RNA–Protein interactions for RNA: ENST00000613129.4

SURF4-208, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,148 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-208ENST00000613129 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
SURF4-208ENST00000613129 SETD5Q9C0A6 1442 aa23.29■■□□□ 1.32
SURF4-208ENST00000613129 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
SURF4-208ENST00000613129 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
SURF4-208ENST00000613129 ARHGAP35Q9NRY4 1499 aa23.26■■□□□ 1.31
SURF4-208ENST00000613129 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
SURF4-208ENST00000613129 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
SURF4-208ENST00000613129 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
SURF4-208ENST00000613129 CUX2O14529 1486 aa23.2■■□□□ 1.3
SURF4-208ENST00000613129 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
SURF4-208ENST00000613129 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
SURF4-208ENST00000613129 B4GALNT3Q6L9W6 998 aa23.17■■□□□ 1.3
SURF4-208ENST00000613129 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
SURF4-208ENST00000613129 CCDC184Q52MB2 194 aa23.16■■□□□ 1.3
SURF4-208ENST00000613129 NBR1Q14596 966 aa23.14■■□□□ 1.29
SURF4-208ENST00000613129 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
SURF4-208ENST00000613129 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
SURF4-208ENST00000613129 TONSLQ96HA7 1378 aa23.12■■□□□ 1.29
SURF4-208ENST00000613129 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
SURF4-208ENST00000613129 CUX1P39880 1505 aa23.06■■□□□ 1.28
SURF4-208ENST00000613129 DEKP35659 375 aaKnown RBP23.03■■□□□ 1.28
SURF4-208ENST00000613129 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
SURF4-208ENST00000613129 FANCIQ9NVI1 1328 aa23.02■■□□□ 1.28
SURF4-208ENST00000613129 LRRC9Q6ZRR7 1453 aa23■■□□□ 1.27
SURF4-208ENST00000613129 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
SURF4-208ENST00000613129 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
SURF4-208ENST00000613129 PAK3O75914 559 aaPredicted RBP22.96■■□□□ 1.27
SURF4-208ENST00000613129 HSPA5P11021 654 aaKnown RBP22.95■■□□□ 1.27
SURF4-208ENST00000613129 IGF1RP08069 1367 aa22.95■■□□□ 1.26
SURF4-208ENST00000613129 WASHC2AQ641Q2 1341 aa22.94■■□□□ 1.26
SURF4-208ENST00000613129 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
SURF4-208ENST00000613129 RRP7BPQ9NSQ0 103 aa22.92■■□□□ 1.26
SURF4-208ENST00000613129 PPP4R2Q9NY27 417 aa22.92■■□□□ 1.26
SURF4-208ENST00000613129 FOXD1Q16676 465 aa22.92■■□□□ 1.26
SURF4-208ENST00000613129 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
SURF4-208ENST00000613129 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
SURF4-208ENST00000613129 TIMELESSQ9UNS1 1208 aa22.9■■□□□ 1.26
SURF4-208ENST00000613129 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.26
SURF4-208ENST00000613129 MRS2Q9HD23 443 aa22.89■■□□□ 1.25
SURF4-208ENST00000613129 C11orf95C9JLR9 678 aaPredicted RBP22.88■■□□□ 1.25
SURF4-208ENST00000613129 ARID3CA6NKF2 412 aa22.84■■□□□ 1.25
SURF4-208ENST00000613129 PTPRKQ15262 1439 aa22.81■■□□□ 1.24
SURF4-208ENST00000613129 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.248e-7■■■■□ 26.7
SURF4-208ENST00000613129 NOP58Q9Y2X3 529 aaKnown RBP22.8■■□□□ 1.24
SURF4-208ENST00000613129 CCDC18Q5T9S5 1454 aa22.78■■□□□ 1.24
SURF4-208ENST00000613129 PCF11O94913 1555 aaKnown RBP22.75■■□□□ 1.23
SURF4-208ENST00000613129 EIF4G2P78344 907 aaKnown RBP eCLIP22.75■■□□□ 1.23
SURF4-208ENST00000613129 RTN4Q9NQC3 1192 aaKnown RBP22.75■■□□□ 1.23
SURF4-208ENST00000613129 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
SURF4-208ENST00000613129 ANO8Q9HCE9 1232 aaPredicted RBP22.73■■□□□ 1.23
SURF4-208ENST00000613129 NPM2Q86SE8 214 aaKnown RBP22.73■■□□□ 1.23
SURF4-208ENST00000613129 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
SURF4-208ENST00000613129 L3MBTL2Q969R5 705 aa22.71■■□□□ 1.23
SURF4-208ENST00000613129 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
SURF4-208ENST00000613129 AKNAQ7Z591 1439 aa22.69■■□□□ 1.22
SURF4-208ENST00000613129 CCDC136Q96JN2 1154 aa22.67■■□□□ 1.22
SURF4-208ENST00000613129 FGD6Q6ZV73 1430 aa22.67■■□□□ 1.22
SURF4-208ENST00000613129 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
SURF4-208ENST00000613129 SALL2Q9Y467 1007 aaPredicted RBP22.65■■□□□ 1.22
SURF4-208ENST00000613129 UACAQ9BZF9 1416 aa22.64■■□□□ 1.22
SURF4-208ENST00000613129 PRKCSHP14314 528 aaPredicted RBP22.62■■□□□ 1.21
SURF4-208ENST00000613129 MAP3K1Q13233 1512 aa22.62■■□□□ 1.21
SURF4-208ENST00000613129 NBPF8Q3BBV2 869 aa22.61■■□□□ 1.21
SURF4-208ENST00000613129 IL27Q8NEV9 243 aa22.61■■□□□ 1.21
SURF4-208ENST00000613129 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
SURF4-208ENST00000613129 NAIPQ13075 1403 aa22.6■■□□□ 1.21
SURF4-208ENST00000613129 CFTRP13569 1480 aa22.6■■□□□ 1.21
SURF4-208ENST00000613129 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
SURF4-208ENST00000613129 LAS1LQ9Y4W2 734 aaKnown RBP22.58■■□□□ 1.21
SURF4-208ENST00000613129 ANP32AP39687 249 aaKnown RBP22.58■■□□□ 1.21
SURF4-208ENST00000613129 ZBTB47Q9UFB7 747 aaPredicted RBP22.58■■□□□ 1.21
SURF4-208ENST00000613129 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
SURF4-208ENST00000613129 CNTLNQ9NXG0 1405 aa22.56■■□□□ 1.2
SURF4-208ENST00000613129 ERICH6BQ5W0A0 696 aa22.56■■□□□ 1.2
SURF4-208ENST00000613129 HFM1A2PYH4 1435 aa22.56■■□□□ 1.2
SURF4-208ENST00000613129 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
SURF4-208ENST00000613129 MPHOSPH9Q99550 1183 aa22.55■■□□□ 1.2
SURF4-208ENST00000613129 CCDC7Q96M83 1385 aa22.55■■□□□ 1.2
SURF4-208ENST00000613129 KDM5BQ9UGL1 1544 aa22.55■■□□□ 1.2
SURF4-208ENST00000613129 KIF7Q2M1P5 1343 aa22.53■■□□□ 1.2
SURF4-208ENST00000613129 IPO9Q96P70 1041 aaKnown RBP22.53■■□□□ 1.2
SURF4-208ENST00000613129 PTPN23Q9H3S7 1636 aa22.52■■□□□ 1.2
SURF4-208ENST00000613129 SKAP1Q86WV1 359 aa22.5■■□□□ 1.19
SURF4-208ENST00000613129 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
SURF4-208ENST00000613129 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
SURF4-208ENST00000613129 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
SURF4-208ENST00000613129 MYT1LQ9UL68 1186 aa22.48■■□□□ 1.19
SURF4-208ENST00000613129 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
SURF4-208ENST00000613129 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.48■■□□□ 1.19
SURF4-208ENST00000613129 NCOA2Q15596 1464 aa22.45■■□□□ 1.18
SURF4-208ENST00000613129 FYCO1Q9BQS8 1478 aa22.44■■□□□ 1.18
SURF4-208ENST00000613129 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
SURF4-208ENST00000613129 DENND4BO75064 1496 aaPredicted RBP22.42■■□□□ 1.18
SURF4-208ENST00000613129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.41■■□□□ 1.181e-7■■■□□ 16
SURF4-208ENST00000613129 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
SURF4-208ENST00000613129 KDM6BO15054 1643 aa22.39■■□□□ 1.18
SURF4-208ENST00000613129 EXOC6Q8TAG9 804 aa22.39■■□□□ 1.17
SURF4-208ENST00000613129 NCOA1Q15788 1441 aa22.39■■□□□ 1.17
SURF4-208ENST00000613129 SLC4A1APQ9BWU0 796 aaKnown RBP22.39■■□□□ 1.17
SURF4-208ENST00000613129 NEFMP07197 916 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms