RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
PVT1-221ENST00000612011 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
PVT1-221ENST00000612011 NUP160Q12769 1436 aa16.44■□□□□ 0.22
PVT1-221ENST00000612011 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
PVT1-221ENST00000612011 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
PVT1-221ENST00000612011 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
PVT1-221ENST00000612011 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
PVT1-221ENST00000612011 SAMD9Q5K651 1589 aa16.35■□□□□ 0.21
PVT1-221ENST00000612011 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
PVT1-221ENST00000612011 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
PVT1-221ENST00000612011 KIAA0556O60303 1618 aa16.32■□□□□ 0.2
PVT1-221ENST00000612011 CLIP1P30622 1438 aa16.31■□□□□ 0.2
PVT1-221ENST00000612011 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
PVT1-221ENST00000612011 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
PVT1-221ENST00000612011 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
PVT1-221ENST00000612011 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
PVT1-221ENST00000612011 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
PVT1-221ENST00000612011 ERCC6L2Q5T890 1561 aa16.21■□□□□ 0.19
PVT1-221ENST00000612011 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
PVT1-221ENST00000612011 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
PVT1-221ENST00000612011 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
PVT1-221ENST00000612011 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
PVT1-221ENST00000612011 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
PVT1-221ENST00000612011 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
PVT1-221ENST00000612011 LRRIQ1Q96JM4 1722 aa16.16■□□□□ 0.18
PVT1-221ENST00000612011 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
PVT1-221ENST00000612011 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
PVT1-221ENST00000612011 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
PVT1-221ENST00000612011 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
PVT1-221ENST00000612011 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
PVT1-221ENST00000612011 FMN1Q68DA7 1419 aa16.11■□□□□ 0.17
PVT1-221ENST00000612011 HECW1Q76N89 1606 aa16.11■□□□□ 0.17
PVT1-221ENST00000612011 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
PVT1-221ENST00000612011 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
PVT1-221ENST00000612011 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
PVT1-221ENST00000612011 ABCA8O94911 1581 aa16.07■□□□□ 0.16
PVT1-221ENST00000612011 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
PVT1-221ENST00000612011 PTPRGP23470 1445 aa16.03■□□□□ 0.16
PVT1-221ENST00000612011 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
PVT1-221ENST00000612011 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
PVT1-221ENST00000612011 ADCY10Q96PN6 1610 aa16.01■□□□□ 0.15
PVT1-221ENST00000612011 ABCC2Q92887 1545 aa16■□□□□ 0.15
PVT1-221ENST00000612011 TIAM1Q13009 1591 aa16■□□□□ 0.15
PVT1-221ENST00000612011 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
PVT1-221ENST00000612011 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
PVT1-221ENST00000612011 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
PVT1-221ENST00000612011 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
PVT1-221ENST00000612011 EPRSP07814 1512 aaKnown RBP15.95■□□□□ 0.14
PVT1-221ENST00000612011 CDK13Q14004 1512 aaKnown RBP15.95■□□□□ 0.14
PVT1-221ENST00000612011 ATP1B4Q9UN42 357 aaPredicted RBP15.95■□□□□ 0.14
PVT1-221ENST00000612011 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
PVT1-221ENST00000612011 UHRF1BP1LA0JNW5 1464 aa15.94■□□□□ 0.14
PVT1-221ENST00000612011 APLP2Q06481 763 aa15.91■□□□□ 0.14
PVT1-221ENST00000612011 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
PVT1-221ENST00000612011 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
PVT1-221ENST00000612011 ARID3CA6NKF2 412 aa15.87■□□□□ 0.13
PVT1-221ENST00000612011 KDM5BQ9UGL1 1544 aa15.87■□□□□ 0.13
PVT1-221ENST00000612011 ATP10BO94823 1461 aa15.86■□□□□ 0.13
PVT1-221ENST00000612011 MAGI3Q5TCQ9 1506 aa15.86■□□□□ 0.13
PVT1-221ENST00000612011 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
PVT1-221ENST00000612011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
PVT1-221ENST00000612011 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
PVT1-221ENST00000612011 KIF14Q15058 1648 aa15.82■□□□□ 0.12
PVT1-221ENST00000612011 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
PVT1-221ENST00000612011 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
PVT1-221ENST00000612011 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
PVT1-221ENST00000612011 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
PVT1-221ENST00000612011 CDC42BPAQ5VT25 1732 aa15.78■□□□□ 0.12
PVT1-221ENST00000612011 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
PVT1-221ENST00000612011 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
PVT1-221ENST00000612011 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
PVT1-221ENST00000612011 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.12
PVT1-221ENST00000612011 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
PVT1-221ENST00000612011 MAPKBP1O60336 1514 aa15.76■□□□□ 0.11
PVT1-221ENST00000612011 WDR7Q9Y4E6 1490 aa15.74■□□□□ 0.11
PVT1-221ENST00000612011 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
PVT1-221ENST00000612011 NCOA2Q15596 1464 aa15.73■□□□□ 0.11
PVT1-221ENST00000612011 ASXL2Q76L83 1435 aa15.73■□□□□ 0.11
PVT1-221ENST00000612011 TTC37Q6PGP7 1564 aa15.73■□□□□ 0.11
PVT1-221ENST00000612011 KIF13AQ9H1H9 1805 aa15.73■□□□□ 0.11
PVT1-221ENST00000612011 CDC42BPBQ9Y5S2 1711 aa15.72■□□□□ 0.11
PVT1-221ENST00000612011 PLEKHD1A6NEE1 506 aa15.72■□□□□ 0.11
PVT1-221ENST00000612011 PREX2Q70Z35 1606 aa15.71■□□□□ 0.11
PVT1-221ENST00000612011 ABCA9Q8IUA7 1624 aa15.71■□□□□ 0.11
PVT1-221ENST00000612011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.7■□□□□ 0.1
PVT1-221ENST00000612011 DIP2BQ9P265 1576 aa15.67■□□□□ 0.1
PVT1-221ENST00000612011 ABCC10Q5T3U5 1492 aa15.67■□□□□ 0.1
PVT1-221ENST00000612011 TSPOAP1O95153 1857 aa15.67■□□□□ 0.1
PVT1-221ENST00000612011 PTPN23Q9H3S7 1636 aa15.65■□□□□ 0.1
PVT1-221ENST00000612011 MAP3K4Q9Y6R4 1608 aa15.65■□□□□ 0.1
PVT1-221ENST00000612011 PHLDB1Q86UU1 1377 aa15.64■□□□□ 0.09
PVT1-221ENST00000612011 MYOM3Q5VTT5 1437 aa15.64■□□□□ 0.09
PVT1-221ENST00000612011 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
PVT1-221ENST00000612011 GLI2P10070 1586 aa15.62■□□□□ 0.09
PVT1-221ENST00000612011 KCNH8Q96L42 1107 aa15.62■□□□□ 0.09
PVT1-221ENST00000612011 CFAP74Q9C0B2 1584 aa15.6■□□□□ 0.09
PVT1-221ENST00000612011 GPATCH8Q9UKJ3 1502 aaKnown RBP15.59■□□□□ 0.09
PVT1-221ENST00000612011 FGD6Q6ZV73 1430 aa15.59■□□□□ 0.09
PVT1-221ENST00000612011 RRBP1Q9P2E9 1410 aaKnown RBP15.59■□□□□ 0.09
PVT1-221ENST00000612011 ARHGAP5Q13017 1502 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms