RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 TMC1Q8TDI8 760 aa14.74□□□□□ -0.05
CDC42EP3-206ENST00000611976 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
CDC42EP3-206ENST00000611976 ZBTB47Q9UFB7 747 aaPredicted RBP14.7□□□□□ -0.06
CDC42EP3-206ENST00000611976 IRX6P78412 446 aaPredicted RBP14.69□□□□□ -0.06
CDC42EP3-206ENST00000611976 RRP7BPQ9NSQ0 103 aa14.67□□□□□ -0.06
CDC42EP3-206ENST00000611976 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
CDC42EP3-206ENST00000611976 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
CDC42EP3-206ENST00000611976 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
CDC42EP3-206ENST00000611976 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
CDC42EP3-206ENST00000611976 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.62□□□□□ -0.07
CDC42EP3-206ENST00000611976 NBR1Q14596 966 aa14.61□□□□□ -0.07
CDC42EP3-206ENST00000611976 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
CDC42EP3-206ENST00000611976 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
CDC42EP3-206ENST00000611976 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
CDC42EP3-206ENST00000611976 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
CDC42EP3-206ENST00000611976 CUX2O14529 1486 aa14.59□□□□□ -0.07
CDC42EP3-206ENST00000611976 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
CDC42EP3-206ENST00000611976 SMARCA4P51532 1647 aa14.58□□□□□ -0.07
CDC42EP3-206ENST00000611976 NEFMP07197 916 aa14.58□□□□□ -0.08
CDC42EP3-206ENST00000611976 SALL2Q9Y467 1007 aaPredicted RBP14.58□□□□□ -0.08
CDC42EP3-206ENST00000611976 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
CDC42EP3-206ENST00000611976 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
CDC42EP3-206ENST00000611976 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
CDC42EP3-206ENST00000611976 WDR43Q15061 677 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDC42EP3-206ENST00000611976 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
CDC42EP3-206ENST00000611976 RAPGEF2Q9Y4G8 1499 aa14.52□□□□□ -0.08
CDC42EP3-206ENST00000611976 DDRGK1Q96HY6 314 aa14.51□□□□□ -0.09
CDC42EP3-206ENST00000611976 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
CDC42EP3-206ENST00000611976 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
CDC42EP3-206ENST00000611976 ERICH6BQ5W0A0 696 aa14.48□□□□□ -0.09
CDC42EP3-206ENST00000611976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDC42EP3-206ENST00000611976 RBM19Q9Y4C8 960 aaKnown RBP14.46□□□□□ -0.09
CDC42EP3-206ENST00000611976 CHMP7Q8WUX9 453 aaPredicted RBP14.45□□□□□ -0.1
CDC42EP3-206ENST00000611976 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
CDC42EP3-206ENST00000611976 TSHZ2Q9NRE2 1034 aa14.44□□□□□ -0.1
CDC42EP3-206ENST00000611976 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
CDC42EP3-206ENST00000611976 FMN1Q68DA7 1419 aa14.44□□□□□ -0.1
CDC42EP3-206ENST00000611976 NOP58Q9Y2X3 529 aaKnown RBP14.43□□□□□ -0.1
CDC42EP3-206ENST00000611976 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
CDC42EP3-206ENST00000611976 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
CDC42EP3-206ENST00000611976 HSPA5P11021 654 aaKnown RBP14.42□□□□□ -0.1
CDC42EP3-206ENST00000611976 ANP32BQ92688 251 aaKnown RBP14.41□□□□□ -0.1
CDC42EP3-206ENST00000611976 EIF5BO60841 1220 aaKnown RBP14.4□□□□□ -0.1
CDC42EP3-206ENST00000611976 ATAD2BQ9ULI0 1458 aa14.4□□□□□ -0.1
CDC42EP3-206ENST00000611976 PPM1GO15355 546 aaPredicted RBP14.4□□□□□ -0.1
CDC42EP3-206ENST00000611976 HSP90AA1P07900 732 aaKnown RBP14.4□□□□□ -0.1
CDC42EP3-206ENST00000611976 CHGAP10645 457 aaKnown RBP14.38□□□□□ -0.11
CDC42EP3-206ENST00000611976 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
CDC42EP3-206ENST00000611976 CDCA8Q53HL2 280 aa14.38□□□□□ -0.11
CDC42EP3-206ENST00000611976 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
CDC42EP3-206ENST00000611976 BECN1Q14457 450 aa14.36□□□□□ -0.11
CDC42EP3-206ENST00000611976 KIF21BO75037 1637 aa14.35□□□□□ -0.11
CDC42EP3-206ENST00000611976 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
CDC42EP3-206ENST00000611976 KNSTRNQ9Y448 316 aa14.33□□□□□ -0.11
CDC42EP3-206ENST00000611976 RGL3Q3MIN7 710 aa14.32□□□□□ -0.12
CDC42EP3-206ENST00000611976 GLIPR1L2Q4G1C9 344 aa14.29□□□□□ -0.12
CDC42EP3-206ENST00000611976 FHOD3Q2V2M9 1422 aa14.29□□□□□ -0.12
CDC42EP3-206ENST00000611976 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
CDC42EP3-206ENST00000611976 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
CDC42EP3-206ENST00000611976 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
CDC42EP3-206ENST00000611976 SLC24A1O60721 1099 aa14.24□□□□□ -0.13
CDC42EP3-206ENST00000611976 DEKP35659 375 aaKnown RBP14.24□□□□□ -0.13
CDC42EP3-206ENST00000611976 LAS1LQ9Y4W2 734 aaKnown RBP14.24□□□□□ -0.13
CDC42EP3-206ENST00000611976 ERICH3Q5RHP9 1530 aa14.24□□□□□ -0.13
CDC42EP3-206ENST00000611976 NPM1P06748 294 aaKnown RBP eCLIP14.24□□□□□ -0.13
CDC42EP3-206ENST00000611976 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
CDC42EP3-206ENST00000611976 CFAP53Q96M91 514 aa14.24□□□□□ -0.13
CDC42EP3-206ENST00000611976 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
CDC42EP3-206ENST00000611976 TMF1P82094 1093 aa14.23□□□□□ -0.13
CDC42EP3-206ENST00000611976 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
CDC42EP3-206ENST00000611976 RALBP1Q15311 655 aa14.22□□□□□ -0.13
CDC42EP3-206ENST00000611976 KTN1Q86UP2 1357 aaKnown RBP14.22□□□□□ -0.13
CDC42EP3-206ENST00000611976 CCDC18Q5T9S5 1454 aa14.21□□□□□ -0.13
CDC42EP3-206ENST00000611976 NUDCQ9Y266 331 aa14.21□□□□□ -0.13
CDC42EP3-206ENST00000611976 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
CDC42EP3-206ENST00000611976 MYH16Q9H6N6 1097 aa14.21□□□□□ -0.13
CDC42EP3-206ENST00000611976 PKD2Q13563 968 aa14.21□□□□□ -0.13
CDC42EP3-206ENST00000611976 FOXD1Q16676 465 aa14.21□□□□□ -0.14
CDC42EP3-206ENST00000611976 L3MBTL2Q969R5 705 aa14.21□□□□□ -0.14
CDC42EP3-206ENST00000611976 ARXQ96QS3 562 aa14.19□□□□□ -0.14
CDC42EP3-206ENST00000611976 ROCK2O75116 1388 aaKnown RBP14.19□□□□□ -0.14
CDC42EP3-206ENST00000611976 RRBP1Q9P2E9 1410 aaKnown RBP14.19□□□□□ -0.14
CDC42EP3-206ENST00000611976 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
CDC42EP3-206ENST00000611976 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
CDC42EP3-206ENST00000611976 ANKRD30AQ9BXX3 1397 aa14.18□□□□□ -0.14
CDC42EP3-206ENST00000611976 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
CDC42EP3-206ENST00000611976 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
CDC42EP3-206ENST00000611976 RGS3P49796 1198 aa14.17□□□□□ -0.14
CDC42EP3-206ENST00000611976 RCAN3Q9UKA8 241 aa14.17□□□□□ -0.14
CDC42EP3-206ENST00000611976 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
CDC42EP3-206ENST00000611976 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
CDC42EP3-206ENST00000611976 FTSJ3Q8IY81 847 aaKnown RBP14.14□□□□□ -0.15
CDC42EP3-206ENST00000611976 GOLGA6L22H0YM25 854 aa14.14□□□□□ -0.15
CDC42EP3-206ENST00000611976 ZBED9Q6R2W3 1325 aa14.14□□□□□ -0.15
CDC42EP3-206ENST00000611976 IGF1RP08069 1367 aa14.13□□□□□ -0.15
CDC42EP3-206ENST00000611976 IPO9Q96P70 1041 aaKnown RBP14.13□□□□□ -0.15
CDC42EP3-206ENST00000611976 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
CDC42EP3-206ENST00000611976 CUX1P39880 1505 aa14.13□□□□□ -0.15
CDC42EP3-206ENST00000611976 MS4A1P11836 297 aa14.13□□□□□ -0.15
CDC42EP3-206ENST00000611976 FANCIQ9NVI1 1328 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms