RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 NUP160Q12769 1436 aa19.65■□□□□ 0.74
CLK4-215ENST00000611733 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
CLK4-215ENST00000611733 KIAA0586Q9BVV6 1533 aa19.57■□□□□ 0.72
CLK4-215ENST00000611733 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
CLK4-215ENST00000611733 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
CLK4-215ENST00000611733 JPH4Q96JJ6 628 aa19.53■□□□□ 0.72
CLK4-215ENST00000611733 CTTNBP2Q8WZ74 1663 aa19.51■□□□□ 0.71
CLK4-215ENST00000611733 IQGAP2Q13576 1575 aa19.5■□□□□ 0.71
CLK4-215ENST00000611733 P3H3Q8IVL6 736 aa19.46■□□□□ 0.71
CLK4-215ENST00000611733 PRG4Q92954 1404 aaPredicted RBP19.43■□□□□ 0.7
CLK4-215ENST00000611733 ERCC6L2Q5T890 1561 aa19.41■□□□□ 0.7
CLK4-215ENST00000611733 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
CLK4-215ENST00000611733 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
CLK4-215ENST00000611733 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
CLK4-215ENST00000611733 DISP1Q96F81 1524 aa19.39■□□□□ 0.7
CLK4-215ENST00000611733 CLIP1P30622 1438 aa19.38■□□□□ 0.69
CLK4-215ENST00000611733 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
CLK4-215ENST00000611733 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
CLK4-215ENST00000611733 SAMD9Q5K651 1589 aa19.33■□□□□ 0.68
CLK4-215ENST00000611733 FHOD3Q2V2M9 1422 aa19.33■□□□□ 0.68
CLK4-215ENST00000611733 CARMIL2Q6F5E8 1435 aa19.32■□□□□ 0.68
CLK4-215ENST00000611733 KIAA0556O60303 1618 aa19.32■□□□□ 0.68
CLK4-215ENST00000611733 ARAP1Q96P48 1450 aa19.3■□□□□ 0.68
CLK4-215ENST00000611733 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
CLK4-215ENST00000611733 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
CLK4-215ENST00000611733 EFCAB5A4FU69 1503 aa19.28■□□□□ 0.68
CLK4-215ENST00000611733 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
CLK4-215ENST00000611733 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
CLK4-215ENST00000611733 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
CLK4-215ENST00000611733 PTPRGP23470 1445 aa19.24■□□□□ 0.67
CLK4-215ENST00000611733 CYB5RLQ6IPT4 315 aa19.2■□□□□ 0.66
CLK4-215ENST00000611733 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
CLK4-215ENST00000611733 ATP1B4Q9UN42 357 aaPredicted RBP19.14■□□□□ 0.65
CLK4-215ENST00000611733 FMN1Q68DA7 1419 aa19.14■□□□□ 0.65
CLK4-215ENST00000611733 ARID3CA6NKF2 412 aa19.13■□□□□ 0.65
CLK4-215ENST00000611733 VPS8Q8N3P4 1428 aa19.12■□□□□ 0.65
CLK4-215ENST00000611733 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
CLK4-215ENST00000611733 ABCA8O94911 1581 aa19.09■□□□□ 0.65
CLK4-215ENST00000611733 PCF11O94913 1555 aaKnown RBP19.07■□□□□ 0.64
CLK4-215ENST00000611733 CASKIN1Q8WXD9 1431 aa19.07■□□□□ 0.64
CLK4-215ENST00000611733 RAPGEF6Q8TEU7 1601 aa19.06■□□□□ 0.64
CLK4-215ENST00000611733 NUP153P49790 1475 aaKnown RBP19.05■□□□□ 0.64
CLK4-215ENST00000611733 ADCY10Q96PN6 1610 aa19.04■□□□□ 0.64
CLK4-215ENST00000611733 ABCC2Q92887 1545 aa19.03■□□□□ 0.64
CLK4-215ENST00000611733 UHRF1BP1LA0JNW5 1464 aa19.02■□□□□ 0.63
CLK4-215ENST00000611733 FYCO1Q9BQS8 1478 aa19.01■□□□□ 0.63
CLK4-215ENST00000611733 ATP10BO94823 1461 aa19■□□□□ 0.63
CLK4-215ENST00000611733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
CLK4-215ENST00000611733 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
CLK4-215ENST00000611733 CDK13Q14004 1512 aaKnown RBP18.99■□□□□ 0.63
CLK4-215ENST00000611733 LRRIQ1Q96JM4 1722 aa18.98■□□□□ 0.63
CLK4-215ENST00000611733 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
CLK4-215ENST00000611733 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
CLK4-215ENST00000611733 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
CLK4-215ENST00000611733 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
CLK4-215ENST00000611733 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLK4-215ENST00000611733 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
CLK4-215ENST00000611733 ZCCHC11Q5TAX3 1644 aaKnown RBP18.91■□□□□ 0.62
CLK4-215ENST00000611733 APLP2Q06481 763 aa18.91■□□□□ 0.62
CLK4-215ENST00000611733 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.61
CLK4-215ENST00000611733 MAGI3Q5TCQ9 1506 aa18.87■□□□□ 0.61
CLK4-215ENST00000611733 TIAM1Q13009 1591 aa18.87■□□□□ 0.61
CLK4-215ENST00000611733 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
CLK4-215ENST00000611733 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
CLK4-215ENST00000611733 ASXL2Q76L83 1435 aa18.85■□□□□ 0.61
CLK4-215ENST00000611733 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.61
CLK4-215ENST00000611733 MAP3K1Q13233 1512 aa18.83■□□□□ 0.6
CLK4-215ENST00000611733 CFAP43Q8NDM7 1665 aa18.82■□□□□ 0.6
CLK4-215ENST00000611733 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
CLK4-215ENST00000611733 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
CLK4-215ENST00000611733 TROQ12816 1431 aaPredicted RBP18.79■□□□□ 0.6
CLK4-215ENST00000611733 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
CLK4-215ENST00000611733 MAPKBP1O60336 1514 aa18.77■□□□□ 0.6
CLK4-215ENST00000611733 KIF14Q15058 1648 aa18.73■□□□□ 0.59
CLK4-215ENST00000611733 EHBP1L1Q8N3D4 1523 aa18.73■□□□□ 0.59
CLK4-215ENST00000611733 FAM69CQ0P6D2 419 aa18.71■□□□□ 0.59
CLK4-215ENST00000611733 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
CLK4-215ENST00000611733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLK4-215ENST00000611733 ABCC10Q5T3U5 1492 aa18.68■□□□□ 0.58
CLK4-215ENST00000611733 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
CLK4-215ENST00000611733 TTC37Q6PGP7 1564 aa18.65■□□□□ 0.58
CLK4-215ENST00000611733 TRHP20396 242 aaPredicted RBP18.65■□□□□ 0.58
CLK4-215ENST00000611733 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
CLK4-215ENST00000611733 SUPT6HQ7KZ85 1726 aaKnown RBP18.64■□□□□ 0.58
CLK4-215ENST00000611733 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
CLK4-215ENST00000611733 GPATCH8Q9UKJ3 1502 aaKnown RBP18.61■□□□□ 0.57
CLK4-215ENST00000611733 ABCA9Q8IUA7 1624 aa18.6■□□□□ 0.57
CLK4-215ENST00000611733 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
CLK4-215ENST00000611733 GLI2P10070 1586 aa18.6■□□□□ 0.57
CLK4-215ENST00000611733 KIF13AQ9H1H9 1805 aa18.59■□□□□ 0.57
CLK4-215ENST00000611733 PLCH2O75038 1416 aa18.57■□□□□ 0.56
CLK4-215ENST00000611733 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
CLK4-215ENST00000611733 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
CLK4-215ENST00000611733 CFDP1Q9UEE9 299 aaPredicted RBP18.57■□□□□ 0.56
CLK4-215ENST00000611733 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
CLK4-215ENST00000611733 CDC42BPAQ5VT25 1732 aa18.55■□□□□ 0.56
CLK4-215ENST00000611733 MAP3K4Q9Y6R4 1608 aa18.55■□□□□ 0.56
CLK4-215ENST00000611733 CDC42BPBQ9Y5S2 1711 aa18.53■□□□□ 0.56
CLK4-215ENST00000611733 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.55
CLK4-215ENST00000611733 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms