RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 CDK11BP21127 795 aaKnown RBP9.13□□□□□ -0.95
CLCN3-211ENST00000613795 DDX10Q13206 875 aaKnown RBP9.12□□□□□ -0.95
CLCN3-211ENST00000613795 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
CLCN3-211ENST00000613795 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
CLCN3-211ENST00000613795 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
CLCN3-211ENST00000613795 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
CLCN3-211ENST00000613795 RBM19Q9Y4C8 960 aaKnown RBP9.1□□□□□ -0.95
CLCN3-211ENST00000613795 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-211ENST00000613795 L1TD1Q5T7N2 865 aaKnown RBP9.08□□□□□ -0.96
CLCN3-211ENST00000613795 ARXQ96QS3 562 aa9.08□□□□□ -0.96
CLCN3-211ENST00000613795 P3H3Q8IVL6 736 aa9.08□□□□□ -0.96
CLCN3-211ENST00000613795 FAM9BQ8IZU0 186 aa9.08□□□□□ -0.96
CLCN3-211ENST00000613795 GOLGA3Q08378 1498 aa9.07□□□□□ -0.96
CLCN3-211ENST00000613795 GOLGA6L22H0YM25 854 aa9.06□□□□□ -0.96
CLCN3-211ENST00000613795 STAG3Q9UJ98 1225 aa9.06□□□□□ -0.96
CLCN3-211ENST00000613795 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
CLCN3-211ENST00000613795 TSPY4P0CV99 314 aa9.05□□□□□ -0.96
CLCN3-211ENST00000613795 TSPY10P0CW01 314 aa9.05□□□□□ -0.96
CLCN3-211ENST00000613795 TSHZ2Q9NRE2 1034 aa9.05□□□□□ -0.96
CLCN3-211ENST00000613795 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
CLCN3-211ENST00000613795 IRX6P78412 446 aaPredicted RBP9.04□□□□□ -0.96
CLCN3-211ENST00000613795 RSPH6AQ9H0K4 717 aa9.03□□□□□ -0.96
CLCN3-211ENST00000613795 CLIP1P30622 1438 aa9.03□□□□□ -0.96
CLCN3-211ENST00000613795 MRS2Q9HD23 443 aa9.02□□□□□ -0.96
CLCN3-211ENST00000613795 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.97
CLCN3-211ENST00000613795 LAS1LQ9Y4W2 734 aaKnown RBP9.01□□□□□ -0.97
CLCN3-211ENST00000613795 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
CLCN3-211ENST00000613795 BAZ1AQ9NRL2 1556 aaPredicted RBP9□□□□□ -0.97
CLCN3-211ENST00000613795 TMC1Q8TDI8 760 aa9□□□□□ -0.97
CLCN3-211ENST00000613795 KIF27Q86VH2 1401 aa9□□□□□ -0.97
CLCN3-211ENST00000613795 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
CLCN3-211ENST00000613795 PTMAP06454 111 aaKnown RBP8.98□□□□□ -0.97
CLCN3-211ENST00000613795 DNTTIP2Q5QJE6 756 aaKnown RBP8.98□□□□□ -0.97
CLCN3-211ENST00000613795 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-211ENST00000613795 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
CLCN3-211ENST00000613795 WDR43Q15061 677 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLCN3-211ENST00000613795 WRNQ14191 1432 aaPredicted RBP eCLIP8.97□□□□□ -0.97
CLCN3-211ENST00000613795 PNNQ9H307 717 aaKnown RBP8.97□□□□□ -0.97
CLCN3-211ENST00000613795 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.98
CLCN3-211ENST00000613795 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
CLCN3-211ENST00000613795 TNIKQ9UKE5 1360 aa8.95□□□□□ -0.98
CLCN3-211ENST00000613795 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
CLCN3-211ENST00000613795 ARID3CA6NKF2 412 aa8.95□□□□□ -0.98
CLCN3-211ENST00000613795 KCNA4P22459 653 aa8.95□□□□□ -0.98
CLCN3-211ENST00000613795 MSNP26038 577 aaKnown RBP8.95□□□□□ -0.98
CLCN3-211ENST00000613795 PLEKHD1A6NEE1 506 aa8.94□□□□□ -0.98
CLCN3-211ENST00000613795 HSP90AA2PQ14568 343 aaPredicted RBP8.93□□□□□ -0.98
CLCN3-211ENST00000613795 CCER2I3L3R5 266 aa8.93□□□□□ -0.98
CLCN3-211ENST00000613795 TIMELESSQ9UNS1 1208 aa8.93□□□□□ -0.98
CLCN3-211ENST00000613795 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLCN3-211ENST00000613795 FHAD1B1AJZ9 1412 aa8.92□□□□□ -0.98
CLCN3-211ENST00000613795 MYH16Q9H6N6 1097 aa8.92□□□□□ -0.98
CLCN3-211ENST00000613795 CHAF1AQ13111 956 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-211ENST00000613795 CEP162Q5TB80 1403 aa8.91□□□□□ -0.98
CLCN3-211ENST00000613795 PTMSP20962 102 aa8.91□□□□□ -0.98
CLCN3-211ENST00000613795 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
CLCN3-211ENST00000613795 IPO9Q96P70 1041 aaKnown RBP8.9□□□□□ -0.98
CLCN3-211ENST00000613795 FANCIQ9NVI1 1328 aa8.9□□□□□ -0.99
CLCN3-211ENST00000613795 CFAP53Q96M91 514 aa8.88□□□□□ -0.99
CLCN3-211ENST00000613795 ARID3AQ99856 593 aa8.88□□□□□ -0.99
CLCN3-211ENST00000613795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLCN3-211ENST00000613795 CHMP4BQ9H444 224 aaKnown RBP8.87□□□□□ -0.99
CLCN3-211ENST00000613795 SMARCA2P51531 1590 aa8.87□□□□□ -0.99
CLCN3-211ENST00000613795 B4GALNT3Q6L9W6 998 aa8.87□□□□□ -0.99
CLCN3-211ENST00000613795 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-211ENST00000613795 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
CLCN3-211ENST00000613795 PKNOX2Q96KN3 472 aa8.86□□□□□ -0.99
CLCN3-211ENST00000613795 TCERG1O14776 1098 aaKnown RBP8.85□□□□□ -0.99
CLCN3-211ENST00000613795 ERCC6Q03468 1493 aa8.84□□□□□ -0.99
CLCN3-211ENST00000613795 GOLGA6L6A8MZA4 724 aa8.84□□□□□ -0.99
CLCN3-211ENST00000613795 PPP1R15AO75807 674 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-211ENST00000613795 GOLGA6L3A6NEY3 463 aa8.83□□□□□ -1
CLCN3-211ENST00000613795 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
CLCN3-211ENST00000613795 TNNT3P45378 269 aaPredicted RBP8.83□□□□□ -1
CLCN3-211ENST00000613795 CFDP1Q9UEE9 299 aaPredicted RBP8.83□□□□□ -1
CLCN3-211ENST00000613795 KANK1Q14678 1352 aa8.83□□□□□ -1
CLCN3-211ENST00000613795 MS4A1P11836 297 aa8.82□□□□□ -1
CLCN3-211ENST00000613795 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
CLCN3-211ENST00000613795 NRDCO43847 1150 aa8.81□□□□□ -1
CLCN3-211ENST00000613795 HSCBQ8IWL3 235 aa8.81□□□□□ -1
CLCN3-211ENST00000613795 ARID4BQ4LE39 1312 aaPredicted RBP8.81□□□□□ -1
CLCN3-211ENST00000613795 HSP90AB1P08238 724 aaKnown RBP8.8□□□□□ -1
CLCN3-211ENST00000613795 CASC1Q6TDU7 716 aa8.8□□□□□ -1
CLCN3-211ENST00000613795 GSE1Q14687 1217 aa8.8□□□□□ -1
CLCN3-211ENST00000613795 KDM2AQ9Y2K7 1162 aa8.8□□□□□ -1
CLCN3-211ENST00000613795 CCNB3Q8WWL7 1395 aa8.8□□□□□ -1
CLCN3-211ENST00000613795 GBP4Q96PP9 640 aa8.79□□□□□ -1
CLCN3-211ENST00000613795 KNSTRNQ9Y448 316 aa8.79□□□□□ -1
CLCN3-211ENST00000613795 NUDCQ9Y266 331 aa8.79□□□□□ -1
CLCN3-211ENST00000613795 KIAA2012Q0VF49 1180 aa8.79□□□□□ -1
CLCN3-211ENST00000613795 ZRSR1Q15695 479 aaKnown RBP8.79□□□□□ -1
CLCN3-211ENST00000613795 CFAP44Q96MT7 982 aa8.78□□□□□ -1
CLCN3-211ENST00000613795 PDS5BQ9NTI5 1447 aa8.78□□□□□ -1
CLCN3-211ENST00000613795 CARMIL2Q6F5E8 1435 aa8.77□□□□□ -1
CLCN3-211ENST00000613795 RRP7BPQ9NSQ0 103 aa8.77□□□□□ -1
CLCN3-211ENST00000613795 RGS3P49796 1198 aa8.77□□□□□ -1.01
CLCN3-211ENST00000613795 HIRIP3Q9BW71 556 aaPredicted RBP8.76□□□□□ -1.01
CLCN3-211ENST00000613795 CARMIL1Q5VZK9 1371 aa8.76□□□□□ -1.01
CLCN3-211ENST00000613795 ARHGAP35Q9NRY4 1499 aa8.75□□□□□ -1.01
CLCN3-211ENST00000613795 CARD11Q9BXL7 1154 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms