RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
PCDHGA4-202ENST00000612927 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
PCDHGA4-202ENST00000612927 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
PCDHGA4-202ENST00000612927 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
PCDHGA4-202ENST00000612927 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
PCDHGA4-202ENST00000612927 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
PCDHGA4-202ENST00000612927 CTTNBP2Q8WZ74 1663 aa18.83■□□□□ 0.61
PCDHGA4-202ENST00000612927 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
PCDHGA4-202ENST00000612927 FHOD3Q2V2M9 1422 aa18.78■□□□□ 0.6
PCDHGA4-202ENST00000612927 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
PCDHGA4-202ENST00000612927 TIAM1Q13009 1591 aa18.78■□□□□ 0.6
PCDHGA4-202ENST00000612927 PCF11O94913 1555 aaKnown RBP18.77■□□□□ 0.59
PCDHGA4-202ENST00000612927 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
PCDHGA4-202ENST00000612927 MAP3K1Q13233 1512 aa18.76■□□□□ 0.59
PCDHGA4-202ENST00000612927 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
PCDHGA4-202ENST00000612927 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
PCDHGA4-202ENST00000612927 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
PCDHGA4-202ENST00000612927 WDR62O43379 1518 aa18.73■□□□□ 0.59
PCDHGA4-202ENST00000612927 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
PCDHGA4-202ENST00000612927 LRRC9Q6ZRR7 1453 aa18.7■□□□□ 0.58
PCDHGA4-202ENST00000612927 FYCO1Q9BQS8 1478 aa18.68■□□□□ 0.58
PCDHGA4-202ENST00000612927 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
PCDHGA4-202ENST00000612927 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
PCDHGA4-202ENST00000612927 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
PCDHGA4-202ENST00000612927 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
PCDHGA4-202ENST00000612927 CCNB3Q8WWL7 1395 aa18.66■□□□□ 0.58
PCDHGA4-202ENST00000612927 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
PCDHGA4-202ENST00000612927 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
PCDHGA4-202ENST00000612927 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
PCDHGA4-202ENST00000612927 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
PCDHGA4-202ENST00000612927 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
PCDHGA4-202ENST00000612927 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
PCDHGA4-202ENST00000612927 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
PCDHGA4-202ENST00000612927 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
PCDHGA4-202ENST00000612927 ZNF316A6NFI3 1004 aaPredicted RBP18.59■□□□□ 0.57
PCDHGA4-202ENST00000612927 ITGAEP38570 1179 aa18.56■□□□□ 0.56
PCDHGA4-202ENST00000612927 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
PCDHGA4-202ENST00000612927 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
PCDHGA4-202ENST00000612927 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
PCDHGA4-202ENST00000612927 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
PCDHGA4-202ENST00000612927 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.54
PCDHGA4-202ENST00000612927 UGGT2Q9NYU1 1516 aa18.45■□□□□ 0.54
PCDHGA4-202ENST00000612927 GRIN2AQ12879 1464 aa18.45■□□□□ 0.54
PCDHGA4-202ENST00000612927 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
PCDHGA4-202ENST00000612927 CLSPNQ9HAW4 1339 aa18.43■□□□□ 0.54
PCDHGA4-202ENST00000612927 KIAA0586Q9BVV6 1533 aa18.42■□□□□ 0.54
PCDHGA4-202ENST00000612927 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
PCDHGA4-202ENST00000612927 RAB3GAP2Q9H2M9 1393 aa18.41■□□□□ 0.54
PCDHGA4-202ENST00000612927 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
PCDHGA4-202ENST00000612927 HECW1Q76N89 1606 aa18.4■□□□□ 0.54
PCDHGA4-202ENST00000612927 FGD6Q6ZV73 1430 aa18.39■□□□□ 0.54
PCDHGA4-202ENST00000612927 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.53
PCDHGA4-202ENST00000612927 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.53
PCDHGA4-202ENST00000612927 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
PCDHGA4-202ENST00000612927 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
PCDHGA4-202ENST00000612927 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
PCDHGA4-202ENST00000612927 DISP1Q96F81 1524 aa18.37■□□□□ 0.53
PCDHGA4-202ENST00000612927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.53
PCDHGA4-202ENST00000612927 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
PCDHGA4-202ENST00000612927 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
PCDHGA4-202ENST00000612927 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
PCDHGA4-202ENST00000612927 EPRSP07814 1512 aaKnown RBP18.35■□□□□ 0.53
PCDHGA4-202ENST00000612927 MIER1Q8N108 512 aa18.35■□□□□ 0.53
PCDHGA4-202ENST00000612927 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
PCDHGA4-202ENST00000612927 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
PCDHGA4-202ENST00000612927 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.53
PCDHGA4-202ENST00000612927 PRKCSHP14314 528 aaPredicted RBP18.33■□□□□ 0.52
PCDHGA4-202ENST00000612927 MYOM3Q5VTT5 1437 aa18.33■□□□□ 0.52
PCDHGA4-202ENST00000612927 ARHGEF11O15085 1522 aa18.32■□□□□ 0.52
PCDHGA4-202ENST00000612927 FBLN2P98095 1184 aa18.3■□□□□ 0.52
PCDHGA4-202ENST00000612927 MAPKBP1O60336 1514 aa18.3■□□□□ 0.52
PCDHGA4-202ENST00000612927 ARID3CA6NKF2 412 aa18.29■□□□□ 0.52
PCDHGA4-202ENST00000612927 NUP160Q12769 1436 aa18.27■□□□□ 0.52
PCDHGA4-202ENST00000612927 PTPRKQ15262 1439 aa18.27■□□□□ 0.51
PCDHGA4-202ENST00000612927 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
PCDHGA4-202ENST00000612927 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
PCDHGA4-202ENST00000612927 RAPGEF6Q8TEU7 1601 aa18.24■□□□□ 0.51
PCDHGA4-202ENST00000612927 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
PCDHGA4-202ENST00000612927 BCL11AQ9H165 835 aa18.19■□□□□ 0.5
PCDHGA4-202ENST00000612927 HFM1A2PYH4 1435 aa18.18■□□□□ 0.5
PCDHGA4-202ENST00000612927 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
PCDHGA4-202ENST00000612927 PLB1Q6P1J6 1458 aa18.17■□□□□ 0.5
PCDHGA4-202ENST00000612927 CARMIL2Q6F5E8 1435 aa18.16■□□□□ 0.5
PCDHGA4-202ENST00000612927 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
PCDHGA4-202ENST00000612927 NAIPQ13075 1403 aa18.15■□□□□ 0.5
PCDHGA4-202ENST00000612927 MIA2Q96PC5 1412 aa18.14■□□□□ 0.49
PCDHGA4-202ENST00000612927 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
PCDHGA4-202ENST00000612927 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
PCDHGA4-202ENST00000612927 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA4-202ENST00000612927 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.49
PCDHGA4-202ENST00000612927 CHIC2Q9UKJ5 165 aa18.08■□□□□ 0.48
PCDHGA4-202ENST00000612927 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.48
PCDHGA4-202ENST00000612927 UACAQ9BZF9 1416 aa18.08■□□□□ 0.48
PCDHGA4-202ENST00000612927 CHD1O14646 1710 aa18.07■□□□□ 0.48
PCDHGA4-202ENST00000612927 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
PCDHGA4-202ENST00000612927 ABCA8O94911 1581 aa18.06■□□□□ 0.48
PCDHGA4-202ENST00000612927 GCC2Q8IWJ2 1684 aa18.06■□□□□ 0.48
PCDHGA4-202ENST00000612927 TSHZ2Q9NRE2 1034 aa18.05■□□□□ 0.48
PCDHGA4-202ENST00000612927 AKNAQ7Z591 1439 aa18.04■□□□□ 0.48
PCDHGA4-202ENST00000612927 KIF14Q15058 1648 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms