RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
LINC01138-204ENST00000613452 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
LINC01138-204ENST00000613452 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
LINC01138-204ENST00000613452 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
LINC01138-204ENST00000613452 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
LINC01138-204ENST00000613452 CUL7Q14999 1698 aa16.56■□□□□ 0.24
LINC01138-204ENST00000613452 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
LINC01138-204ENST00000613452 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
LINC01138-204ENST00000613452 PTPRGP23470 1445 aa16.5■□□□□ 0.23
LINC01138-204ENST00000613452 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
LINC01138-204ENST00000613452 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
LINC01138-204ENST00000613452 ABCC10Q5T3U5 1492 aa16.47■□□□□ 0.23
LINC01138-204ENST00000613452 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
LINC01138-204ENST00000613452 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
LINC01138-204ENST00000613452 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
LINC01138-204ENST00000613452 IQGAP2Q13576 1575 aa16.38■□□□□ 0.21
LINC01138-204ENST00000613452 UHRF1BP1LA0JNW5 1464 aa16.36■□□□□ 0.21
LINC01138-204ENST00000613452 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
LINC01138-204ENST00000613452 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
LINC01138-204ENST00000613452 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
LINC01138-204ENST00000613452 ABCC2Q92887 1545 aa16.35■□□□□ 0.21
LINC01138-204ENST00000613452 DISP1Q96F81 1524 aa16.34■□□□□ 0.21
LINC01138-204ENST00000613452 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
LINC01138-204ENST00000613452 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.2
LINC01138-204ENST00000613452 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
LINC01138-204ENST00000613452 FAM9AQ8IZU1 332 aaPredicted RBP16.29■□□□□ 0.2
LINC01138-204ENST00000613452 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
LINC01138-204ENST00000613452 ASXL2Q76L83 1435 aa16.28■□□□□ 0.2
LINC01138-204ENST00000613452 KDM5BQ9UGL1 1544 aa16.26■□□□□ 0.19
LINC01138-204ENST00000613452 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
LINC01138-204ENST00000613452 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
LINC01138-204ENST00000613452 GLI2P10070 1586 aa16.25■□□□□ 0.19
LINC01138-204ENST00000613452 KIAA0556O60303 1618 aa16.2■□□□□ 0.18
LINC01138-204ENST00000613452 EPRSP07814 1512 aaKnown RBP16.18■□□□□ 0.18
LINC01138-204ENST00000613452 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
LINC01138-204ENST00000613452 KDM6BO15054 1643 aa16.16■□□□□ 0.18
LINC01138-204ENST00000613452 EEA1Q15075 1411 aa16.15■□□□□ 0.18
LINC01138-204ENST00000613452 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
LINC01138-204ENST00000613452 TEX14Q8IWB6 1497 aa16.12■□□□□ 0.17
LINC01138-204ENST00000613452 TSPOAP1O95153 1857 aa16.12■□□□□ 0.17
LINC01138-204ENST00000613452 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
LINC01138-204ENST00000613452 WDR7Q9Y4E6 1490 aa16.11■□□□□ 0.17
LINC01138-204ENST00000613452 KCNH8Q96L42 1107 aa16.11■□□□□ 0.17
LINC01138-204ENST00000613452 ABCA8O94911 1581 aa16.1■□□□□ 0.17
LINC01138-204ENST00000613452 ZCCHC11Q5TAX3 1644 aaKnown RBP16.1■□□□□ 0.17
LINC01138-204ENST00000613452 P3H3Q8IVL6 736 aa16.09■□□□□ 0.17
LINC01138-204ENST00000613452 CD109Q6YHK3 1445 aa16.08■□□□□ 0.16
LINC01138-204ENST00000613452 MAP3K4Q9Y6R4 1608 aa16.06■□□□□ 0.16
LINC01138-204ENST00000613452 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
LINC01138-204ENST00000613452 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
LINC01138-204ENST00000613452 PPRC1Q5VV67 1664 aaKnown RBP16.05■□□□□ 0.16
LINC01138-204ENST00000613452 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
LINC01138-204ENST00000613452 ATP10BO94823 1461 aa16.03■□□□□ 0.16
LINC01138-204ENST00000613452 PHLDB1Q86UU1 1377 aa16.02■□□□□ 0.16
LINC01138-204ENST00000613452 SAMD9Q5K651 1589 aa15.97■□□□□ 0.15
LINC01138-204ENST00000613452 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
LINC01138-204ENST00000613452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
LINC01138-204ENST00000613452 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
LINC01138-204ENST00000613452 CFAP43Q8NDM7 1665 aa15.95■□□□□ 0.14
LINC01138-204ENST00000613452 ARID3CA6NKF2 412 aa15.95■□□□□ 0.14
LINC01138-204ENST00000613452 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
LINC01138-204ENST00000613452 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
LINC01138-204ENST00000613452 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
LINC01138-204ENST00000613452 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
LINC01138-204ENST00000613452 RAPGEF6Q8TEU7 1601 aa15.9■□□□□ 0.14
LINC01138-204ENST00000613452 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
LINC01138-204ENST00000613452 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
LINC01138-204ENST00000613452 KIF21BO75037 1637 aa15.88■□□□□ 0.13
LINC01138-204ENST00000613452 NEO1Q92859 1461 aa15.87■□□□□ 0.13
LINC01138-204ENST00000613452 EFCAB5A4FU69 1503 aa15.87■□□□□ 0.13
LINC01138-204ENST00000613452 ABCA9Q8IUA7 1624 aa15.86■□□□□ 0.13
LINC01138-204ENST00000613452 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
LINC01138-204ENST00000613452 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
LINC01138-204ENST00000613452 FMN1Q68DA7 1419 aa15.8■□□□□ 0.12
LINC01138-204ENST00000613452 AKNAQ7Z591 1439 aa15.77■□□□□ 0.11
LINC01138-204ENST00000613452 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
LINC01138-204ENST00000613452 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
LINC01138-204ENST00000613452 ARHGAP35Q9NRY4 1499 aa15.73■□□□□ 0.11
LINC01138-204ENST00000613452 EFCAB2Q5VUJ9 269 aa15.73■□□□□ 0.11
LINC01138-204ENST00000613452 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
LINC01138-204ENST00000613452 PLCH2O75038 1416 aa15.73■□□□□ 0.11
LINC01138-204ENST00000613452 FANCAO15360 1455 aa15.72■□□□□ 0.11
LINC01138-204ENST00000613452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.72■□□□□ 0.11
LINC01138-204ENST00000613452 ARID4BQ4LE39 1312 aaPredicted RBP15.7■□□□□ 0.1
LINC01138-204ENST00000613452 MAGI2Q86UL8 1455 aa15.69■□□□□ 0.1
LINC01138-204ENST00000613452 CFAP74Q9C0B2 1584 aa15.66■□□□□ 0.1
LINC01138-204ENST00000613452 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
LINC01138-204ENST00000613452 SCAPERQ9BY12 1400 aa15.66■□□□□ 0.1
LINC01138-204ENST00000613452 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
LINC01138-204ENST00000613452 POGZQ7Z3K3 1410 aa15.64■□□□□ 0.09
LINC01138-204ENST00000613452 HECW1Q76N89 1606 aa15.64■□□□□ 0.09
LINC01138-204ENST00000613452 PTPRMP28827 1452 aa15.64■□□□□ 0.09
LINC01138-204ENST00000613452 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
LINC01138-204ENST00000613452 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
LINC01138-204ENST00000613452 CLIP1P30622 1438 aa15.62■□□□□ 0.09
LINC01138-204ENST00000613452 CASKIN1Q8WXD9 1431 aa15.62■□□□□ 0.09
LINC01138-204ENST00000613452 HECW2Q9P2P5 1572 aa15.62■□□□□ 0.09
LINC01138-204ENST00000613452 ZMYM4Q5VZL5 1548 aa15.61■□□□□ 0.09
LINC01138-204ENST00000613452 TTC37Q6PGP7 1564 aa15.61■□□□□ 0.09
LINC01138-204ENST00000613452 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms