15058 1648 aa28.9■■■□□ 2.22
CHTOP-207ENST00000614256 NCOA2Q15596 1464 aa28.88■■■□□ 2.21
CHTOP-207ENST00000614256 PLEKHD1A6NEE1 506 aa28.87■■■□□ 2.21
CHTOP-207ENST00000614256 PHLDB1Q86UU1 1377 aa28.85■■■□□ 2.21
CHTOP-207ENST00000614256 NPM1P06748 294 aaKnown RBP eCLIP28.78■■■□□ 2.2
CHTOP-207ENST00000614256 ASXL2Q76L83 1435 aa28.77■■■□□ 2.2
CHTOP-207ENST00000614256 TRIM26Q12899 539 aaPredicted RBP28.77■■■□□ 2.2
CHTOP-207ENST00000614256 WDR7Q9Y4E6 1490 aa28.76■■■□□ 2.2
CHTOP-207ENST00000614256 ABCC10Q5T3U5 1492 aa28.75■■■□□ 2.19
CHTOP-207ENST00000614256 TTC37Q6PGP7 1564 aa28.72■■■□□ 2.19
CHTOP-207ENST00000614256 MYOM3Q5VTT5 1437 aa28.72■■■□□ 2.19
CHTOP-207ENST00000614256 CDC42BPAQ5VT25 1732 aa28.71■■■□□ 2.19
CHTOP-207ENST00000614256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.71■■■□□ 2.19
CHTOP-207ENST00000614256 KCNH8Q96L42 1107 aa28.71■■■□□ 2.19
CHTOP-207ENST00000614256 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.18
CHTOP-207ENST00000614256 MAPKBP1O60336 1514 aa28.7■■■□□ 2.18
CHTOP-207ENST00000614256 FGD6Q6ZV73 1430 aa28.67■■■□□ 2.18
CHTOP-207ENST00000614256 CCNB3Q8WWL7 1395 aa28.67■■■□□ 2.18
CHTOP-207ENST00000614256 ITSN2Q9NZM3 1697 aa28.66■■■□□ 2.18
CHTOP-207ENST00000614256 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
CHTOP-207ENST00000614256 GPATCH8Q9UKJ3 1502 aaKnown RBP28.65■■■□□ 2.18
CHTOP-207ENST00000614256 MYO5CQ9NQX4 1742 aa28.62■■■□□ 2.17
CHTOP-207ENST00000614256 CDC42BPBQ9Y5S2 1711 aa28.62■■■□□ 2.17
CHTOP-207ENST00000614256 PREX2Q70Z35 1606 aa28.6■■■□□ 2.17
CHTOP-207ENST00000614256 ABCA9Q8IUA7 1624 aa28.6■■■□□ 2.17
CHTOP-207ENST00000614256 PTPN23Q9H3S7 1636 aa28.6■■■□□ 2.17
CHTOP-207ENST00000614256 MIA2Q96PC5 1412 aa28.57■■■□□ 2.16
CHTOP-207ENST00000614256 TCOF1Q13428 1488 aaKnown RBP28.53■■■□□ 2.16
CHTOP-207ENST00000614256 FAM50AQ14320 339 aaKnown RBP28.52■■■□□ 2.16
CHTOP-207ENST00000614256 CFDP1Q9UEE9 299 aaPredicted RBP28.5■■■□□ 2.15
CHTOP-207ENST00000614256 DIP2BQ9P265 1576 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms