RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 RUSC2Q8N2Y8 1516 aa31.2■■■□□ 2.59
SMN2-213ENST00000614240 IGF1RP08069 1367 aa31.18■■■□□ 2.58
SMN2-213ENST00000614240 NPM1P06748 294 aaKnown RBP eCLIP31.18■■■□□ 2.58
SMN2-213ENST00000614240 KIAA0586Q9BVV6 1533 aa31.11■■■□□ 2.57
SMN2-213ENST00000614240 CUL7Q14999 1698 aa31.07■■■□□ 2.56
SMN2-213ENST00000614240 FAM69CQ0P6D2 419 aa31.05■■■□□ 2.56
SMN2-213ENST00000614240 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
SMN2-213ENST00000614240 KIF13AQ9H1H9 1805 aa31■■■□□ 2.55
SMN2-213ENST00000614240 TTBK1Q5TCY1 1321 aaPredicted RBP30.96■■■□□ 2.55
SMN2-213ENST00000614240 ABCC10Q5T3U5 1492 aa30.95■■■□□ 2.55
SMN2-213ENST00000614240 ADCY10Q96PN6 1610 aa30.95■■■□□ 2.54
SMN2-213ENST00000614240 MAPKBP1O60336 1514 aa30.93■■■□□ 2.54
SMN2-213ENST00000614240 PTPRGP23470 1445 aa30.9■■■□□ 2.54
SMN2-213ENST00000614240 CARMIL2Q6F5E8 1435 aa30.87■■■□□ 2.53
SMN2-213ENST00000614240 DIP2BQ9P265 1576 aa30.83■■■□□ 2.53
SMN2-213ENST00000614240 TNIKQ9UKE5 1360 aa30.82■■■□□ 2.52
SMN2-213ENST00000614240 IQGAP2Q13576 1575 aa30.77■■■□□ 2.52
SMN2-213ENST00000614240 RAPGEF2Q9Y4G8 1499 aa30.7■■■□□ 2.5
SMN2-213ENST00000614240 ABCC2Q92887 1545 aa30.68■■■□□ 2.5
SMN2-213ENST00000614240 TSPOAP1O95153 1857 aa30.64■■■□□ 2.5
SMN2-213ENST00000614240 UACAQ9BZF9 1416 aa30.64■■■□□ 2.49
SMN2-213ENST00000614240 KDM6BO15054 1643 aa30.63■■■□□ 2.49
SMN2-213ENST00000614240 ASXL2Q76L83 1435 aa30.62■■■□□ 2.49
SMN2-213ENST00000614240 DISP1Q96F81 1524 aa30.62■■■□□ 2.49
SMN2-213ENST00000614240 UHRF1BP1LA0JNW5 1464 aa30.6■■■□□ 2.49
SMN2-213ENST00000614240 PLB1Q6P1J6 1458 aa30.6■■■□□ 2.49
SMN2-213ENST00000614240 UGGT2Q9NYU1 1516 aa30.56■■■□□ 2.48
SMN2-213ENST00000614240 KIAA0556O60303 1618 aa30.47■■■□□ 2.47
SMN2-213ENST00000614240 GLI2P10070 1586 aa30.47■■■□□ 2.47
SMN2-213ENST00000614240 KDM5BQ9UGL1 1544 aa30.46■■■□□ 2.47
SMN2-213ENST00000614240 KDM4FA0A1W2PPD8 638 aa30.41■■■□□ 2.46
SMN2-213ENST00000614240 EPRSP07814 1512 aaKnown RBP30.4■■■□□ 2.46
SMN2-213ENST00000614240 GOLGA3Q08378 1498 aa30.38■■■□□ 2.45
SMN2-213ENST00000614240 ZCCHC11Q5TAX3 1644 aaKnown RBP30.37■■■□□ 2.45
SMN2-213ENST00000614240 PPRC1Q5VV67 1664 aaKnown RBP30.35■■■□□ 2.45
SMN2-213ENST00000614240 CTTNBP2Q8WZ74 1663 aa30.35■■■□□ 2.45
SMN2-213ENST00000614240 TEX14Q8IWB6 1497 aa30.31■■■□□ 2.44
SMN2-213ENST00000614240 PRXQ9BXM0 1461 aa30.3■■■□□ 2.44
SMN2-213ENST00000614240 FAM9AQ8IZU1 332 aaPredicted RBP30.29■■■□□ 2.44
SMN2-213ENST00000614240 WDR7Q9Y4E6 1490 aa30.29■■■□□ 2.44
SMN2-213ENST00000614240 MAP3K4Q9Y6R4 1608 aa30.29■■■□□ 2.44
SMN2-213ENST00000614240 KCNH8Q96L42 1107 aa30.26■■■□□ 2.43
SMN2-213ENST00000614240 COL17A1Q9UMD9 1497 aaPredicted RBP30.24■■■□□ 2.43
SMN2-213ENST00000614240 ABCA8O94911 1581 aa30.2■■■□□ 2.43
SMN2-213ENST00000614240 P3H3Q8IVL6 736 aa30.19■■■□□ 2.42
SMN2-213ENST00000614240 CD109Q6YHK3 1445 aa30.15■■■□□ 2.42
SMN2-213ENST00000614240 ARID3CA6NKF2 412 aa30.15■■■□□ 2.42
SMN2-213ENST00000614240 CSRNP3Q8WYN3 585 aa30.15■■■□□ 2.42
SMN2-213ENST00000614240 ADGRL1O94910 1474 aa30.13■■■□□ 2.41
SMN2-213ENST00000614240 MAGI3Q5TCQ9 1506 aa30.07■■■□□ 2.4
SMN2-213ENST00000614240 CFAP43Q8NDM7 1665 aa30.05■■■□□ 2.4
SMN2-213ENST00000614240 RANGAP1P46060 587 aaPredicted RBP30.01■■■□□ 2.39
SMN2-213ENST00000614240 ATP10BO94823 1461 aa30■■■□□ 2.39
SMN2-213ENST00000614240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.99■■■□□ 2.39
SMN2-213ENST00000614240 HNRNPUL2Q1KMD3 747 aaKnown RBP29.99■■■□□ 2.39
SMN2-213ENST00000614240 EEA1Q15075 1411 aa29.95■■■□□ 2.38
SMN2-213ENST00000614240 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
SMN2-213ENST00000614240 RAPGEF6Q8TEU7 1601 aa29.87■■■□□ 2.37
SMN2-213ENST00000614240 ARAP3Q8WWN8 1544 aa29.84■■■□□ 2.37
SMN2-213ENST00000614240 PHLDB1Q86UU1 1377 aa29.83■■■□□ 2.37
SMN2-213ENST00000614240 FHOD3Q2V2M9 1422 aa29.81■■■□□ 2.36
SMN2-213ENST00000614240 ABCA9Q8IUA7 1624 aa29.81■■■□□ 2.36
SMN2-213ENST00000614240 NUP153P49790 1475 aaKnown RBP29.77■■■□□ 2.36
SMN2-213ENST00000614240 PLEKHD1A6NEE1 506 aa29.76■■■□□ 2.35
SMN2-213ENST00000614240 RAPGEF3O95398 923 aa29.76■■■□□ 2.35
SMN2-213ENST00000614240 KIF21BO75037 1637 aa29.74■■■□□ 2.35
SMN2-213ENST00000614240 NEO1Q92859 1461 aa29.73■■■□□ 2.35
SMN2-213ENST00000614240 HECW2Q9P2P5 1572 aa29.73■■■□□ 2.35
SMN2-213ENST00000614240 EHMT2Q96KQ7 1210 aa29.68■■■□□ 2.34
SMN2-213ENST00000614240 EFCAB5A4FU69 1503 aa29.65■■■□□ 2.34
SMN2-213ENST00000614240 ILDR1Q86SU0 546 aaPredicted RBP29.64■■■□□ 2.34
SMN2-213ENST00000614240 UBTFP17480 764 aaKnown RBP29.63■■■□□ 2.33
SMN2-213ENST00000614240 ARID4BQ4LE39 1312 aaPredicted RBP29.63■■■□□ 2.33
SMN2-213ENST00000614240 ATP1B4Q9UN42 357 aaPredicted RBP29.57■■■□□ 2.32
SMN2-213ENST00000614240 DENND4BO75064 1496 aaPredicted RBP29.55■■■□□ 2.32
SMN2-213ENST00000614240 AKNAQ7Z591 1439 aa29.54■■■□□ 2.32
SMN2-213ENST00000614240 FRMPD1Q5SYB0 1578 aa29.53■■■□□ 2.32
SMN2-213ENST00000614240 FANCAO15360 1455 aa29.53■■■□□ 2.32
SMN2-213ENST00000614240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.51■■■□□ 2.32
SMN2-213ENST00000614240 PTPRMP28827 1452 aa29.51■■■□□ 2.31
SMN2-213ENST00000614240 CDK13Q14004 1512 aaKnown RBP29.49■■■□□ 2.31
SMN2-213ENST00000614240 ADAMTSL3P82987 1691 aa29.48■■■□□ 2.31
SMN2-213ENST00000614240 CHIC1Q5VXU3 224 aa29.47■■■□□ 2.31
SMN2-213ENST00000614240 CFAP74Q9C0B2 1584 aa29.47■■■□□ 2.31
SMN2-213ENST00000614240 TTC37Q6PGP7 1564 aa29.45■■■□□ 2.31
SMN2-213ENST00000614240 FMN1Q68DA7 1419 aa29.45■■■□□ 2.3
SMN2-213ENST00000614240 CDK11AQ9UQ88 783 aaPredicted RBP29.42■■■□□ 2.3
SMN2-213ENST00000614240 BCORL1Q5H9F3 1711 aa29.42■■■□□ 2.3
SMN2-213ENST00000614240 ARHGEF40Q8TER5 1519 aa29.41■■■□□ 2.3
SMN2-213ENST00000614240 RICTORQ6R327 1708 aa29.4■■■□□ 2.3
SMN2-213ENST00000614240 MADDQ8WXG6 1647 aa29.38■■■□□ 2.29
SMN2-213ENST00000614240 PLCH2O75038 1416 aa29.37■■■□□ 2.29
SMN2-213ENST00000614240 ARHGAP35Q9NRY4 1499 aa29.37■■■□□ 2.29
SMN2-213ENST00000614240 HECW1Q76N89 1606 aa29.37■■■□□ 2.29
SMN2-213ENST00000614240 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
SMN2-213ENST00000614240 SCAPERQ9BY12 1400 aa29.36■■■□□ 2.29
SMN2-213ENST00000614240 EFCAB2Q5VUJ9 269 aa29.34■■■□□ 2.29
SMN2-213ENST00000614240 PLPPR3Q6T4P5 718 aa29.34■■■□□ 2.29
SMN2-213ENST00000614240 ZFYVE16Q7Z3T8 1539 aa29.34■■■□□ 2.29
SMN2-213ENST00000614240 ZMYM4Q5VZL5 1548 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms