RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 CEP164Q9UPV0 1460 aa9.38□□□□□ -0.91
PBX1-221ENST00000612123 ARID4BQ4LE39 1312 aaPredicted RBP9.36□□□□□ -0.91
PBX1-221ENST00000612123 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
PBX1-221ENST00000612123 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
PBX1-221ENST00000612123 CHMP7Q8WUX9 453 aaPredicted RBP9.34□□□□□ -0.91
PBX1-221ENST00000612123 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
PBX1-221ENST00000612123 PKNOX2Q96KN3 472 aa9.34□□□□□ -0.92
PBX1-221ENST00000612123 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
PBX1-221ENST00000612123 LAMC3Q9Y6N6 1575 aa9.32□□□□□ -0.92
PBX1-221ENST00000612123 CUX2O14529 1486 aa9.31□□□□□ -0.92
PBX1-221ENST00000612123 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
PBX1-221ENST00000612123 MRC2Q9UBG0 1479 aa9.3□□□□□ -0.92
PBX1-221ENST00000612123 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
PBX1-221ENST00000612123 WRNQ14191 1432 aaPredicted RBP eCLIP9.29□□□□□ -0.92
PBX1-221ENST00000612123 WIZO95785 1651 aa9.29□□□□□ -0.92
PBX1-221ENST00000612123 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
PBX1-221ENST00000612123 KIF27Q86VH2 1401 aa9.28□□□□□ -0.92
PBX1-221ENST00000612123 TSPY4P0CV99 314 aa9.27□□□□□ -0.93
PBX1-221ENST00000612123 TSPY10P0CW01 314 aa9.27□□□□□ -0.93
PBX1-221ENST00000612123 DAXXQ9UER7 740 aaPredicted RBP9.27□□□□□ -0.93
PBX1-221ENST00000612123 ANP32CO43423 234 aa9.26□□□□□ -0.93
PBX1-221ENST00000612123 MTUS2Q5JR59 1369 aa9.25□□□□□ -0.93
PBX1-221ENST00000612123 ARXQ96QS3 562 aa9.25□□□□□ -0.93
PBX1-221ENST00000612123 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
PBX1-221ENST00000612123 AMER1Q5JTC6 1135 aaPredicted RBP9.24□□□□□ -0.93
PBX1-221ENST00000612123 CLIP1P30622 1438 aa9.24□□□□□ -0.93
PBX1-221ENST00000612123 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
PBX1-221ENST00000612123 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
PBX1-221ENST00000612123 TRHP20396 242 aaPredicted RBP9.23□□□□□ -0.93
PBX1-221ENST00000612123 NEFMP07197 916 aa9.23□□□□□ -0.93
PBX1-221ENST00000612123 GOLGA3Q08378 1498 aa9.23□□□□□ -0.93
PBX1-221ENST00000612123 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
PBX1-221ENST00000612123 HIRIP3Q9BW71 556 aaPredicted RBP9.22□□□□□ -0.93
PBX1-221ENST00000612123 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
PBX1-221ENST00000612123 UBE2Q2Q8WVN8 375 aa9.21□□□□□ -0.93
PBX1-221ENST00000612123 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.93
PBX1-221ENST00000612123 PLEKHD1A6NEE1 506 aa9.21□□□□□ -0.93
PBX1-221ENST00000612123 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
PBX1-221ENST00000612123 NESP48681 1621 aa9.2□□□□□ -0.94
PBX1-221ENST00000612123 TONSLQ96HA7 1378 aa9.2□□□□□ -0.94
PBX1-221ENST00000612123 STAG3Q9UJ98 1225 aa9.19□□□□□ -0.94
PBX1-221ENST00000612123 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
PBX1-221ENST00000612123 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
PBX1-221ENST00000612123 LAS1LQ9Y4W2 734 aaKnown RBP9.17□□□□□ -0.94
PBX1-221ENST00000612123 TNIKQ9UKE5 1360 aa9.16□□□□□ -0.94
PBX1-221ENST00000612123 NPM2Q86SE8 214 aaKnown RBP9.16□□□□□ -0.94
PBX1-221ENST00000612123 ARID3AQ99856 593 aa9.15□□□□□ -0.94
PBX1-221ENST00000612123 IFT140Q96RY7 1462 aa9.15□□□□□ -0.94
PBX1-221ENST00000612123 SOGA1O94964 1423 aa9.15□□□□□ -0.94
PBX1-221ENST00000612123 CFTRP13569 1480 aa9.15□□□□□ -0.94
PBX1-221ENST00000612123 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
PBX1-221ENST00000612123 CLSPNQ9HAW4 1339 aa9.12□□□□□ -0.95
PBX1-221ENST00000612123 FHAD1B1AJZ9 1412 aa9.12□□□□□ -0.95
PBX1-221ENST00000612123 CHGAP10645 457 aaKnown RBP9.11□□□□□ -0.95
PBX1-221ENST00000612123 CEP162Q5TB80 1403 aa9.11□□□□□ -0.95
PBX1-221ENST00000612123 ZMYND15Q9H091 742 aa9.09□□□□□ -0.95
PBX1-221ENST00000612123 CARMIL1Q5VZK9 1371 aa9.09□□□□□ -0.95
PBX1-221ENST00000612123 CFDP1Q9UEE9 299 aaPredicted RBP9.08□□□□□ -0.96
PBX1-221ENST00000612123 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
PBX1-221ENST00000612123 PRDM2Q13029 1718 aa9.07□□□□□ -0.96
PBX1-221ENST00000612123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.96
PBX1-221ENST00000612123 MAPK8IP2Q13387 824 aaPredicted RBP9.05□□□□□ -0.96
PBX1-221ENST00000612123 PLPPR3Q6T4P5 718 aa9.05□□□□□ -0.96
PBX1-221ENST00000612123 DNMBPQ6XZF7 1577 aa9.04□□□□□ -0.96
PBX1-221ENST00000612123 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
PBX1-221ENST00000612123 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
PBX1-221ENST00000612123 CANXP27824 592 aaKnown RBP9.03□□□□□ -0.96
PBX1-221ENST00000612123 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
PBX1-221ENST00000612123 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.97
PBX1-221ENST00000612123 TOPBP1Q92547 1522 aa9.02□□□□□ -0.97
PBX1-221ENST00000612123 SIN3AQ96ST3 1273 aa9.01□□□□□ -0.97
PBX1-221ENST00000612123 KIF21AQ7Z4S6 1674 aa9.01□□□□□ -0.97
PBX1-221ENST00000612123 CDCA8Q53HL2 280 aa9.01□□□□□ -0.97
PBX1-221ENST00000612123 WDR62O43379 1518 aa9.01□□□□□ -0.97
PBX1-221ENST00000612123 RTL5Q5HYW3 569 aaPredicted RBP9□□□□□ -0.97
PBX1-221ENST00000612123 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
PBX1-221ENST00000612123 TOP2BQ02880 1626 aa9□□□□□ -0.97
PBX1-221ENST00000612123 GRIN2BQ13224 1484 aa9□□□□□ -0.97
PBX1-221ENST00000612123 BIVM-ERCC5R4GMW8 1640 aa8.99□□□□□ -0.97
PBX1-221ENST00000612123 EIF4G2P78344 907 aaKnown RBP eCLIP8.99□□□□□ -0.97
PBX1-221ENST00000612123 CCNB3Q8WWL7 1395 aa8.99□□□□□ -0.97
PBX1-221ENST00000612123 FGD5Q6ZNL6 1462 aa8.98□□□□□ -0.97
PBX1-221ENST00000612123 CYB5RLQ6IPT4 315 aa8.98□□□□□ -0.97
PBX1-221ENST00000612123 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
PBX1-221ENST00000612123 RRP7BPQ9NSQ0 103 aa8.98□□□□□ -0.97
PBX1-221ENST00000612123 GAPVD1Q14C86 1478 aa8.97□□□□□ -0.97
PBX1-221ENST00000612123 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
PBX1-221ENST00000612123 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
PBX1-221ENST00000612123 TMC1Q8TDI8 760 aa8.95□□□□□ -0.98
PBX1-221ENST00000612123 AQRO60306 1485 aaKnown RBP eCLIP8.95□□□□□ -0.98
PBX1-221ENST00000612123 SKAP1Q86WV1 359 aa8.95□□□□□ -0.98
PBX1-221ENST00000612123 DDX10Q13206 875 aaKnown RBP8.95□□□□□ -0.98
PBX1-221ENST00000612123 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
PBX1-221ENST00000612123 USP35Q9P2H5 1018 aa8.94□□□□□ -0.98
PBX1-221ENST00000612123 URB2Q14146 1524 aaKnown RBP8.94□□□□□ -0.98
PBX1-221ENST00000612123 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
PBX1-221ENST00000612123 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.94□□□□□ -0.98
PBX1-221ENST00000612123 KANK1Q14678 1352 aa8.93□□□□□ -0.98
PBX1-221ENST00000612123 KIF21BO75037 1637 aa8.93□□□□□ -0.98
PBX1-221ENST00000612123 RBM10P98175 930 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms